RNA–Protein interactions for RNA: ENST00000566624.5

RPL4-213, Transcript of ribosomal protein L4, humanhuman

TSL 2

Gene RPL4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-213ENST00000566624 NISCHQ9Y2I1 1504 aa27.82■■■□□ 2.04
RPL4-213ENST00000566624 ABCC9O60706 1549 aa25.82■■□□□ 1.72
RPL4-213ENST00000566624 CCDC180Q9P1Z9 1646 aa25.18■■□□□ 1.62
RPL4-213ENST00000566624 DNAJC5BQ9UF47 199 aa24.82■■□□□ 1.56
RPL4-213ENST00000566624 RB1CC1Q8TDY2 1594 aa24.25■■□□□ 1.47
RPL4-213ENST00000566624 PABPN1Q86U42 306 aaKnown RBP eCLIP23.95■■□□□ 1.42
RPL4-213ENST00000566624 NACADO15069 1562 aa23.95■■□□□ 1.42
RPL4-213ENST00000566624 UNC13AQ9UPW8 1703 aa23.76■■□□□ 1.39
RPL4-213ENST00000566624 DCAF8L2P0C7V8 631 aa23.69■■□□□ 1.38
RPL4-213ENST00000566624 BICRAQ9NZM4 1560 aa23.67■■□□□ 1.38
RPL4-213ENST00000566624 MYO15BQ96JP2 1530 aa23.42■■□□□ 1.34
RPL4-213ENST00000566624 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
RPL4-213ENST00000566624 CC2D2AQ9P2K1 1620 aa23.28■■□□□ 1.32
RPL4-213ENST00000566624 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
RPL4-213ENST00000566624 DNAJC5Q9H3Z4 198 aa23.15■■□□□ 1.3
RPL4-213ENST00000566624 EIF4G1Q04637 1599 aaKnown RBP23.08■■□□□ 1.29
RPL4-213ENST00000566624 SCRIBQ14160 1630 aa22.95■■□□□ 1.26
RPL4-213ENST00000566624 ZCCHC6Q5VYS8 1495 aaKnown RBP22.93■■□□□ 1.26
RPL4-213ENST00000566624 DCAF1Q9Y4B6 1507 aa22.92■■□□□ 1.26
RPL4-213ENST00000566624 AEBP2Q6ZN18 517 aaPredicted RBP22.48■■□□□ 1.19
RPL4-213ENST00000566624 CUX2O14529 1486 aa22.44■■□□□ 1.18
RPL4-213ENST00000566624 ERCC6Q03468 1493 aa22.27■■□□□ 1.16
RPL4-213ENST00000566624 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
RPL4-213ENST00000566624 NESP48681 1621 aa22.05■■□□□ 1.12
RPL4-213ENST00000566624 ATAD2BQ9ULI0 1458 aa22■■□□□ 1.11
RPL4-213ENST00000566624 THOC2Q8NI27 1593 aaKnown RBP21.91■■□□□ 1.1
RPL4-213ENST00000566624 HMGXB3Q12766 1538 aa21.9■■□□□ 1.1
RPL4-213ENST00000566624 TRIM41Q8WV44 630 aa21.86■■□□□ 1.09
RPL4-213ENST00000566624 SMARCA2P51531 1590 aa21.86■■□□□ 1.09
RPL4-213ENST00000566624 SMARCA4P51532 1647 aa21.82■■□□□ 1.08
RPL4-213ENST00000566624 BAZ1BQ9UIG0 1483 aaKnown RBP21.72■■□□□ 1.07
RPL4-213ENST00000566624 LAMC3Q9Y6N6 1575 aa21.7■■□□□ 1.06
RPL4-213ENST00000566624 KIF21AQ7Z4S6 1674 aa21.69■■□□□ 1.06
RPL4-213ENST00000566624 PEG3Q9GZU2 1588 aa21.61■■□□□ 1.05
RPL4-213ENST00000566624 BAZ1AQ9NRL2 1556 aaPredicted RBP21.59■■□□□ 1.05
RPL4-213ENST00000566624 PDS5BQ9NTI5 1447 aa21.58■■□□□ 1.05
RPL4-213ENST00000566624 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
RPL4-213ENST00000566624 MRC2Q9UBG0 1479 aa21.47■■□□□ 1.03
RPL4-213ENST00000566624 MROH2BQ7Z745 1585 aa21.47■■□□□ 1.03
RPL4-213ENST00000566624 WDR62O43379 1518 aa21.45■■□□□ 1.02
RPL4-213ENST00000566624 CADPSQ9ULU8 1353 aa21.43■■□□□ 1.02
RPL4-213ENST00000566624 OSCARQ8IYS5 282 aa21.31■■□□□ 1
RPL4-213ENST00000566624 CEP164Q9UPV0 1460 aa21.26■□□□□ 0.99
RPL4-213ENST00000566624 FANCD2Q9BXW9 1451 aa21.2■□□□□ 0.98
RPL4-213ENST00000566624 WIZO95785 1651 aa21.16■□□□□ 0.98
RPL4-213ENST00000566624 RIMBP3CA6NJZ7 1639 aa21.15■□□□□ 0.98
RPL4-213ENST00000566624 RIMBP3BA6NNM3 1639 aa21.15■□□□□ 0.98
RPL4-213ENST00000566624 RIMBP3Q9UFD9 1639 aa21.15■□□□□ 0.98
RPL4-213ENST00000566624 URB2Q14146 1524 aaKnown RBP21.1■□□□□ 0.97
RPL4-213ENST00000566624 CFTRP13569 1480 aa21.08■□□□□ 0.97
RPL4-213ENST00000566624 ARHGEF11O15085 1522 aa21.02■□□□□ 0.96
RPL4-213ENST00000566624 ZNF608Q9ULD9 1512 aaPredicted RBP20.95■□□□□ 0.94
RPL4-213ENST00000566624 CYB5RLQ6IPT4 315 aa20.88■□□□□ 0.93
RPL4-213ENST00000566624 IFT140Q96RY7 1462 aa20.85■□□□□ 0.93
RPL4-213ENST00000566624 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.92
RPL4-213ENST00000566624 TRHP20396 242 aaPredicted RBP20.8■□□□□ 0.92
RPL4-213ENST00000566624 ARAP1Q96P48 1450 aa20.8■□□□□ 0.92
RPL4-213ENST00000566624 RSF1Q96T23 1441 aaPredicted RBP20.79■□□□□ 0.92
RPL4-213ENST00000566624 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
RPL4-213ENST00000566624 PRDM2Q13029 1718 aa20.76■□□□□ 0.91
RPL4-213ENST00000566624 TOPBP1Q92547 1522 aa20.74■□□□□ 0.91
RPL4-213ENST00000566624 CHD1O14646 1710 aa20.72■□□□□ 0.91
RPL4-213ENST00000566624 AQRO60306 1485 aaKnown RBP eCLIP20.66■□□□□ 0.92e-11■■■■■ 43.3
RPL4-213ENST00000566624 TARBP1Q13395 1621 aaKnown RBP20.63■□□□□ 0.89
RPL4-213ENST00000566624 CCDC88BA6NC98 1476 aa20.62■□□□□ 0.89
RPL4-213ENST00000566624 DNMBPQ6XZF7 1577 aa20.59■□□□□ 0.89
RPL4-213ENST00000566624 FBLN2P98095 1184 aa20.58■□□□□ 0.89
RPL4-213ENST00000566624 ABCC8Q09428 1581 aa20.58■□□□□ 0.88
RPL4-213ENST00000566624 POLA1P09884 1462 aaPredicted RBP20.5■□□□□ 0.87
RPL4-213ENST00000566624 CLASP1Q7Z460 1538 aa20.48■□□□□ 0.87
RPL4-213ENST00000566624 RAD54L2Q9Y4B4 1467 aa20.45■□□□□ 0.86
RPL4-213ENST00000566624 TDRD9Q8NDG6 1382 aaKnown RBP20.44■□□□□ 0.86
RPL4-213ENST00000566624 SNAPC4Q5SXM2 1469 aa20.42■□□□□ 0.86
RPL4-213ENST00000566624 SOGA1O94964 1423 aa20.36■□□□□ 0.85
RPL4-213ENST00000566624 SYNJ1O43426 1573 aa20.35■□□□□ 0.85
RPL4-213ENST00000566624 CHMP7Q8WUX9 453 aaPredicted RBP20.32■□□□□ 0.84
RPL4-213ENST00000566624 MAGI1Q96QZ7 1491 aaPredicted RBP20.3■□□□□ 0.84
RPL4-213ENST00000566624 WDR97A6NE52 1622 aa20.28■□□□□ 0.84
RPL4-213ENST00000566624 GAPVD1Q14C86 1478 aa20.28■□□□□ 0.84
RPL4-213ENST00000566624 FGD5Q6ZNL6 1462 aa20.28■□□□□ 0.84
RPL4-213ENST00000566624 SYNJ2O15056 1496 aa20.25■□□□□ 0.83
RPL4-213ENST00000566624 GRIN2BQ13224 1484 aa20.25■□□□□ 0.83
RPL4-213ENST00000566624 CUX1P39880 1505 aa20.2■□□□□ 0.82
RPL4-213ENST00000566624 ERCC6L2Q5T890 1561 aa20.17■□□□□ 0.82
RPL4-213ENST00000566624 PBRM1Q86U86 1689 aa20.13■□□□□ 0.81
RPL4-213ENST00000566624 ABCA5Q8WWZ7 1642 aa20.05■□□□□ 0.8
RPL4-213ENST00000566624 CEP170Q5SW79 1584 aa20.03■□□□□ 0.8
RPL4-213ENST00000566624 KIF13AQ9H1H9 1805 aa20.02■□□□□ 0.8
RPL4-213ENST00000566624 GRIN2AQ12879 1464 aa20.01■□□□□ 0.79
RPL4-213ENST00000566624 ABCA10Q8WWZ4 1543 aa20■□□□□ 0.79
RPL4-213ENST00000566624 NUP160Q12769 1436 aa19.98■□□□□ 0.79
RPL4-213ENST00000566624 SHROOM2Q13796 1616 aa19.95■□□□□ 0.78
RPL4-213ENST00000566624 ADAMTS12P58397 1594 aa19.93■□□□□ 0.78
RPL4-213ENST00000566624 KDM4FA0A1W2PPD8 638 aa19.87■□□□□ 0.77
RPL4-213ENST00000566624 ILDR1Q86SU0 546 aaPredicted RBP19.86■□□□□ 0.77
RPL4-213ENST00000566624 ABCC10Q5T3U5 1492 aa19.82■□□□□ 0.76
RPL4-213ENST00000566624 FHAD1B1AJZ9 1412 aa19.82■□□□□ 0.76
RPL4-213ENST00000566624 FAM69CQ0P6D2 419 aa19.81■□□□□ 0.76
RPL4-213ENST00000566624 PRG4Q92954 1404 aaPredicted RBP19.81■□□□□ 0.76
RPL4-213ENST00000566624 WRNQ14191 1432 aaPredicted RBP eCLIP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms