RNA–Protein interactions for RNA: ENST00000457152.3

ARID3A-202, Transcript of AT-rich interaction domain 3A, humanhuman

TSL 5

Gene ARID3A, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3A-202ENST00000457152 NISCHQ9Y2I1 1504 aa33.06■■■□□ 2.88
ARID3A-202ENST00000457152 ABCC9O60706 1549 aa29.79■■■□□ 2.36
ARID3A-202ENST00000457152 CCDC180Q9P1Z9 1646 aa29.55■■■□□ 2.32
ARID3A-202ENST00000457152 RB1CC1Q8TDY2 1594 aa28.2■■■□□ 2.1
ARID3A-202ENST00000457152 DNAJC5BQ9UF47 199 aa28.11■■■□□ 2.09
ARID3A-202ENST00000457152 DCAF8L2P0C7V8 631 aa28.1■■■□□ 2.09
ARID3A-202ENST00000457152 NACADO15069 1562 aa27.99■■■□□ 2.07
ARID3A-202ENST00000457152 PABPN1Q86U42 306 aaKnown RBP eCLIP27.83■■■□□ 2.05
ARID3A-202ENST00000457152 UNC13AQ9UPW8 1703 aa27.61■■■□□ 2.01
ARID3A-202ENST00000457152 MYO15BQ96JP2 1530 aa27.55■■■□□ 2
ARID3A-202ENST00000457152 BICRAQ9NZM4 1560 aa27.48■■□□□ 1.99
ARID3A-202ENST00000457152 ZCCHC6Q5VYS8 1495 aaKnown RBP27.37■■□□□ 1.97
ARID3A-202ENST00000457152 DCAF1Q9Y4B6 1507 aa27.21■■□□□ 1.95
ARID3A-202ENST00000457152 SCRIBQ14160 1630 aa27.07■■□□□ 1.92
ARID3A-202ENST00000457152 SHROOM4Q9ULL8 1493 aa26.9■■□□□ 1.9
ARID3A-202ENST00000457152 CC2D2AQ9P2K1 1620 aa26.85■■□□□ 1.89
ARID3A-202ENST00000457152 CECR2Q9BXF3 1484 aa26.79■■□□□ 1.88
ARID3A-202ENST00000457152 EIF4G1Q04637 1599 aaKnown RBP26.76■■□□□ 1.87
ARID3A-202ENST00000457152 NCAPD3P42695 1498 aa25.91■■□□□ 1.74
ARID3A-202ENST00000457152 ATAD2BQ9ULI0 1458 aa25.85■■□□□ 1.73
ARID3A-202ENST00000457152 SMARCA4P51532 1647 aa25.77■■□□□ 1.72
ARID3A-202ENST00000457152 DNAJC5Q9H3Z4 198 aa25.72■■□□□ 1.71
ARID3A-202ENST00000457152 SMARCA2P51531 1590 aa25.69■■□□□ 1.7
ARID3A-202ENST00000457152 ERCC6Q03468 1493 aa25.65■■□□□ 1.7
ARID3A-202ENST00000457152 HMGXB3Q12766 1538 aa25.64■■□□□ 1.7
ARID3A-202ENST00000457152 NESP48681 1621 aa25.61■■□□□ 1.69
ARID3A-202ENST00000457152 BAZ1AQ9NRL2 1556 aaPredicted RBP25.61■■□□□ 1.69
ARID3A-202ENST00000457152 BAZ1BQ9UIG0 1483 aaKnown RBP25.56■■□□□ 1.68
ARID3A-202ENST00000457152 CUX2O14529 1486 aa25.55■■□□□ 1.68
ARID3A-202ENST00000457152 MROH2BQ7Z745 1585 aa25.53■■□□□ 1.68
ARID3A-202ENST00000457152 PEG3Q9GZU2 1588 aa25.48■■□□□ 1.67
ARID3A-202ENST00000457152 LAMC3Q9Y6N6 1575 aa25.26■■□□□ 1.63
ARID3A-202ENST00000457152 THOC2Q8NI27 1593 aaKnown RBP25.23■■□□□ 1.63
ARID3A-202ENST00000457152 WIZO95785 1651 aa25.21■■□□□ 1.63
ARID3A-202ENST00000457152 KIF21AQ7Z4S6 1674 aa25.18■■□□□ 1.62
ARID3A-202ENST00000457152 PDS5BQ9NTI5 1447 aa25.16■■□□□ 1.62
ARID3A-202ENST00000457152 CADPSQ9ULU8 1353 aa25.15■■□□□ 1.62
ARID3A-202ENST00000457152 RSF1Q96T23 1441 aaPredicted RBP24.99■■□□□ 1.59
ARID3A-202ENST00000457152 MRC2Q9UBG0 1479 aa24.95■■□□□ 1.58
ARID3A-202ENST00000457152 WDR62O43379 1518 aa24.87■■□□□ 1.57
ARID3A-202ENST00000457152 FANCD2Q9BXW9 1451 aa24.85■■□□□ 1.57
ARID3A-202ENST00000457152 CEP164Q9UPV0 1460 aa24.84■■□□□ 1.57
ARID3A-202ENST00000457152 CFTRP13569 1480 aa24.83■■□□□ 1.56
ARID3A-202ENST00000457152 TOP2AP11388 1531 aaKnown RBP24.81■■□□□ 1.56
ARID3A-202ENST00000457152 URB2Q14146 1524 aaKnown RBP24.68■■□□□ 1.54
ARID3A-202ENST00000457152 TRIM41Q8WV44 630 aa24.64■■□□□ 1.54
ARID3A-202ENST00000457152 CCDC88BA6NC98 1476 aa24.63■■□□□ 1.53
ARID3A-202ENST00000457152 OSCARQ8IYS5 282 aa24.5■■□□□ 1.51
ARID3A-202ENST00000457152 PRDM2Q13029 1718 aa24.46■■□□□ 1.51
ARID3A-202ENST00000457152 ZNF608Q9ULD9 1512 aaPredicted RBP24.41■■□□□ 1.5
ARID3A-202ENST00000457152 TOPBP1Q92547 1522 aa24.38■■□□□ 1.49
ARID3A-202ENST00000457152 IFT140Q96RY7 1462 aa24.33■■□□□ 1.49
ARID3A-202ENST00000457152 DNMBPQ6XZF7 1577 aa24.23■■□□□ 1.47
ARID3A-202ENST00000457152 ABCC8Q09428 1581 aa24.22■■□□□ 1.47
ARID3A-202ENST00000457152 AQRO60306 1485 aaKnown RBP eCLIP24.2■■□□□ 1.475e-8■■■□□ 17.8
ARID3A-202ENST00000457152 EIF4G3O43432 1585 aaKnown RBP24.17■■□□□ 1.46
ARID3A-202ENST00000457152 TARBP1Q13395 1621 aaKnown RBP24.14■■□□□ 1.46
ARID3A-202ENST00000457152 RIMBP3CA6NJZ7 1639 aa24.13■■□□□ 1.45
ARID3A-202ENST00000457152 RIMBP3BA6NNM3 1639 aa24.13■■□□□ 1.45
ARID3A-202ENST00000457152 RIMBP3Q9UFD9 1639 aa24.13■■□□□ 1.45
ARID3A-202ENST00000457152 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
ARID3A-202ENST00000457152 RAD54L2Q9Y4B4 1467 aa24.12■■□□□ 1.45
ARID3A-202ENST00000457152 FBLN2P98095 1184 aa24.07■■□□□ 1.44
ARID3A-202ENST00000457152 TDRD9Q8NDG6 1382 aaKnown RBP24.06■■□□□ 1.44
ARID3A-202ENST00000457152 ARHGEF11O15085 1522 aa24.06■■□□□ 1.44
ARID3A-202ENST00000457152 SOGA1O94964 1423 aa24.04■■□□□ 1.44
ARID3A-202ENST00000457152 CHD1O14646 1710 aa24.01■■□□□ 1.43
ARID3A-202ENST00000457152 CYB5RLQ6IPT4 315 aa24■■□□□ 1.43
ARID3A-202ENST00000457152 FGD5Q6ZNL6 1462 aa23.98■■□□□ 1.43
ARID3A-202ENST00000457152 SUPT5HO00267 1087 aaKnown RBP23.97■■□□□ 1.43
ARID3A-202ENST00000457152 CUX1P39880 1505 aa23.97■■□□□ 1.43
ARID3A-202ENST00000457152 SNAPC4Q5SXM2 1469 aa23.88■■□□□ 1.41
ARID3A-202ENST00000457152 ARAP1Q96P48 1450 aa23.84■■□□□ 1.41
ARID3A-202ENST00000457152 CHMP7Q8WUX9 453 aaPredicted RBP23.84■■□□□ 1.41
ARID3A-202ENST00000457152 GRIN2BQ13224 1484 aa23.78■■□□□ 1.4
ARID3A-202ENST00000457152 WDR97A6NE52 1622 aa23.75■■□□□ 1.39
ARID3A-202ENST00000457152 MAGI1Q96QZ7 1491 aaPredicted RBP23.75■■□□□ 1.39
ARID3A-202ENST00000457152 CLASP1Q7Z460 1538 aa23.73■■□□□ 1.39
ARID3A-202ENST00000457152 GAPVD1Q14C86 1478 aa23.72■■□□□ 1.39
ARID3A-202ENST00000457152 TRHP20396 242 aaPredicted RBP23.71■■□□□ 1.39
ARID3A-202ENST00000457152 SYNJ2O15056 1496 aa23.7■■□□□ 1.38
ARID3A-202ENST00000457152 SYNJ1O43426 1573 aa23.67■■□□□ 1.38
ARID3A-202ENST00000457152 ABCA10Q8WWZ4 1543 aa23.67■■□□□ 1.38
ARID3A-202ENST00000457152 PBRM1Q86U86 1689 aa23.66■■□□□ 1.38
ARID3A-202ENST00000457152 ABCA5Q8WWZ7 1642 aa23.62■■□□□ 1.37
ARID3A-202ENST00000457152 WRNQ14191 1432 aaPredicted RBP eCLIP23.58■■□□□ 1.36
ARID3A-202ENST00000457152 TOP2BQ02880 1626 aa23.51■■□□□ 1.35
ARID3A-202ENST00000457152 BIVM-ERCC5R4GMW8 1640 aa23.49■■□□□ 1.35
ARID3A-202ENST00000457152 GRIN2AQ12879 1464 aa23.49■■□□□ 1.35
ARID3A-202ENST00000457152 ERCC6L2Q5T890 1561 aa23.47■■□□□ 1.35
ARID3A-202ENST00000457152 ADAMTS12P58397 1594 aa23.44■■□□□ 1.34
ARID3A-202ENST00000457152 CEP170Q5SW79 1584 aa23.43■■□□□ 1.34
ARID3A-202ENST00000457152 NUP160Q12769 1436 aa23.42■■□□□ 1.34
ARID3A-202ENST00000457152 FHAD1B1AJZ9 1412 aa23.4■■□□□ 1.34
ARID3A-202ENST00000457152 ERICH3Q5RHP9 1530 aa23.33■■□□□ 1.33
ARID3A-202ENST00000457152 SHROOM2Q13796 1616 aa23.27■■□□□ 1.32
ARID3A-202ENST00000457152 JPH4Q96JJ6 628 aa23.25■■□□□ 1.31
ARID3A-202ENST00000457152 PRG4Q92954 1404 aaPredicted RBP23.24■■□□□ 1.31
ARID3A-202ENST00000457152 IGF1RP08069 1367 aa23.15■■□□□ 1.3
ARID3A-202ENST00000457152 RUSC2Q8N2Y8 1516 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms