RNA–Protein interactions for RNA: ENST00000352904.5

FGFR3-203, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 1 (best) BASIC

Gene FGFR3, Length 3,733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-203ENST00000352904 NISCHQ9Y2I1 1504 aa30.39■■■□□ 2.46
FGFR3-203ENST00000352904 CCDC180Q9P1Z9 1646 aa26.36■■□□□ 1.81
FGFR3-203ENST00000352904 SHROOM4Q9ULL8 1493 aa26.08■■□□□ 1.77
FGFR3-203ENST00000352904 ZCCHC6Q5VYS8 1495 aaKnown RBP25.69■■□□□ 1.7
FGFR3-203ENST00000352904 SUPT5HO00267 1087 aaKnown RBP25.68■■□□□ 1.7
FGFR3-203ENST00000352904 DCAF8L2P0C7V8 631 aa25.45■■□□□ 1.66
FGFR3-203ENST00000352904 ABCC9O60706 1549 aa25.19■■□□□ 1.62
FGFR3-203ENST00000352904 CHIC1Q5VXU3 224 aa24.91■■□□□ 1.58
FGFR3-203ENST00000352904 DCAF1Q9Y4B6 1507 aa24.91■■□□□ 1.58
FGFR3-203ENST00000352904 MYO15BQ96JP2 1530 aa24.69■■□□□ 1.54
FGFR3-203ENST00000352904 NACADO15069 1562 aa24.63■■□□□ 1.53
FGFR3-203ENST00000352904 RB1CC1Q8TDY2 1594 aa24.55■■□□□ 1.52
FGFR3-203ENST00000352904 PCGF6Q9BYE7 350 aa24.3■■□□□ 1.48
FGFR3-203ENST00000352904 HRCP23327 699 aa24.3■■□□□ 1.48
FGFR3-203ENST00000352904 SCRIBQ14160 1630 aa24.21■■□□□ 1.47
FGFR3-203ENST00000352904 LOC105371045A0A1W2PR82 267 aa24.19■■□□□ 1.46
FGFR3-203ENST00000352904 RSF1Q96T23 1441 aaPredicted RBP24.1■■□□□ 1.45
FGFR3-203ENST00000352904 UNC13AQ9UPW8 1703 aa24.02■■□□□ 1.44
FGFR3-203ENST00000352904 TRIM41Q8WV44 630 aa23.94■■□□□ 1.42
FGFR3-203ENST00000352904 TRIM26Q12899 539 aaPredicted RBP23.82■■□□□ 1.4
FGFR3-203ENST00000352904 BICRAQ9NZM4 1560 aa23.79■■□□□ 1.4
FGFR3-203ENST00000352904 FAM9AQ8IZU1 332 aaPredicted RBP23.74■■□□□ 1.39
FGFR3-203ENST00000352904 PPARGC1BQ86YN6 1023 aaKnown RBP23.74■■□□□ 1.39
FGFR3-203ENST00000352904 CECR2Q9BXF3 1484 aa23.69■■□□□ 1.38
FGFR3-203ENST00000352904 MROH2BQ7Z745 1585 aa23.61■■□□□ 1.37
FGFR3-203ENST00000352904 EHMT2Q96KQ7 1210 aa23.55■■□□□ 1.36
FGFR3-203ENST00000352904 PABPN1Q86U42 306 aaKnown RBP eCLIP23.47■■□□□ 1.356e-7■■■□□ 14.8
FGFR3-203ENST00000352904 WIZO95785 1651 aa23.47■■□□□ 1.35
FGFR3-203ENST00000352904 ZEB1P37275 1124 aaPredicted RBP23.41■■□□□ 1.34
FGFR3-203ENST00000352904 BAZ1AQ9NRL2 1556 aaPredicted RBP23.37■■□□□ 1.33
FGFR3-203ENST00000352904 TOP2AP11388 1531 aaKnown RBP23.14■■□□□ 1.29
FGFR3-203ENST00000352904 SMARCA4P51532 1647 aa23.11■■□□□ 1.29
FGFR3-203ENST00000352904 EIF4G1Q04637 1599 aaKnown RBP23.1■■□□□ 1.29
FGFR3-203ENST00000352904 CCDC88BA6NC98 1476 aa23.07■■□□□ 1.28
FGFR3-203ENST00000352904 ABCC8Q09428 1581 aa23.01■■□□□ 1.27
FGFR3-203ENST00000352904 SMARCA2P51531 1590 aa22.98■■□□□ 1.27
FGFR3-203ENST00000352904 CC2D2AQ9P2K1 1620 aa22.91■■□□□ 1.26
FGFR3-203ENST00000352904 CCER1Q8TC90 406 aaPredicted RBP22.87■■□□□ 1.25
FGFR3-203ENST00000352904 SOGA1O94964 1423 aa22.84■■□□□ 1.25
FGFR3-203ENST00000352904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.84■■□□□ 1.25
FGFR3-203ENST00000352904 UBTFP17480 764 aaKnown RBP22.84■■□□□ 1.25
FGFR3-203ENST00000352904 CSRNP3Q8WYN3 585 aa22.83■■□□□ 1.25
FGFR3-203ENST00000352904 TTBK1Q5TCY1 1321 aaPredicted RBP22.82■■□□□ 1.24
FGFR3-203ENST00000352904 EEA1Q15075 1411 aa22.82■■□□□ 1.24
FGFR3-203ENST00000352904 CEP162Q5TB80 1403 aa22.82■■□□□ 1.24
FGFR3-203ENST00000352904 PEG3Q9GZU2 1588 aa22.81■■□□□ 1.24
FGFR3-203ENST00000352904 TNIKQ9UKE5 1360 aa22.78■■□□□ 1.24
FGFR3-203ENST00000352904 WRNQ14191 1432 aaPredicted RBP eCLIP22.77■■□□□ 1.243e-7■■■□□ 16.4
FGFR3-203ENST00000352904 DNAJC5BQ9UF47 199 aa22.76■■□□□ 1.23
FGFR3-203ENST00000352904 ATAD2BQ9ULI0 1458 aa22.69■■□□□ 1.22
FGFR3-203ENST00000352904 RUSC2Q8N2Y8 1516 aa22.68■■□□□ 1.22
FGFR3-203ENST00000352904 NCAPD3P42695 1498 aa22.67■■□□□ 1.22
FGFR3-203ENST00000352904 HMGXB3Q12766 1538 aa22.66■■□□□ 1.22
FGFR3-203ENST00000352904 GOLGA3Q08378 1498 aa22.65■■□□□ 1.22
FGFR3-203ENST00000352904 BAZ1BQ9UIG0 1483 aaKnown RBP22.54■■□□□ 1.2
FGFR3-203ENST00000352904 CEP164Q9UPV0 1460 aa22.51■■□□□ 1.19
FGFR3-203ENST00000352904 SYNJ1O43426 1573 aa22.47■■□□□ 1.19
FGFR3-203ENST00000352904 APLP2Q06481 763 aa22.43■■□□□ 1.18
FGFR3-203ENST00000352904 CLIP1P30622 1438 aa22.41■■□□□ 1.18
FGFR3-203ENST00000352904 DIEXFQ68CQ4 756 aaKnown RBP22.41■■□□□ 1.18
FGFR3-203ENST00000352904 KIF21BO75037 1637 aa22.39■■□□□ 1.17
FGFR3-203ENST00000352904 SCAF1Q9H7N4 1312 aaKnown RBP22.38■■□□□ 1.17
FGFR3-203ENST00000352904 RANGAP1P46060 587 aaPredicted RBP22.36■■□□□ 1.17
FGFR3-203ENST00000352904 HNRNPUL2Q1KMD3 747 aaKnown RBP22.33■■□□□ 1.17
FGFR3-203ENST00000352904 VPS8Q8N3P4 1428 aa22.29■■□□□ 1.16
FGFR3-203ENST00000352904 RAPGEF2Q9Y4G8 1499 aa22.28■■□□□ 1.16
FGFR3-203ENST00000352904 CENPBP07199 599 aaPredicted RBP22.23■■□□□ 1.15
FGFR3-203ENST00000352904 ACIN1Q9UKV3 1341 aaKnown RBP22.23■■□□□ 1.15
FGFR3-203ENST00000352904 ZNF316A6NFI3 1004 aaPredicted RBP22.22■■□□□ 1.15
FGFR3-203ENST00000352904 TOP2BQ02880 1626 aa22.21■■□□□ 1.15
FGFR3-203ENST00000352904 PELP1Q8IZL8 1130 aaKnown RBP22.16■■□□□ 1.14
FGFR3-203ENST00000352904 NEUROD1Q13562 356 aa22.15■■□□□ 1.14
FGFR3-203ENST00000352904 BIVM-ERCC5R4GMW8 1640 aa22.08■■□□□ 1.13
FGFR3-203ENST00000352904 LAMC3Q9Y6N6 1575 aa22.06■■□□□ 1.12
FGFR3-203ENST00000352904 ERICH3Q5RHP9 1530 aa22.05■■□□□ 1.12
FGFR3-203ENST00000352904 PRXQ9BXM0 1461 aa22.04■■□□□ 1.12
FGFR3-203ENST00000352904 KIF27Q86VH2 1401 aa22.03■■□□□ 1.12
FGFR3-203ENST00000352904 GTF3C3Q9Y5Q9 886 aa21.99■■□□□ 1.11
FGFR3-203ENST00000352904 CUX1P39880 1505 aa21.98■■□□□ 1.11
FGFR3-203ENST00000352904 PRDM2Q13029 1718 aa21.96■■□□□ 1.11
FGFR3-203ENST00000352904 CADPSQ9ULU8 1353 aa21.95■■□□□ 1.1
FGFR3-203ENST00000352904 CFTRP13569 1480 aa21.95■■□□□ 1.1
FGFR3-203ENST00000352904 ARAP1Q96P48 1450 aa21.93■■□□□ 1.1
FGFR3-203ENST00000352904 YTHDC1Q96MU7 727 aaKnown RBP21.92■■□□□ 1.1
FGFR3-203ENST00000352904 KANK4Q5T7N3 995 aaPredicted RBP21.9■■□□□ 1.1
FGFR3-203ENST00000352904 NESP48681 1621 aa21.9■■□□□ 1.1
FGFR3-203ENST00000352904 CLSPNQ9HAW4 1339 aa21.86■■□□□ 1.09
FGFR3-203ENST00000352904 MIER1Q8N108 512 aa21.86■■□□□ 1.09
FGFR3-203ENST00000352904 PDS5BQ9NTI5 1447 aa21.81■■□□□ 1.08
FGFR3-203ENST00000352904 DHX57Q6P158 1386 aaKnown RBP21.79■■□□□ 1.08
FGFR3-203ENST00000352904 CUX2O14529 1486 aa21.78■■□□□ 1.08
FGFR3-203ENST00000352904 KIF21AQ7Z4S6 1674 aa21.77■■□□□ 1.08
FGFR3-203ENST00000352904 ARHGAP35Q9NRY4 1499 aa21.76■■□□□ 1.07
FGFR3-203ENST00000352904 ITGAEP38570 1179 aa21.75■■□□□ 1.07
FGFR3-203ENST00000352904 RRBP1Q9P2E9 1410 aaKnown RBP21.74■■□□□ 1.07
FGFR3-203ENST00000352904 CCNB3Q8WWL7 1395 aa21.73■■□□□ 1.07
FGFR3-203ENST00000352904 IGF1RP08069 1367 aa21.72■■□□□ 1.07
FGFR3-203ENST00000352904 FANCD2Q9BXW9 1451 aa21.71■■□□□ 1.07
FGFR3-203ENST00000352904 ERCC6Q03468 1493 aa21.7■■□□□ 1.06
FGFR3-203ENST00000352904 CARMIL1Q5VZK9 1371 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms