Protein–RNA interactions for Protein: Q8IWS0

PHF6, PHD finger protein 6, humanhuman

Known RBP eCLIP

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF6Q8IWS0 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC11.5□□□□□ -0.571e-6■■■■□ 20.1
PHF6Q8IWS0 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.591e-6■■■■□ 20.1
PHF6Q8IWS0 snoU2_19.4-201ENST00000364329 80 ntBASIC3.66□□□□□ -1.825e-47■■■■□ 20
PHF6Q8IWS0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.563e-6■■■■□ 20
PHF6Q8IWS0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.273e-6■■■■□ 20
PHF6Q8IWS0 RABL6-210ENST00000484471 2746 ntTSL 519.1■□□□□ 0.653e-6■■■■□ 20
PHF6Q8IWS0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.313e-6■■■■□ 20
PHF6Q8IWS0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.213e-6■■■■□ 20
PHF6Q8IWS0 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC13.87□□□□□ -0.193e-6■■■■□ 20
PHF6Q8IWS0 ACTB-212ENST00000484841 1032 ntTSL 523.48■■□□□ 1.357e-13■■■■□ 19.9
PHF6Q8IWS0 ACTB-211ENST00000480301 657 ntTSL 1 (best)23.06■■□□□ 1.287e-13■■■■□ 19.9
PHF6Q8IWS0 ACTB-210ENST00000477812 820 ntTSL 220.78■□□□□ 0.927e-13■■■■□ 19.9
PHF6Q8IWS0 ACTB-205ENST00000432588 568 ntTSL 419.01■□□□□ 0.637e-13■■■■□ 19.9
PHF6Q8IWS0 ACTB-202ENST00000414620 561 ntTSL 418.02■□□□□ 0.487e-13■■■■□ 19.9
PHF6Q8IWS0 ACTB-206ENST00000443528 569 ntTSL 417.2■□□□□ 0.347e-13■■■■□ 19.9
PHF6Q8IWS0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.327e-13■■■■□ 19.9
PHF6Q8IWS0 ACTB-207ENST00000462494 2245 ntTSL 516.23■□□□□ 0.197e-13■■■■□ 19.9
PHF6Q8IWS0 ACTB-204ENST00000425660 1845 ntTSL 1 (best)14.47□□□□□ -0.097e-13■■■■□ 19.9
PHF6Q8IWS0 ACTB-209ENST00000473257 556 ntTSL 313.43□□□□□ -0.267e-13■■■■□ 19.9
PHF6Q8IWS0 PTBP1-209ENST00000586481 578 ntTSL 322.4■■□□□ 1.181e-7■■■■□ 19.9
PHF6Q8IWS0 PTBP1-214ENST00000589575 749 ntTSL 314.83□□□□□ -0.041e-7■■■■□ 19.9
PHF6Q8IWS0 PTBP1-216ENST00000590887 642 ntTSL 312.95□□□□□ -0.341e-7■■■■□ 19.9
PHF6Q8IWS0 MATR3-221ENST00000513121 573 ntTSL 221.78■■□□□ 1.083e-8■■■■□ 19.9
PHF6Q8IWS0 MATR3-222ENST00000513678 444 ntTSL 219.47■□□□□ 0.713e-8■■■■□ 19.9
PHF6Q8IWS0 MATR3-220ENST00000512876 575 ntTSL 319.47■□□□□ 0.713e-8■■■■□ 19.9
PHF6Q8IWS0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.44■□□□□ 0.73e-8■■■■□ 19.9
PHF6Q8IWS0 MATR3-208ENST00000504045 1530 ntTSL 518.95■□□□□ 0.623e-8■■■■□ 19.9
PHF6Q8IWS0 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.43e-8■■■■□ 19.9
PHF6Q8IWS0 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC9.19□□□□□ -0.943e-8■■■■□ 19.9
PHF6Q8IWS0 MATR3-212ENST00000507860 571 ntTSL 48.5□□□□□ -1.053e-8■■■■□ 19.9
PHF6Q8IWS0 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.073e-8■■■■□ 19.9
PHF6Q8IWS0 MATR3-218ENST00000511978 573 ntTSL 38.33□□□□□ -1.083e-8■■■■□ 19.9
PHF6Q8IWS0 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.37□□□□□ -1.233e-8■■■■□ 19.9
PHF6Q8IWS0 MATR3-209ENST00000504311 423 ntTSL 37.01□□□□□ -1.293e-8■■■■□ 19.9
PHF6Q8IWS0 MATR3-216ENST00000511249 447 ntTSL 46.06□□□□□ -1.443e-8■■■■□ 19.9
PHF6Q8IWS0 MATR3-214ENST00000509918 377 ntTSL 44.87□□□□□ -1.633e-8■■■■□ 19.9
PHF6Q8IWS0 SCARNA9-201ENST00000530422 353 ntBASIC8.72□□□□□ -1.011e-47■■■■□ 19.9
PHF6Q8IWS0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.591e-47■■■■□ 19.9
PHF6Q8IWS0 CEP295-203ENST00000530425 1735 ntAPPRIS ALT2 TSL 44.19□□□□□ -1.741e-47■■■■□ 19.9
PHF6Q8IWS0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.11□□□□□ -1.751e-47■■■■□ 19.9
PHF6Q8IWS0 SEMA7A-204ENST00000567345 674 ntTSL 423.6■■□□□ 1.376e-7■■■■□ 19.8
PHF6Q8IWS0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.05■□□□□ 0.486e-7■■■■□ 19.8
PHF6Q8IWS0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.186e-7■■■■□ 19.8
PHF6Q8IWS0 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.43□□□□□ -0.266e-7■■■■□ 19.8
PHF6Q8IWS0 OAZ1-203ENST00000586054 2832 nt21.69■■□□□ 1.061e-26■■■■□ 19.8
PHF6Q8IWS0 ARID3A-205ENST00000587532 1016 ntTSL 521.96■■□□□ 1.111e-6■■■■□ 19.7
PHF6Q8IWS0 ARID3A-202ENST00000457152 549 ntTSL 515.63■□□□□ 0.091e-6■■■■□ 19.7
PHF6Q8IWS0 CALM2-207ENST00000484408 682 ntTSL 521.27■■□□□ 19e-9■■■■□ 19.7
PHF6Q8IWS0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.949e-9■■■■□ 19.7
PHF6Q8IWS0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.49■□□□□ 0.879e-9■■■■□ 19.7
PHF6Q8IWS0 CALM2-208ENST00000489742 522 ntTSL 317.89■□□□□ 0.459e-9■■■■□ 19.7
PHF6Q8IWS0 CALM2-203ENST00000432899 1004 ntTSL 516.18■□□□□ 0.189e-9■■■■□ 19.7
PHF6Q8IWS0 CALM2-202ENST00000409563 770 ntTSL 5 BASIC12.03□□□□□ -0.489e-9■■■■□ 19.7
PHF6Q8IWS0 STPG4-206ENST00000422269 983 ntTSL 211.86□□□□□ -0.519e-9■■■■□ 19.7
PHF6Q8IWS0 CALM2-204ENST00000456319 703 ntTSL 28.41□□□□□ -1.069e-9■■■■□ 19.7
PHF6Q8IWS0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.19■■□□□ 1.942e-6■■■■□ 19.6
PHF6Q8IWS0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.892e-6■■■■□ 19.6
PHF6Q8IWS0 SSBP4-205ENST00000598159 747 ntTSL 326.3■■□□□ 1.82e-6■■■■□ 19.6
PHF6Q8IWS0 SSBP4-209ENST00000601357 606 ntTSL 525.95■■□□□ 1.742e-6■■■■□ 19.6
PHF6Q8IWS0 SSBP4-211ENST00000601614 628 ntTSL 219.93■□□□□ 0.782e-6■■■■□ 19.6
PHF6Q8IWS0 SSBP4-214ENST00000607020 504 ntTSL 318.48■□□□□ 0.552e-6■■■■□ 19.6
PHF6Q8IWS0 SSBP4-204ENST00000597724 865 ntTSL 518.43■□□□□ 0.542e-6■■■■□ 19.6
PHF6Q8IWS0 SSBP4-213ENST00000602088 622 ntTSL 518.43■□□□□ 0.542e-6■■■■□ 19.6
PHF6Q8IWS0 SSBP4-215ENST00000625926 162 ntTSL 5 BASIC12.38□□□□□ -0.432e-6■■■■□ 19.6
PHF6Q8IWS0 snoU2-30.2-201ENST00000362805 70 ntBASIC3.02□□□□□ -1.931e-323■■■■□ 19.5
PHF6Q8IWS0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.86■□□□□ 0.612e-6■■■■□ 19.5
PHF6Q8IWS0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.412e-6■■■■□ 19.5
PHF6Q8IWS0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.42e-6■■■■□ 19.5
PHF6Q8IWS0 LRRC41-205ENST00000498402 2068 ntTSL 216.79■□□□□ 0.282e-6■■■■□ 19.5
PHF6Q8IWS0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.82■□□□□ 0.122e-6■■■■□ 19.5
PHF6Q8IWS0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.69■□□□□ 0.12e-6■■■■□ 19.5
PHF6Q8IWS0 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.25□□□□□ -0.132e-6■■■■□ 19.5
PHF6Q8IWS0 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.142e-6■■■■□ 19.5
PHF6Q8IWS0 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.222e-6■■■■□ 19.5
PHF6Q8IWS0 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.93□□□□□ -0.342e-6■■■■□ 19.5
PHF6Q8IWS0 LRRC41-207ENST00000617190 4128 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.642e-6■■■■□ 19.5
PHF6Q8IWS0 CXXC5-209ENST00000507139 472 ntTSL 425.45■■□□□ 1.664e-6■■■■□ 19.4
PHF6Q8IWS0 CXXC5-206ENST00000504844 777 ntTSL 224.44■■□□□ 1.54e-6■■■■□ 19.4
PHF6Q8IWS0 CXXC5-203ENST00000502336 581 ntTSL 423.03■■□□□ 1.284e-6■■■■□ 19.4
PHF6Q8IWS0 CXXC5-202ENST00000502295 503 ntTSL 418.88■□□□□ 0.614e-6■■■■□ 19.4
PHF6Q8IWS0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.64e-6■■■■□ 19.4
PHF6Q8IWS0 CXXC5-216ENST00000520967 878 ntTSL 317.77■□□□□ 0.444e-6■■■■□ 19.4
PHF6Q8IWS0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.364e-6■■■■□ 19.4
PHF6Q8IWS0 CXXC5-207ENST00000504944 568 ntTSL 316.07■□□□□ 0.164e-6■■■■□ 19.4
PHF6Q8IWS0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.553e-10■■■■□ 19.4
PHF6Q8IWS0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.163e-10■■■■□ 19.4
PHF6Q8IWS0 SORCS2-204ENST00000511199 532 ntTSL 48.66□□□□□ -1.023e-10■■■■□ 19.4
PHF6Q8IWS0 TMC6-214ENST00000590162 517 ntTSL 217.16■□□□□ 0.341e-12■■■■□ 19.3
PHF6Q8IWS0 RPL4-213ENST00000566624 819 ntTSL 213.7□□□□□ -0.225e-49■■■■□ 19.3
PHF6Q8IWS0 RPL4-202ENST00000561554 580 ntTSL 413.53□□□□□ -0.245e-49■■■■□ 19.3
PHF6Q8IWS0 SNORD16-201ENST00000362803 99 ntBASIC6.54□□□□□ -1.365e-49■■■■□ 19.3
PHF6Q8IWS0 HNRNPF-203ENST00000357065 2617 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.629e-7■■■■□ 19.3
PHF6Q8IWS0 STXBP2-210ENST00000595950 552 ntTSL 525.39■■□□□ 1.667e-7■■■■□ 19.3
PHF6Q8IWS0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.11■□□□□ 0.817e-7■■■■□ 19.3
PHF6Q8IWS0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.82■□□□□ 0.767e-7■■■■□ 19.3
PHF6Q8IWS0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.767e-7■■■■□ 19.3
PHF6Q8IWS0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.737e-7■■■■□ 19.3
PHF6Q8IWS0 AC008763.2-201ENST00000598664 537 ntAPPRIS P5 TSL 518.03■□□□□ 0.487e-7■■■■□ 19.3
PHF6Q8IWS0 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.327e-7■■■■□ 19.3
PHF6Q8IWS0 STXBP2-211ENST00000597068 1785 ntTSL 1 (best)16.41■□□□□ 0.227e-7■■■■□ 19.3
Retrieved 100 of 4,170 protein–RNA pairs in 86.3 ms