RNA–Protein interactions for RNA: ENST00000517671.5

NPM1-204, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-204ENST00000517671 AEBP2Q6ZN18 517 aaPredicted RBP31.75■■■□□ 2.67
NPM1-204ENST00000517671 CHIC1Q5VXU3 224 aa29.87■■■□□ 2.37
NPM1-204ENST00000517671 SENP3Q9H4L4 574 aaPredicted RBP27.14■■□□□ 1.93
NPM1-204ENST00000517671 PHF23Q9BUL5 403 aaPredicted RBP26.76■■□□□ 1.87
NPM1-204ENST00000517671 FOXD1Q16676 465 aa25.34■■□□□ 1.65
NPM1-204ENST00000517671 PLPPR3Q6T4P5 718 aa24.04■■□□□ 1.44
NPM1-204ENST00000517671 MSH5O43196 834 aa23.83■■□□□ 1.4
NPM1-204ENST00000517671 POTEDQ86YR6 584 aa23.78■■□□□ 1.4
NPM1-204ENST00000517671 PIAS4Q8N2W9 510 aaPredicted RBP23.6■■□□□ 1.37
NPM1-204ENST00000517671 PPP6R1Q9UPN7 881 aa23.46■■□□□ 1.35
NPM1-204ENST00000517671 ADRA2BP18089 450 aa23.36■■□□□ 1.33
NPM1-204ENST00000517671 MAPK8IP2Q13387 824 aaPredicted RBP21.55■■□□□ 1.04
NPM1-204ENST00000517671 DMRT2Q9Y5R5 561 aa21.47■■□□□ 1.03
NPM1-204ENST00000517671 SCAF1Q9H7N4 1312 aaKnown RBP21.4■■□□□ 1.02
NPM1-204ENST00000517671 PPP4R3CPQ6ZMV5 832 aa21.15■□□□□ 0.98
NPM1-204ENST00000517671 NCBP3Q53F19 620 aaKnown RBP20.69■□□□□ 0.9
NPM1-204ENST00000517671 CACNB1Q02641 598 aaPredicted RBP20.65■□□□□ 0.9
NPM1-204ENST00000517671 DCAF8L1A6NGE4 600 aa20.62■□□□□ 0.89
NPM1-204ENST00000517671 KCNA4P22459 653 aa20.61■□□□□ 0.89
NPM1-204ENST00000517671 CNKSR2Q8WXI2 1034 aa20.58■□□□□ 0.89
NPM1-204ENST00000517671 HOXD11P31277 338 aaPredicted RBP20.57■□□□□ 0.88
NPM1-204ENST00000517671 RNF216Q9NWF9 866 aaPredicted RBP20.33■□□□□ 0.85
NPM1-204ENST00000517671 RNF39Q9H2S5 420 aa20.3■□□□□ 0.84
NPM1-204ENST00000517671 NPM3O75607 178 aaKnown RBP20.27■□□□□ 0.83
NPM1-204ENST00000517671 C1QBPQ07021 282 aaKnown RBP20■□□□□ 0.79
NPM1-204ENST00000517671 DNAJC5BQ9UF47 199 aa19.92■□□□□ 0.78
NPM1-204ENST00000517671 SLC4A1APQ9BWU0 796 aaKnown RBP19.7■□□□□ 0.74
NPM1-204ENST00000517671 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.6■□□□□ 0.734e-10■■□□□ 12.1
NPM1-204ENST00000517671 NISCHQ9Y2I1 1504 aa19.45■□□□□ 0.7
NPM1-204ENST00000517671 U3KPZ7 1027 aaPredicted RBP19.15■□□□□ 0.66
NPM1-204ENST00000517671 EHMT2Q96KQ7 1210 aa19.14■□□□□ 0.65
NPM1-204ENST00000517671 SLC4A2P04920 1241 aa19.09■□□□□ 0.65
NPM1-204ENST00000517671 FOXD4L1Q9NU39 408 aa19.02■□□□□ 0.64
NPM1-204ENST00000517671 SPINK5Q9NQ38 1064 aaPredicted RBP18.97■□□□□ 0.63
NPM1-204ENST00000517671 CAPN15O75808 1086 aa18.96■□□□□ 0.63
NPM1-204ENST00000517671 DSG3P32926 999 aa18.92■□□□□ 0.62
NPM1-204ENST00000517671 ZBTB22O15209 634 aa18.89■□□□□ 0.61
NPM1-204ENST00000517671 CSRNP3Q8WYN3 585 aa18.85■□□□□ 0.61
NPM1-204ENST00000517671 MYCNP04198 464 aaPredicted RBP18.77■□□□□ 0.6
NPM1-204ENST00000517671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.7■□□□□ 0.58
NPM1-204ENST00000517671 HNRNPUL2Q1KMD3 747 aaKnown RBP18.7■□□□□ 0.58
NPM1-204ENST00000517671 APLP2Q06481 763 aa18.6■□□□□ 0.57
NPM1-204ENST00000517671 SAMD1Q6SPF0 538 aaPredicted RBP18.59■□□□□ 0.57
NPM1-204ENST00000517671 TRHP20396 242 aaPredicted RBP18.58■□□□□ 0.57
NPM1-204ENST00000517671 POTEHQ6S545 545 aa18.58■□□□□ 0.57
NPM1-204ENST00000517671 ZNF219Q9P2Y4 722 aaPredicted RBP18.53■□□□□ 0.56
NPM1-204ENST00000517671 ABCB7O75027 752 aa18.49■□□□□ 0.55
NPM1-204ENST00000517671 ATXN8OSP0DMR3 200 aa18.38■□□□□ 0.53
NPM1-204ENST00000517671 ATF5Q9Y2D1 282 aaPredicted RBP18.18■□□□□ 0.5
NPM1-204ENST00000517671 RBM42Q9BTD8 480 aaKnown RBP18.06■□□□□ 0.48
NPM1-204ENST00000517671 POLA2Q14181 598 aa18.01■□□□□ 0.47
NPM1-204ENST00000517671 CHRDL2Q6WN34 429 aa17.78■□□□□ 0.44
NPM1-204ENST00000517671 ABCC9O60706 1549 aa17.74■□□□□ 0.43
NPM1-204ENST00000517671 ZBTB12Q9Y330 459 aaPredicted RBP17.64■□□□□ 0.41
NPM1-204ENST00000517671 FBLN2P98095 1184 aa17.58■□□□□ 0.4
NPM1-204ENST00000517671 AKT1S1Q96B36 256 aa17.58■□□□□ 0.4
NPM1-204ENST00000517671 CCDC180Q9P1Z9 1646 aa17.5■□□□□ 0.39
NPM1-204ENST00000517671 OSCARQ8IYS5 282 aa17.44■□□□□ 0.38
NPM1-204ENST00000517671 REM2Q8IYK8 340 aaPredicted RBP17.41■□□□□ 0.38
NPM1-204ENST00000517671 MKRN4PQ13434 485 aaPredicted RBP17.38■□□□□ 0.37
NPM1-204ENST00000517671 PIP4P2Q8N4L2 257 aa17.29■□□□□ 0.36
NPM1-204ENST00000517671 SP7Q8TDD2 431 aaPredicted RBP17.27■□□□□ 0.36
NPM1-204ENST00000517671 PITPNM1O00562 1244 aa17.22■□□□□ 0.35
NPM1-204ENST00000517671 FXR2P51116 673 aaKnown RBP eCLIP17.15■□□□□ 0.34
NPM1-204ENST00000517671 SPDYE2BA6NHP3 402 aa17.12■□□□□ 0.33
NPM1-204ENST00000517671 SPDYE6P0CI01 402 aa17.12■□□□□ 0.33
NPM1-204ENST00000517671 FKBP8Q14318 412 aa17.12■□□□□ 0.33
NPM1-204ENST00000517671 SPDYE2Q495Y8 402 aa17.12■□□□□ 0.33
NPM1-204ENST00000517671 SPDYE4A6NLX3 237 aa17.1■□□□□ 0.33
NPM1-204ENST00000517671 HAX1O00165 279 aa17.08■□□□□ 0.32
NPM1-204ENST00000517671 ZNF692Q9BU19 519 aaPredicted RBP17.08■□□□□ 0.32
NPM1-204ENST00000517671 SSUH2Q9Y2M2 353 aa16.91■□□□□ 0.3
NPM1-204ENST00000517671 RB1CC1Q8TDY2 1594 aa16.86■□□□□ 0.29
NPM1-204ENST00000517671 EVX2Q03828 476 aa16.83■□□□□ 0.28
NPM1-204ENST00000517671 SPDYE1Q8NFV5 336 aaPredicted RBP16.83■□□□□ 0.28
NPM1-204ENST00000517671 CLEC11AQ9Y240 323 aa16.83■□□□□ 0.28
NPM1-204ENST00000517671 PABPN1Q86U42 306 aaKnown RBP eCLIP16.82■□□□□ 0.28
NPM1-204ENST00000517671 PRKAR2AP13861 404 aaKnown RBP16.78■□□□□ 0.28
NPM1-204ENST00000517671 NACADO15069 1562 aa16.72■□□□□ 0.27
NPM1-204ENST00000517671 PROM2Q8N271 834 aa16.7■□□□□ 0.26
NPM1-204ENST00000517671 DCAF8L2P0C7V8 631 aa16.62■□□□□ 0.25
NPM1-204ENST00000517671 STAG3Q9UJ98 1225 aa16.62■□□□□ 0.25
NPM1-204ENST00000517671 C19orf67A6NJJ6 358 aa16.6■□□□□ 0.25
NPM1-204ENST00000517671 FBXO3Q9UK99 471 aa16.58■□□□□ 0.24
NPM1-204ENST00000517671 CHADLQ6NUI6 762 aa16.53■□□□□ 0.24
NPM1-204ENST00000517671 PRR29P0C7W0 189 aa16.51■□□□□ 0.23
NPM1-204ENST00000517671 MYO15BQ96JP2 1530 aa16.48■□□□□ 0.23
NPM1-204ENST00000517671 GABBR2O75899 941 aa16.45■□□□□ 0.22
NPM1-204ENST00000517671 PLEKHG5O94827 1062 aa16.28■□□□□ 0.2
NPM1-204ENST00000517671 MIER1Q8N108 512 aa16.28■□□□□ 0.2
NPM1-204ENST00000517671 VASPP50552 380 aaPredicted RBP16.26■□□□□ 0.19
NPM1-204ENST00000517671 PLCD3Q8N3E9 789 aa16.26■□□□□ 0.19
NPM1-204ENST00000517671 SHROOM4Q9ULL8 1493 aa16.26■□□□□ 0.19
NPM1-204ENST00000517671 FARP1Q9Y4F1 1045 aaPredicted RBP16.25■□□□□ 0.19
NPM1-204ENST00000517671 BICRAQ9NZM4 1560 aa16.23■□□□□ 0.19
NPM1-204ENST00000517671 CD44P16070 742 aaKnown RBP16.23■□□□□ 0.19
NPM1-204ENST00000517671 LHX8Q68G74 356 aa16.2■□□□□ 0.18
NPM1-204ENST00000517671 UNC13AQ9UPW8 1703 aa16.17■□□□□ 0.18
NPM1-204ENST00000517671 DCAF1Q9Y4B6 1507 aa16.14■□□□□ 0.17
NPM1-204ENST00000517671 CREBZFQ9NS37 354 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms