RNA–Protein interactions for RNA: ENST00000260795.6

FGFR3-201, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGFR3, Length 4,132 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-201ENST00000260795 NISCHQ9Y2I1 1504 aa26.95■■□□□ 1.91
FGFR3-201ENST00000260795 DCAF8L2P0C7V8 631 aa26.05■■□□□ 1.76
FGFR3-201ENST00000260795 SHROOM4Q9ULL8 1493 aa24.86■■□□□ 1.57
FGFR3-201ENST00000260795 SUPT5HO00267 1087 aaKnown RBP24.77■■□□□ 1.56
FGFR3-201ENST00000260795 EHMT2Q96KQ7 1210 aa23.85■■□□□ 1.41
FGFR3-201ENST00000260795 CCDC180Q9P1Z9 1646 aa23.57■■□□□ 1.36
FGFR3-201ENST00000260795 PCGF6Q9BYE7 350 aa23.34■■□□□ 1.33
FGFR3-201ENST00000260795 FAM9AQ8IZU1 332 aaPredicted RBP23.31■■□□□ 1.32
FGFR3-201ENST00000260795 TTBK1Q5TCY1 1321 aaPredicted RBP22.86■■□□□ 1.25
FGFR3-201ENST00000260795 CHIC1Q5VXU3 224 aa22.81■■□□□ 1.24
FGFR3-201ENST00000260795 RANGAP1P46060 587 aaPredicted RBP22.73■■□□□ 1.23
FGFR3-201ENST00000260795 TRIM41Q8WV44 630 aa22.73■■□□□ 1.23
FGFR3-201ENST00000260795 ZCCHC6Q5VYS8 1495 aaKnown RBP22.73■■□□□ 1.23
FGFR3-201ENST00000260795 LOC105371045A0A1W2PR82 267 aa22.72■■□□□ 1.23
FGFR3-201ENST00000260795 ABCC9O60706 1549 aa22.72■■□□□ 1.23
FGFR3-201ENST00000260795 HRCP23327 699 aa22.6■■□□□ 1.21
FGFR3-201ENST00000260795 PPARGC1BQ86YN6 1023 aaKnown RBP22.52■■□□□ 1.2
FGFR3-201ENST00000260795 PABPN1Q86U42 306 aaKnown RBP eCLIP22.5■■□□□ 1.196e-7■■■□□ 14.8
FGFR3-201ENST00000260795 DCAF1Q9Y4B6 1507 aa22.42■■□□□ 1.18
FGFR3-201ENST00000260795 UBTFP17480 764 aaKnown RBP22.27■■□□□ 1.16
FGFR3-201ENST00000260795 TRIM26Q12899 539 aaPredicted RBP22.27■■□□□ 1.16
FGFR3-201ENST00000260795 APLP2Q06481 763 aa22.24■■□□□ 1.15
FGFR3-201ENST00000260795 CCER1Q8TC90 406 aaPredicted RBP22.19■■□□□ 1.14
FGFR3-201ENST00000260795 ZEB1P37275 1124 aaPredicted RBP22.13■■□□□ 1.13
FGFR3-201ENST00000260795 MYO15BQ96JP2 1530 aa22.12■■□□□ 1.13
FGFR3-201ENST00000260795 ATP1B4Q9UN42 357 aaPredicted RBP22.11■■□□□ 1.13
FGFR3-201ENST00000260795 NACADO15069 1562 aa21.81■■□□□ 1.08
FGFR3-201ENST00000260795 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.8■■□□□ 1.08
FGFR3-201ENST00000260795 YTHDC1Q96MU7 727 aaKnown RBP21.75■■□□□ 1.07
FGFR3-201ENST00000260795 SCRIBQ14160 1630 aa21.72■■□□□ 1.07
FGFR3-201ENST00000260795 CENPBP07199 599 aaPredicted RBP21.71■■□□□ 1.07
FGFR3-201ENST00000260795 ITGAEP38570 1179 aa21.61■■□□□ 1.05
FGFR3-201ENST00000260795 HNRNPUL2Q1KMD3 747 aaKnown RBP21.57■■□□□ 1.04
FGFR3-201ENST00000260795 RB1CC1Q8TDY2 1594 aa21.54■■□□□ 1.04
FGFR3-201ENST00000260795 DIEXFQ68CQ4 756 aaKnown RBP21.38■■□□□ 1.01
FGFR3-201ENST00000260795 PELP1Q8IZL8 1130 aaKnown RBP21.36■■□□□ 1.01
FGFR3-201ENST00000260795 UNC13AQ9UPW8 1703 aa21.28■■□□□ 1
FGFR3-201ENST00000260795 P3H3Q8IVL6 736 aa21.18■□□□□ 0.98
FGFR3-201ENST00000260795 CSRNP3Q8WYN3 585 aa21.16■□□□□ 0.98
FGFR3-201ENST00000260795 RSF1Q96T23 1441 aaPredicted RBP21.16■□□□□ 0.98
FGFR3-201ENST00000260795 GTF3C3Q9Y5Q9 886 aa21.13■□□□□ 0.97
FGFR3-201ENST00000260795 ARID3CA6NKF2 412 aa21.08■□□□□ 0.97
FGFR3-201ENST00000260795 CECR2Q9BXF3 1484 aa21.08■□□□□ 0.96
FGFR3-201ENST00000260795 FBLN2P98095 1184 aa21.07■□□□□ 0.96
FGFR3-201ENST00000260795 BICRAQ9NZM4 1560 aa21■□□□□ 0.95
FGFR3-201ENST00000260795 FAM50AQ14320 339 aaKnown RBP20.98■□□□□ 0.95
FGFR3-201ENST00000260795 ACIN1Q9UKV3 1341 aaKnown RBP20.97■□□□□ 0.95
FGFR3-201ENST00000260795 SCAF1Q9H7N4 1312 aaKnown RBP20.93■□□□□ 0.94
FGFR3-201ENST00000260795 ZNF316A6NFI3 1004 aaPredicted RBP20.93■□□□□ 0.94
FGFR3-201ENST00000260795 CNGB1Q14028 1251 aaPredicted RBP20.92■□□□□ 0.94
FGFR3-201ENST00000260795 NEUROD1Q13562 356 aa20.89■□□□□ 0.93
FGFR3-201ENST00000260795 MYT1LQ9UL68 1186 aa20.88■□□□□ 0.93
FGFR3-201ENST00000260795 POLR3GLQ9BT43 218 aa20.8■□□□□ 0.92
FGFR3-201ENST00000260795 MROH2BQ7Z745 1585 aa20.8■□□□□ 0.92
FGFR3-201ENST00000260795 BAZ1AQ9NRL2 1556 aaPredicted RBP20.78■□□□□ 0.92
FGFR3-201ENST00000260795 NEFLP07196 543 aa20.78■□□□□ 0.92
FGFR3-201ENST00000260795 SMARCA4P51532 1647 aa20.72■□□□□ 0.91
FGFR3-201ENST00000260795 WIZO95785 1651 aa20.66■□□□□ 0.9
FGFR3-201ENST00000260795 TRIM52Q96A61 297 aa20.65■□□□□ 0.9
FGFR3-201ENST00000260795 BCANQ96GW7 911 aa20.64■□□□□ 0.89
FGFR3-201ENST00000260795 MIER1Q8N108 512 aa20.59■□□□□ 0.89
FGFR3-201ENST00000260795 CEP162Q5TB80 1403 aa20.58■□□□□ 0.88
FGFR3-201ENST00000260795 ERICH6Q7L0X2 663 aa20.58■□□□□ 0.88
FGFR3-201ENST00000260795 PEG3Q9GZU2 1588 aa20.57■□□□□ 0.88
FGFR3-201ENST00000260795 BAZ1BQ9UIG0 1483 aaKnown RBP20.55■□□□□ 0.88
FGFR3-201ENST00000260795 ZNF777Q9ULD5 760 aaPredicted RBP20.51■□□□□ 0.87
FGFR3-201ENST00000260795 WRNQ14191 1432 aaPredicted RBP eCLIP20.49■□□□□ 0.873e-7■■■□□ 16.4
FGFR3-201ENST00000260795 TOP2AP11388 1531 aaKnown RBP20.48■□□□□ 0.87
FGFR3-201ENST00000260795 MYT1Q01538 1121 aa20.47■□□□□ 0.87
FGFR3-201ENST00000260795 SOGA1O94964 1423 aa20.46■□□□□ 0.87
FGFR3-201ENST00000260795 ZNF326Q5BKZ1 582 aaKnown RBP20.46■□□□□ 0.87
FGFR3-201ENST00000260795 CLIP1P30622 1438 aa20.43■□□□□ 0.86
FGFR3-201ENST00000260795 CCDC88BA6NC98 1476 aa20.39■□□□□ 0.85
FGFR3-201ENST00000260795 CHIC2Q9UKJ5 165 aa20.38■□□□□ 0.85
FGFR3-201ENST00000260795 ABCC8Q09428 1581 aa20.37■□□□□ 0.85
FGFR3-201ENST00000260795 TNIKQ9UKE5 1360 aa20.36■□□□□ 0.85
FGFR3-201ENST00000260795 EIF4G1Q04637 1599 aaKnown RBP20.36■□□□□ 0.85
FGFR3-201ENST00000260795 DDX10Q13206 875 aaKnown RBP20.33■□□□□ 0.84
FGFR3-201ENST00000260795 HIRIP3Q9BW71 556 aaPredicted RBP20.33■□□□□ 0.84
FGFR3-201ENST00000260795 SMARCA2P51531 1590 aa20.3■□□□□ 0.84
FGFR3-201ENST00000260795 GOLGA3Q08378 1498 aa20.29■□□□□ 0.84
FGFR3-201ENST00000260795 ANP32CO43423 234 aa20.28■□□□□ 0.84
FGFR3-201ENST00000260795 ATAD2BQ9ULI0 1458 aa20.27■□□□□ 0.84
FGFR3-201ENST00000260795 CHMP7Q8WUX9 453 aaPredicted RBP20.26■□□□□ 0.83
FGFR3-201ENST00000260795 EEA1Q15075 1411 aa20.22■□□□□ 0.83
FGFR3-201ENST00000260795 SLC4A1APQ9BWU0 796 aaKnown RBP20.2■□□□□ 0.82
FGFR3-201ENST00000260795 FKBP8Q14318 412 aa20.18■□□□□ 0.82
FGFR3-201ENST00000260795 HMGXB3Q12766 1538 aa20.16■□□□□ 0.82
FGFR3-201ENST00000260795 KIF27Q86VH2 1401 aa20.12■□□□□ 0.81
FGFR3-201ENST00000260795 CDK11AQ9UQ88 783 aaPredicted RBP20.11■□□□□ 0.81
FGFR3-201ENST00000260795 RUSC2Q8N2Y8 1516 aa20.11■□□□□ 0.81
FGFR3-201ENST00000260795 RRP7BPQ9NSQ0 103 aa20.1■□□□□ 0.81
FGFR3-201ENST00000260795 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
FGFR3-201ENST00000260795 CEP164Q9UPV0 1460 aa20.1■□□□□ 0.81
FGFR3-201ENST00000260795 MTUS2Q5JR59 1369 aa20.09■□□□□ 0.81
FGFR3-201ENST00000260795 KANK4Q5T7N3 995 aaPredicted RBP20.06■□□□□ 0.8
FGFR3-201ENST00000260795 CUX2O14529 1486 aa20.05■□□□□ 0.8
FGFR3-201ENST00000260795 KCNH8Q96L42 1107 aa20.05■□□□□ 0.8
FGFR3-201ENST00000260795 TDRD9Q8NDG6 1382 aaKnown RBP20.04■□□□□ 0.8
FGFR3-201ENST00000260795 SIN3AQ96ST3 1273 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms