RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 NISCHQ9Y2I1 1504 aa26.6■■□□□ 1.85
SSBP4-215ENST00000625926 CCDC180Q9P1Z9 1646 aa23.63■■□□□ 1.37
SSBP4-215ENST00000625926 ABCC9O60706 1549 aa23.56■■□□□ 1.36
SSBP4-215ENST00000625926 DNAJC5BQ9UF47 199 aa22.57■■□□□ 1.2
SSBP4-215ENST00000625926 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
SSBP4-215ENST00000625926 RB1CC1Q8TDY2 1594 aa22.48■■□□□ 1.19
SSBP4-215ENST00000625926 NACADO15069 1562 aa22.4■■□□□ 1.18
SSBP4-215ENST00000625926 MYO15BQ96JP2 1530 aa22.2■■□□□ 1.14
SSBP4-215ENST00000625926 ZCCHC6Q5VYS8 1495 aaKnown RBP22.08■■□□□ 1.12
SSBP4-215ENST00000625926 PABPN1Q86U42 306 aaKnown RBP eCLIP22.06■■□□□ 1.127e-9■■■□□ 15.3
SSBP4-215ENST00000625926 DCAF1Q9Y4B6 1507 aa21.98■■□□□ 1.11
SSBP4-215ENST00000625926 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
SSBP4-215ENST00000625926 UNC13AQ9UPW8 1703 aa21.74■■□□□ 1.07
SSBP4-215ENST00000625926 SCRIBQ14160 1630 aa21.6■■□□□ 1.05
SSBP4-215ENST00000625926 DNAJC5Q9H3Z4 198 aa21.6■■□□□ 1.05
SSBP4-215ENST00000625926 SHROOM4Q9ULL8 1493 aa21.58■■□□□ 1.04
SSBP4-215ENST00000625926 EIF4G1Q04637 1599 aaKnown RBP21.26■□□□□ 0.99
SSBP4-215ENST00000625926 CC2D2AQ9P2K1 1620 aa21.22■□□□□ 0.99
SSBP4-215ENST00000625926 CECR2Q9BXF3 1484 aa21.21■□□□□ 0.99
SSBP4-215ENST00000625926 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
SSBP4-215ENST00000625926 ATAD2BQ9ULI0 1458 aa20.69■□□□□ 0.9
SSBP4-215ENST00000625926 SMARCA4P51532 1647 aa20.64■□□□□ 0.89
SSBP4-215ENST00000625926 BAZ1AQ9NRL2 1556 aaPredicted RBP20.63■□□□□ 0.89
SSBP4-215ENST00000625926 SMARCA2P51531 1590 aa20.61■□□□□ 0.89
SSBP4-215ENST00000625926 HMGXB3Q12766 1538 aa20.53■□□□□ 0.88
SSBP4-215ENST00000625926 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
SSBP4-215ENST00000625926 MROH2BQ7Z745 1585 aa20.49■□□□□ 0.87
SSBP4-215ENST00000625926 PEG3Q9GZU2 1588 aa20.46■□□□□ 0.87
SSBP4-215ENST00000625926 ERCC6Q03468 1493 aa20.34■□□□□ 0.85
SSBP4-215ENST00000625926 NESP48681 1621 aa20.28■□□□□ 0.84
SSBP4-215ENST00000625926 RSF1Q96T23 1441 aaPredicted RBP20.21■□□□□ 0.83
SSBP4-215ENST00000625926 CUX2O14529 1486 aa20.21■□□□□ 0.83
SSBP4-215ENST00000625926 WIZO95785 1651 aa20.18■□□□□ 0.82
SSBP4-215ENST00000625926 CADPSQ9ULU8 1353 aa20.15■□□□□ 0.82
SSBP4-215ENST00000625926 LAMC3Q9Y6N6 1575 aa20.15■□□□□ 0.82
SSBP4-215ENST00000625926 PDS5BQ9NTI5 1447 aa20.13■□□□□ 0.81
SSBP4-215ENST00000625926 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
SSBP4-215ENST00000625926 TOP2AP11388 1531 aaKnown RBP20■□□□□ 0.79
SSBP4-215ENST00000625926 THOC2Q8NI27 1593 aaKnown RBP19.94■□□□□ 0.78
SSBP4-215ENST00000625926 CFTRP13569 1480 aa19.93■□□□□ 0.78
SSBP4-215ENST00000625926 MRC2Q9UBG0 1479 aa19.89■□□□□ 0.77
SSBP4-215ENST00000625926 KIF21AQ7Z4S6 1674 aa19.87■□□□□ 0.77
SSBP4-215ENST00000625926 FANCD2Q9BXW9 1451 aa19.87■□□□□ 0.77
SSBP4-215ENST00000625926 CEP164Q9UPV0 1460 aa19.85■□□□□ 0.77
SSBP4-215ENST00000625926 CCDC88BA6NC98 1476 aa19.83■□□□□ 0.76
SSBP4-215ENST00000625926 WDR62O43379 1518 aa19.8■□□□□ 0.76
SSBP4-215ENST00000625926 URB2Q14146 1524 aaKnown RBP19.66■□□□□ 0.74
SSBP4-215ENST00000625926 SUPT5HO00267 1087 aaKnown RBP19.57■□□□□ 0.72
SSBP4-215ENST00000625926 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
SSBP4-215ENST00000625926 TOPBP1Q92547 1522 aa19.5■□□□□ 0.71
SSBP4-215ENST00000625926 IFT140Q96RY7 1462 aa19.48■□□□□ 0.71
SSBP4-215ENST00000625926 PRDM2Q13029 1718 aa19.46■□□□□ 0.71
SSBP4-215ENST00000625926 OSCARQ8IYS5 282 aa19.44■□□□□ 0.7
SSBP4-215ENST00000625926 DNMBPQ6XZF7 1577 aa19.41■□□□□ 0.7
SSBP4-215ENST00000625926 ZNF608Q9ULD9 1512 aaPredicted RBP19.39■□□□□ 0.69
SSBP4-215ENST00000625926 POLA1P09884 1462 aaPredicted RBP19.32■□□□□ 0.68
SSBP4-215ENST00000625926 SOGA1O94964 1423 aa19.3■□□□□ 0.68
SSBP4-215ENST00000625926 AQRO60306 1485 aaKnown RBP eCLIP19.29■□□□□ 0.68
SSBP4-215ENST00000625926 RAD54L2Q9Y4B4 1467 aa19.27■□□□□ 0.67
SSBP4-215ENST00000625926 TDRD9Q8NDG6 1382 aaKnown RBP19.24■□□□□ 0.67
SSBP4-215ENST00000625926 TARBP1Q13395 1621 aaKnown RBP19.24■□□□□ 0.67
SSBP4-215ENST00000625926 FGD5Q6ZNL6 1462 aa19.23■□□□□ 0.67
SSBP4-215ENST00000625926 CUX1P39880 1505 aa19.22■□□□□ 0.67
SSBP4-215ENST00000625926 EIF4G3O43432 1585 aaKnown RBP19.21■□□□□ 0.67
SSBP4-215ENST00000625926 FBLN2P98095 1184 aa19.18■□□□□ 0.66
SSBP4-215ENST00000625926 AEBP2Q6ZN18 517 aaPredicted RBP19.18■□□□□ 0.66
SSBP4-215ENST00000625926 CHMP7Q8WUX9 453 aaPredicted RBP19.09■□□□□ 0.65
SSBP4-215ENST00000625926 WDR97A6NE52 1622 aa19.07■□□□□ 0.64
SSBP4-215ENST00000625926 GRIN2BQ13224 1484 aa19.07■□□□□ 0.64
SSBP4-215ENST00000625926 WRNQ14191 1432 aaPredicted RBP eCLIP19.07■□□□□ 0.64
SSBP4-215ENST00000625926 SNAPC4Q5SXM2 1469 aa19.06■□□□□ 0.64
SSBP4-215ENST00000625926 ABCA10Q8WWZ4 1543 aa19.04■□□□□ 0.64
SSBP4-215ENST00000625926 GAPVD1Q14C86 1478 aa19.03■□□□□ 0.64
SSBP4-215ENST00000625926 MAGI1Q96QZ7 1491 aaPredicted RBP19.03■□□□□ 0.64
SSBP4-215ENST00000625926 RIMBP3CA6NJZ7 1639 aa19.01■□□□□ 0.63
SSBP4-215ENST00000625926 RIMBP3BA6NNM3 1639 aa19.01■□□□□ 0.63
SSBP4-215ENST00000625926 RIMBP3Q9UFD9 1639 aa19.01■□□□□ 0.63
SSBP4-215ENST00000625926 ARHGEF11O15085 1522 aa18.99■□□□□ 0.63
SSBP4-215ENST00000625926 SYNJ2O15056 1496 aa18.97■□□□□ 0.63
SSBP4-215ENST00000625926 TOP2BQ02880 1626 aa18.96■□□□□ 0.63
SSBP4-215ENST00000625926 CYB5RLQ6IPT4 315 aa18.95■□□□□ 0.62
SSBP4-215ENST00000625926 CHD1O14646 1710 aa18.94■□□□□ 0.62
SSBP4-215ENST00000625926 SYNJ1O43426 1573 aa18.93■□□□□ 0.62
SSBP4-215ENST00000625926 BIVM-ERCC5R4GMW8 1640 aa18.9■□□□□ 0.62
SSBP4-215ENST00000625926 ABCA5Q8WWZ7 1642 aa18.89■□□□□ 0.62
SSBP4-215ENST00000625926 CLASP1Q7Z460 1538 aa18.84■□□□□ 0.61
SSBP4-215ENST00000625926 TRHP20396 242 aaPredicted RBP18.83■□□□□ 0.6
SSBP4-215ENST00000625926 FHAD1B1AJZ9 1412 aa18.83■□□□□ 0.6
SSBP4-215ENST00000625926 ARAP1Q96P48 1450 aa18.82■□□□□ 0.6
SSBP4-215ENST00000625926 PBRM1Q86U86 1689 aa18.81■□□□□ 0.6
SSBP4-215ENST00000625926 GRIN2AQ12879 1464 aa18.8■□□□□ 0.6
SSBP4-215ENST00000625926 ERICH3Q5RHP9 1530 aa18.78■□□□□ 0.6
SSBP4-215ENST00000625926 ADAMTS12P58397 1594 aa18.75■□□□□ 0.59
SSBP4-215ENST00000625926 NUP160Q12769 1436 aa18.74■□□□□ 0.59
SSBP4-215ENST00000625926 KIF27Q86VH2 1401 aa18.71■□□□□ 0.59
SSBP4-215ENST00000625926 IGF1RP08069 1367 aa18.69■□□□□ 0.58
SSBP4-215ENST00000625926 ILDR1Q86SU0 546 aaPredicted RBP18.69■□□□□ 0.58
SSBP4-215ENST00000625926 CEP170Q5SW79 1584 aa18.67■□□□□ 0.58
SSBP4-215ENST00000625926 JPH4Q96JJ6 628 aa18.64■□□□□ 0.57
SSBP4-215ENST00000625926 PRG4Q92954 1404 aaPredicted RBP18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms