RNA–Protein interactions for RNA: ENST00000340107.8

FGFR3-202, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene FGFR3, Length 4,293 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-202ENST00000340107 NISCHQ9Y2I1 1504 aa33.41■■■□□ 2.94
FGFR3-202ENST00000340107 DCAF8L2P0C7V8 631 aa32.99■■■□□ 2.87
FGFR3-202ENST00000340107 SUPT5HO00267 1087 aaKnown RBP31.63■■■□□ 2.65
FGFR3-202ENST00000340107 SHROOM4Q9ULL8 1493 aa31.5■■■□□ 2.63
FGFR3-202ENST00000340107 EHMT2Q96KQ7 1210 aa30.27■■■□□ 2.44
FGFR3-202ENST00000340107 FAM9AQ8IZU1 332 aaPredicted RBP29.72■■■□□ 2.35
FGFR3-202ENST00000340107 PCGF6Q9BYE7 350 aa29.3■■■□□ 2.28
FGFR3-202ENST00000340107 TRIM41Q8WV44 630 aa29.19■■■□□ 2.26
FGFR3-202ENST00000340107 TTBK1Q5TCY1 1321 aaPredicted RBP29.15■■■□□ 2.26
FGFR3-202ENST00000340107 APLP2Q06481 763 aa28.9■■■□□ 2.22
FGFR3-202ENST00000340107 RANGAP1P46060 587 aaPredicted RBP28.88■■■□□ 2.21
FGFR3-202ENST00000340107 CHIC1Q5VXU3 224 aa28.7■■■□□ 2.18
FGFR3-202ENST00000340107 LOC105371045A0A1W2PR82 267 aa28.59■■■□□ 2.17
FGFR3-202ENST00000340107 UBTFP17480 764 aaKnown RBP28.59■■■□□ 2.17
FGFR3-202ENST00000340107 PPARGC1BQ86YN6 1023 aaKnown RBP28.55■■■□□ 2.16
FGFR3-202ENST00000340107 ABCC9O60706 1549 aa28.42■■■□□ 2.14
FGFR3-202ENST00000340107 CCER1Q8TC90 406 aaPredicted RBP28.33■■■□□ 2.13
FGFR3-202ENST00000340107 ATP1B4Q9UN42 357 aaPredicted RBP28.26■■■□□ 2.12
FGFR3-202ENST00000340107 PABPN1Q86U42 306 aaKnown RBP eCLIP28.13■■■□□ 2.096e-7■■■□□ 14.8
FGFR3-202ENST00000340107 ZEB1P37275 1124 aaPredicted RBP28.08■■■□□ 2.09
FGFR3-202ENST00000340107 TRIM26Q12899 539 aaPredicted RBP28.07■■■□□ 2.08
FGFR3-202ENST00000340107 HRCP23327 699 aa27.89■■■□□ 2.05
FGFR3-202ENST00000340107 ZCCHC6Q5VYS8 1495 aaKnown RBP27.75■■■□□ 2.03
FGFR3-202ENST00000340107 ITGAEP38570 1179 aa27.64■■■□□ 2.02
FGFR3-202ENST00000340107 HNRNPUL2Q1KMD3 747 aaKnown RBP27.61■■■□□ 2.01
FGFR3-202ENST00000340107 CENPBP07199 599 aaPredicted RBP27.54■■■□□ 2
FGFR3-202ENST00000340107 YTHDC1Q96MU7 727 aaKnown RBP27.49■■□□□ 1.99
FGFR3-202ENST00000340107 PELP1Q8IZL8 1130 aaKnown RBP27.48■■□□□ 1.99
FGFR3-202ENST00000340107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.47■■□□□ 1.99
FGFR3-202ENST00000340107 SCRIBQ14160 1630 aa27.39■■□□□ 1.98
FGFR3-202ENST00000340107 CCDC180Q9P1Z9 1646 aa27.29■■□□□ 1.96
FGFR3-202ENST00000340107 CSRNP3Q8WYN3 585 aa27.08■■□□□ 1.93
FGFR3-202ENST00000340107 FAM50AQ14320 339 aaKnown RBP26.93■■□□□ 1.9
FGFR3-202ENST00000340107 DIEXFQ68CQ4 756 aaKnown RBP26.85■■□□□ 1.89
FGFR3-202ENST00000340107 P3H3Q8IVL6 736 aa26.82■■□□□ 1.88
FGFR3-202ENST00000340107 RSF1Q96T23 1441 aaPredicted RBP26.81■■□□□ 1.88
FGFR3-202ENST00000340107 POLR3GLQ9BT43 218 aa26.81■■□□□ 1.88
FGFR3-202ENST00000340107 MYO15BQ96JP2 1530 aa26.79■■□□□ 1.88
FGFR3-202ENST00000340107 CNGB1Q14028 1251 aaPredicted RBP26.78■■□□□ 1.88
FGFR3-202ENST00000340107 MYT1LQ9UL68 1186 aa26.75■■□□□ 1.87
FGFR3-202ENST00000340107 NEFLP07196 543 aa26.75■■□□□ 1.87
FGFR3-202ENST00000340107 NEUROD1Q13562 356 aa26.68■■□□□ 1.86
FGFR3-202ENST00000340107 FBLN2P98095 1184 aa26.64■■□□□ 1.86
FGFR3-202ENST00000340107 ARID3CA6NKF2 412 aa26.61■■□□□ 1.85
FGFR3-202ENST00000340107 TRIM52Q96A61 297 aa26.56■■□□□ 1.84
FGFR3-202ENST00000340107 DCAF1Q9Y4B6 1507 aa26.55■■□□□ 1.84
FGFR3-202ENST00000340107 RB1CC1Q8TDY2 1594 aa26.5■■□□□ 1.83
FGFR3-202ENST00000340107 CECR2Q9BXF3 1484 aa26.46■■□□□ 1.83
FGFR3-202ENST00000340107 ERICH6Q7L0X2 663 aa26.42■■□□□ 1.82
FGFR3-202ENST00000340107 NACADO15069 1562 aa26.41■■□□□ 1.82
FGFR3-202ENST00000340107 ZNF316A6NFI3 1004 aaPredicted RBP26.36■■□□□ 1.81
FGFR3-202ENST00000340107 ZNF326Q5BKZ1 582 aaKnown RBP26.25■■□□□ 1.79
FGFR3-202ENST00000340107 GTF3C3Q9Y5Q9 886 aa26.18■■□□□ 1.78
FGFR3-202ENST00000340107 ZNF777Q9ULD5 760 aaPredicted RBP26.14■■□□□ 1.77
FGFR3-202ENST00000340107 CLIP1P30622 1438 aa26.12■■□□□ 1.77
FGFR3-202ENST00000340107 WRNQ14191 1432 aaPredicted RBP eCLIP26.12■■□□□ 1.773e-7■■■□□ 16.4
FGFR3-202ENST00000340107 CEP162Q5TB80 1403 aa26.07■■□□□ 1.76
FGFR3-202ENST00000340107 BAZ1BQ9UIG0 1483 aaKnown RBP26.06■■□□□ 1.76
FGFR3-202ENST00000340107 BAZ1AQ9NRL2 1556 aaPredicted RBP26.05■■□□□ 1.76
FGFR3-202ENST00000340107 MROH2BQ7Z745 1585 aa26.05■■□□□ 1.76
FGFR3-202ENST00000340107 SLC4A1APQ9BWU0 796 aaKnown RBP26.04■■□□□ 1.76
FGFR3-202ENST00000340107 ANP32CO43423 234 aa26■■□□□ 1.75
FGFR3-202ENST00000340107 BCANQ96GW7 911 aa25.99■■□□□ 1.75
FGFR3-202ENST00000340107 CHIC2Q9UKJ5 165 aa25.96■■□□□ 1.75
FGFR3-202ENST00000340107 EEA1Q15075 1411 aa25.93■■□□□ 1.74
FGFR3-202ENST00000340107 CDK11AQ9UQ88 783 aaPredicted RBP25.93■■□□□ 1.74
FGFR3-202ENST00000340107 GOLGA3Q08378 1498 aa25.92■■□□□ 1.74
FGFR3-202ENST00000340107 ACIN1Q9UKV3 1341 aaKnown RBP25.91■■□□□ 1.74
FGFR3-202ENST00000340107 SOGA1O94964 1423 aa25.9■■□□□ 1.74
FGFR3-202ENST00000340107 TNIKQ9UKE5 1360 aa25.86■■□□□ 1.73
FGFR3-202ENST00000340107 DDX10Q13206 875 aaKnown RBP25.8■■□□□ 1.72
FGFR3-202ENST00000340107 MTUS2Q5JR59 1369 aa25.79■■□□□ 1.72
FGFR3-202ENST00000340107 CCDC88BA6NC98 1476 aa25.78■■□□□ 1.72
FGFR3-202ENST00000340107 TONSLQ96HA7 1378 aa25.77■■□□□ 1.72
FGFR3-202ENST00000340107 HIRIP3Q9BW71 556 aaPredicted RBP25.74■■□□□ 1.71
FGFR3-202ENST00000340107 KIF27Q86VH2 1401 aa25.74■■□□□ 1.71
FGFR3-202ENST00000340107 ABCC8Q09428 1581 aa25.73■■□□□ 1.71
FGFR3-202ENST00000340107 CEP164Q9UPV0 1460 aa25.72■■□□□ 1.71
FGFR3-202ENST00000340107 CHMP7Q8WUX9 453 aaPredicted RBP25.71■■□□□ 1.71
FGFR3-202ENST00000340107 MIER1Q8N108 512 aa25.65■■□□□ 1.7
FGFR3-202ENST00000340107 WIZO95785 1651 aa25.65■■□□□ 1.7
FGFR3-202ENST00000340107 RRP7BPQ9NSQ0 103 aa25.64■■□□□ 1.7
FGFR3-202ENST00000340107 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.54■■□□□ 1.683e-10■□□□□ 11
FGFR3-202ENST00000340107 DAXXQ9UER7 740 aaPredicted RBP25.53■■□□□ 1.68
FGFR3-202ENST00000340107 TSPY4P0CV99 314 aa25.48■■□□□ 1.67
FGFR3-202ENST00000340107 TSPY10P0CW01 314 aa25.48■■□□□ 1.67
FGFR3-202ENST00000340107 CUX2O14529 1486 aa25.47■■□□□ 1.67
FGFR3-202ENST00000340107 KDM2AQ9Y2K7 1162 aa25.44■■□□□ 1.66
FGFR3-202ENST00000340107 CARMIL1Q5VZK9 1371 aa25.44■■□□□ 1.66
FGFR3-202ENST00000340107 HNRNPUQ00839 825 aaKnown RBP eCLIP25.44■■□□□ 1.663e-6■■■□□ 14.8
FGFR3-202ENST00000340107 CLSPNQ9HAW4 1339 aa25.43■■□□□ 1.66
FGFR3-202ENST00000340107 FAM9BQ8IZU0 186 aa25.43■■□□□ 1.66
FGFR3-202ENST00000340107 CHGAP10645 457 aaKnown RBP25.42■■□□□ 1.66
FGFR3-202ENST00000340107 KANK4Q5T7N3 995 aaPredicted RBP25.4■■□□□ 1.66
FGFR3-202ENST00000340107 SIN3AQ96ST3 1273 aa25.4■■□□□ 1.66
FGFR3-202ENST00000340107 SCAF1Q9H7N4 1312 aaKnown RBP25.38■■□□□ 1.65
FGFR3-202ENST00000340107 FKBP8Q14318 412 aa25.38■■□□□ 1.65
FGFR3-202ENST00000340107 KCNH8Q96L42 1107 aa25.38■■□□□ 1.65
FGFR3-202ENST00000340107 TOP2AP11388 1531 aaKnown RBP25.36■■□□□ 1.65
FGFR3-202ENST00000340107 NPM1P06748 294 aaKnown RBP eCLIP25.33■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms