RNA–Protein interactions for RNA: ENST00000535990.5

CLPB-206, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-206ENST00000535990 NISCHQ9Y2I1 1504 aa37.55■■■■□ 3.6
CLPB-206ENST00000535990 SHROOM4Q9ULL8 1493 aa32.29■■■□□ 2.76
CLPB-206ENST00000535990 CCDC180Q9P1Z9 1646 aa31.83■■■□□ 2.69
CLPB-206ENST00000535990 ZCCHC6Q5VYS8 1495 aaKnown RBP31.81■■■□□ 2.68
CLPB-206ENST00000535990 SUPT5HO00267 1087 aaKnown RBP31.81■■■□□ 2.68
CLPB-206ENST00000535990 DCAF8L2P0C7V8 631 aa31.13■■■□□ 2.57
CLPB-206ENST00000535990 CHIC1Q5VXU3 224 aa31.02■■■□□ 2.56
CLPB-206ENST00000535990 MYO15BQ96JP2 1530 aa31.01■■■□□ 2.56
CLPB-206ENST00000535990 DCAF1Q9Y4B6 1507 aa30.77■■■□□ 2.52
CLPB-206ENST00000535990 HRCP23327 699 aa30.6■■■□□ 2.49
CLPB-206ENST00000535990 PCGF6Q9BYE7 350 aa30.42■■■□□ 2.46
CLPB-206ENST00000535990 LOC105371045A0A1W2PR82 267 aa30.15■■■□□ 2.42
CLPB-206ENST00000535990 ABCC9O60706 1549 aa30.1■■■□□ 2.41
CLPB-206ENST00000535990 PPARGC1BQ86YN6 1023 aaKnown RBP29.94■■■□□ 2.38
CLPB-206ENST00000535990 SCRIBQ14160 1630 aa29.92■■■□□ 2.38
CLPB-206ENST00000535990 RSF1Q96T23 1441 aaPredicted RBP29.82■■■□□ 2.36
CLPB-206ENST00000535990 TRIM26Q12899 539 aaPredicted RBP29.75■■■□□ 2.35
CLPB-206ENST00000535990 RB1CC1Q8TDY2 1594 aa29.61■■■□□ 2.33
CLPB-206ENST00000535990 TRIM41Q8WV44 630 aa29.59■■■□□ 2.33
CLPB-206ENST00000535990 FAM9AQ8IZU1 332 aaPredicted RBP29.39■■■□□ 2.3
CLPB-206ENST00000535990 NACADO15069 1562 aa29.32■■■□□ 2.28
CLPB-206ENST00000535990 CECR2Q9BXF3 1484 aa29.28■■■□□ 2.28
CLPB-206ENST00000535990 ZEB1P37275 1124 aaPredicted RBP29.24■■■□□ 2.27
CLPB-206ENST00000535990 MROH2BQ7Z745 1585 aa29.22■■■□□ 2.27
CLPB-206ENST00000535990 EHMT2Q96KQ7 1210 aa29.17■■■□□ 2.26
CLPB-206ENST00000535990 WIZO95785 1651 aa29.14■■■□□ 2.26
CLPB-206ENST00000535990 BAZ1AQ9NRL2 1556 aaPredicted RBP28.95■■■□□ 2.22
CLPB-206ENST00000535990 EIF4G1Q04637 1599 aaKnown RBP28.82■■■□□ 2.2
CLPB-206ENST00000535990 TOP2AP11388 1531 aaKnown RBP28.63■■■□□ 2.17
CLPB-206ENST00000535990 ABCC8Q09428 1581 aa28.59■■■□□ 2.17
CLPB-206ENST00000535990 SMARCA4P51532 1647 aa28.57■■■□□ 2.16
CLPB-206ENST00000535990 CCDC88BA6NC98 1476 aa28.52■■■□□ 2.16
CLPB-206ENST00000535990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.52■■■□□ 2.16
CLPB-206ENST00000535990 SMARCA2P51531 1590 aa28.5■■■□□ 2.15
CLPB-206ENST00000535990 UNC13AQ9UPW8 1703 aa28.5■■■□□ 2.15
CLPB-206ENST00000535990 CCER1Q8TC90 406 aaPredicted RBP28.48■■■□□ 2.15
CLPB-206ENST00000535990 SCAF1Q9H7N4 1312 aaKnown RBP28.39■■■□□ 2.13
CLPB-206ENST00000535990 WRNQ14191 1432 aaPredicted RBP eCLIP28.37■■■□□ 2.13
CLPB-206ENST00000535990 CEP162Q5TB80 1403 aa28.36■■■□□ 2.13
CLPB-206ENST00000535990 SOGA1O94964 1423 aa28.34■■■□□ 2.13
CLPB-206ENST00000535990 TTBK1Q5TCY1 1321 aaPredicted RBP28.3■■■□□ 2.12
CLPB-206ENST00000535990 TNIKQ9UKE5 1360 aa28.27■■■□□ 2.12
CLPB-206ENST00000535990 EEA1Q15075 1411 aa28.22■■■□□ 2.11
CLPB-206ENST00000535990 CSRNP3Q8WYN3 585 aa28.2■■■□□ 2.1
CLPB-206ENST00000535990 RUSC2Q8N2Y8 1516 aa28.19■■■□□ 2.1
CLPB-206ENST00000535990 UBTFP17480 764 aaKnown RBP28.16■■■□□ 2.1
CLPB-206ENST00000535990 PELP1Q8IZL8 1130 aaKnown RBP28.15■■■□□ 2.1
CLPB-206ENST00000535990 GOLGA3Q08378 1498 aa28.08■■■□□ 2.09
CLPB-206ENST00000535990 DIEXFQ68CQ4 756 aaKnown RBP28.08■■■□□ 2.09
CLPB-206ENST00000535990 ACIN1Q9UKV3 1341 aaKnown RBP28.03■■■□□ 2.08
CLPB-206ENST00000535990 PABPN1Q86U42 306 aaKnown RBP eCLIP28.02■■■□□ 2.08
CLPB-206ENST00000535990 BICRAQ9NZM4 1560 aa28.01■■■□□ 2.07
CLPB-206ENST00000535990 NEUROD1Q13562 356 aa27.96■■■□□ 2.07
CLPB-206ENST00000535990 PEG3Q9GZU2 1588 aa27.96■■■□□ 2.07
CLPB-206ENST00000535990 SYNJ1O43426 1573 aa27.91■■■□□ 2.06
CLPB-206ENST00000535990 CEP164Q9UPV0 1460 aa27.88■■■□□ 2.05
CLPB-206ENST00000535990 KIF21BO75037 1637 aa27.87■■■□□ 2.05
CLPB-206ENST00000535990 CENPBP07199 599 aaPredicted RBP27.85■■■□□ 2.05
CLPB-206ENST00000535990 ZNF316A6NFI3 1004 aaPredicted RBP27.79■■■□□ 2.04
CLPB-206ENST00000535990 CLIP1P30622 1438 aa27.77■■■□□ 2.04
CLPB-206ENST00000535990 GTF3C3Q9Y5Q9 886 aa27.73■■■□□ 2.03
CLPB-206ENST00000535990 ATAD2BQ9ULI0 1458 aa27.72■■■□□ 2.03
CLPB-206ENST00000535990 HNRNPUL2Q1KMD3 747 aaKnown RBP27.72■■■□□ 2.03
CLPB-206ENST00000535990 BAZ1BQ9UIG0 1483 aaKnown RBP27.69■■■□□ 2.02
CLPB-206ENST00000535990 VPS8Q8N3P4 1428 aa27.68■■■□□ 2.02
CLPB-206ENST00000535990 RAPGEF2Q9Y4G8 1499 aa27.63■■■□□ 2.01
CLPB-206ENST00000535990 APLP2Q06481 763 aa27.61■■■□□ 2.01
CLPB-206ENST00000535990 RANGAP1P46060 587 aaPredicted RBP27.56■■■□□ 2
CLPB-206ENST00000535990 TOP2BQ02880 1626 aa27.53■■■□□ 2
CLPB-206ENST00000535990 YTHDC1Q96MU7 727 aaKnown RBP27.47■■□□□ 1.99
CLPB-206ENST00000535990 BIVM-ERCC5R4GMW8 1640 aa27.44■■□□□ 1.98
CLPB-206ENST00000535990 MIER1Q8N108 512 aa27.43■■□□□ 1.98
CLPB-206ENST00000535990 ERICH3Q5RHP9 1530 aa27.35■■□□□ 1.97
CLPB-206ENST00000535990 PRXQ9BXM0 1461 aa27.29■■□□□ 1.96
CLPB-206ENST00000535990 ARAP1Q96P48 1450 aa27.28■■□□□ 1.96
CLPB-206ENST00000535990 CLSPNQ9HAW4 1339 aa27.19■■□□□ 1.94
CLPB-206ENST00000535990 CUX1P39880 1505 aa27.19■■□□□ 1.94
CLPB-206ENST00000535990 DHX57Q6P158 1386 aaKnown RBP27.18■■□□□ 1.94
CLPB-206ENST00000535990 KANK4Q5T7N3 995 aaPredicted RBP27.18■■□□□ 1.94
CLPB-206ENST00000535990 HMGXB3Q12766 1538 aa27.15■■□□□ 1.94
CLPB-206ENST00000535990 KIF27Q86VH2 1401 aa27.13■■□□□ 1.93
CLPB-206ENST00000535990 NCAPD3P42695 1498 aa27.1■■□□□ 1.93
CLPB-206ENST00000535990 RRBP1Q9P2E9 1410 aaKnown RBP27.06■■□□□ 1.92
CLPB-206ENST00000535990 CFTRP13569 1480 aa26.99■■□□□ 1.91
CLPB-206ENST00000535990 ARHGAP35Q9NRY4 1499 aa26.99■■□□□ 1.91
CLPB-206ENST00000535990 CCNB3Q8WWL7 1395 aa26.95■■□□□ 1.9
CLPB-206ENST00000535990 CUX2O14529 1486 aa26.94■■□□□ 1.9
CLPB-206ENST00000535990 PRDM2Q13029 1718 aa26.92■■□□□ 1.9
CLPB-206ENST00000535990 ITGAEP38570 1179 aa26.89■■□□□ 1.89
CLPB-206ENST00000535990 IGF1RP08069 1367 aa26.79■■□□□ 1.88
CLPB-206ENST00000535990 TIAM1Q13009 1591 aa26.78■■□□□ 1.88
CLPB-206ENST00000535990 MYT1Q01538 1121 aa26.78■■□□□ 1.88
CLPB-206ENST00000535990 RAB3GAP2Q9H2M9 1393 aa26.75■■□□□ 1.87
CLPB-206ENST00000535990 MAP3K1Q13233 1512 aa26.73■■□□□ 1.87
CLPB-206ENST00000535990 CARMIL1Q5VZK9 1371 aa26.7■■□□□ 1.86
CLPB-206ENST00000535990 MAPKBP1O60336 1514 aa26.69■■□□□ 1.86
CLPB-206ENST00000535990 FGD5Q6ZNL6 1462 aa26.66■■□□□ 1.86
CLPB-206ENST00000535990 LRRC9Q6ZRR7 1453 aa26.66■■□□□ 1.86
CLPB-206ENST00000535990 SETD5Q9C0A6 1442 aa26.64■■□□□ 1.86
CLPB-206ENST00000535990 SUPT16HQ9Y5B9 1047 aaKnown RBP26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms