RNA–Protein interactions for RNA: ENST00000590162.1

TMC6-214, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-214ENST00000590162 NISCHQ9Y2I1 1504 aa36.89■■■■□ 3.5
TMC6-214ENST00000590162 CCDC180Q9P1Z9 1646 aa33.02■■■□□ 2.88
TMC6-214ENST00000590162 ABCC9O60706 1549 aa32.66■■■□□ 2.82
TMC6-214ENST00000590162 RB1CC1Q8TDY2 1594 aa31.3■■■□□ 2.6
TMC6-214ENST00000590162 NACADO15069 1562 aa31.14■■■□□ 2.58
TMC6-214ENST00000590162 DCAF8L2P0C7V8 631 aa31.06■■■□□ 2.56
TMC6-214ENST00000590162 MYO15BQ96JP2 1530 aa30.82■■■□□ 2.52
TMC6-214ENST00000590162 ZCCHC6Q5VYS8 1495 aaKnown RBP30.64■■■□□ 2.5
TMC6-214ENST00000590162 DCAF1Q9Y4B6 1507 aa30.52■■■□□ 2.48
TMC6-214ENST00000590162 UNC13AQ9UPW8 1703 aa30.44■■■□□ 2.46
TMC6-214ENST00000590162 PABPN1Q86U42 306 aaKnown RBP eCLIP30.42■■■□□ 2.46
TMC6-214ENST00000590162 BICRAQ9NZM4 1560 aa30.23■■■□□ 2.43
TMC6-214ENST00000590162 DNAJC5BQ9UF47 199 aa30.2■■■□□ 2.43
TMC6-214ENST00000590162 SCRIBQ14160 1630 aa30.07■■■□□ 2.4
TMC6-214ENST00000590162 SHROOM4Q9ULL8 1493 aa30.05■■■□□ 2.4
TMC6-214ENST00000590162 EIF4G1Q04637 1599 aaKnown RBP29.54■■■□□ 2.32
TMC6-214ENST00000590162 CC2D2AQ9P2K1 1620 aa29.51■■■□□ 2.31
TMC6-214ENST00000590162 CECR2Q9BXF3 1484 aa29.42■■■□□ 2.3
TMC6-214ENST00000590162 SMARCA4P51532 1647 aa28.72■■■□□ 2.19
TMC6-214ENST00000590162 NCAPD3P42695 1498 aa28.7■■■□□ 2.18
TMC6-214ENST00000590162 BAZ1AQ9NRL2 1556 aaPredicted RBP28.68■■■□□ 2.18
TMC6-214ENST00000590162 SMARCA2P51531 1590 aa28.67■■■□□ 2.18
TMC6-214ENST00000590162 ATAD2BQ9ULI0 1458 aa28.65■■■□□ 2.18
TMC6-214ENST00000590162 HMGXB3Q12766 1538 aa28.56■■■□□ 2.16
TMC6-214ENST00000590162 BAZ1BQ9UIG0 1483 aaKnown RBP28.46■■■□□ 2.15
TMC6-214ENST00000590162 PEG3Q9GZU2 1588 aa28.43■■■□□ 2.14
TMC6-214ENST00000590162 MROH2BQ7Z745 1585 aa28.38■■■□□ 2.13
TMC6-214ENST00000590162 ERCC6Q03468 1493 aa28.27■■■□□ 2.12
TMC6-214ENST00000590162 NESP48681 1621 aa28.1■■■□□ 2.09
TMC6-214ENST00000590162 CUX2O14529 1486 aa28.08■■■□□ 2.09
TMC6-214ENST00000590162 WIZO95785 1651 aa28.07■■■□□ 2.08
TMC6-214ENST00000590162 LAMC3Q9Y6N6 1575 aa28.06■■■□□ 2.08
TMC6-214ENST00000590162 RSF1Q96T23 1441 aaPredicted RBP27.93■■■□□ 2.06
TMC6-214ENST00000590162 PDS5BQ9NTI5 1447 aa27.92■■■□□ 2.06
TMC6-214ENST00000590162 CADPSQ9ULU8 1353 aa27.86■■■□□ 2.05
TMC6-214ENST00000590162 TOP2AP11388 1531 aaKnown RBP27.8■■■□□ 2.04
TMC6-214ENST00000590162 THOC2Q8NI27 1593 aaKnown RBP27.78■■■□□ 2.04
TMC6-214ENST00000590162 KIF21AQ7Z4S6 1674 aa27.78■■■□□ 2.04
TMC6-214ENST00000590162 DNAJC5Q9H3Z4 198 aa27.77■■■□□ 2.04
TMC6-214ENST00000590162 MRC2Q9UBG0 1479 aa27.62■■■□□ 2.01
TMC6-214ENST00000590162 CFTRP13569 1480 aa27.6■■■□□ 2.01
TMC6-214ENST00000590162 CEP164Q9UPV0 1460 aa27.59■■■□□ 2.01
TMC6-214ENST00000590162 FANCD2Q9BXW9 1451 aa27.56■■■□□ 2
TMC6-214ENST00000590162 WDR62O43379 1518 aa27.51■■□□□ 1.99
TMC6-214ENST00000590162 CCDC88BA6NC98 1476 aa27.43■■□□□ 1.98
TMC6-214ENST00000590162 PRDM2Q13029 1718 aa27.37■■□□□ 1.97
TMC6-214ENST00000590162 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.95
TMC6-214ENST00000590162 ABCC8Q09428 1581 aa27.1■■□□□ 1.93
TMC6-214ENST00000590162 TOPBP1Q92547 1522 aa27.05■■□□□ 1.92
TMC6-214ENST00000590162 IFT140Q96RY7 1462 aa27.02■■□□□ 1.92
TMC6-214ENST00000590162 DNMBPQ6XZF7 1577 aa27.01■■□□□ 1.91
TMC6-214ENST00000590162 SUPT5HO00267 1087 aaKnown RBP26.99■■□□□ 1.91
TMC6-214ENST00000590162 ZNF608Q9ULD9 1512 aaPredicted RBP26.85■■□□□ 1.89
TMC6-214ENST00000590162 OSCARQ8IYS5 282 aa26.85■■□□□ 1.89
TMC6-214ENST00000590162 POLA1P09884 1462 aaPredicted RBP26.79■■□□□ 1.88
TMC6-214ENST00000590162 EIF4G3O43432 1585 aaKnown RBP26.79■■□□□ 1.88
TMC6-214ENST00000590162 TARBP1Q13395 1621 aaKnown RBP26.75■■□□□ 1.87
TMC6-214ENST00000590162 SOGA1O94964 1423 aa26.7■■□□□ 1.86
TMC6-214ENST00000590162 FGD5Q6ZNL6 1462 aa26.68■■□□□ 1.86
TMC6-214ENST00000590162 AQRO60306 1485 aaKnown RBP eCLIP26.67■■□□□ 1.869e-19■■■■■ 33
TMC6-214ENST00000590162 CUX1P39880 1505 aa26.66■■□□□ 1.86
TMC6-214ENST00000590162 RAD54L2Q9Y4B4 1467 aa26.65■■□□□ 1.86
TMC6-214ENST00000590162 WDR97A6NE52 1622 aa26.62■■□□□ 1.85
TMC6-214ENST00000590162 TRIM41Q8WV44 630 aa26.6■■□□□ 1.85
TMC6-214ENST00000590162 TDRD9Q8NDG6 1382 aaKnown RBP26.58■■□□□ 1.84
TMC6-214ENST00000590162 FBLN2P98095 1184 aa26.53■■□□□ 1.84
TMC6-214ENST00000590162 CHD1O14646 1710 aa26.49■■□□□ 1.83
TMC6-214ENST00000590162 GRIN2BQ13224 1484 aa26.46■■□□□ 1.83
TMC6-214ENST00000590162 SNAPC4Q5SXM2 1469 aa26.45■■□□□ 1.82
TMC6-214ENST00000590162 MAGI1Q96QZ7 1491 aaPredicted RBP26.43■■□□□ 1.82
TMC6-214ENST00000590162 WRNQ14191 1432 aaPredicted RBP eCLIP26.41■■□□□ 1.82
TMC6-214ENST00000590162 ABCA10Q8WWZ4 1543 aa26.4■■□□□ 1.82
TMC6-214ENST00000590162 RIMBP3CA6NJZ7 1639 aa26.4■■□□□ 1.82
TMC6-214ENST00000590162 RIMBP3BA6NNM3 1639 aa26.4■■□□□ 1.82
TMC6-214ENST00000590162 RIMBP3Q9UFD9 1639 aa26.4■■□□□ 1.82
TMC6-214ENST00000590162 GAPVD1Q14C86 1478 aa26.39■■□□□ 1.82
TMC6-214ENST00000590162 CHMP7Q8WUX9 453 aaPredicted RBP26.39■■□□□ 1.82
TMC6-214ENST00000590162 TOP2BQ02880 1626 aa26.37■■□□□ 1.81
TMC6-214ENST00000590162 ARHGEF11O15085 1522 aa26.37■■□□□ 1.81
TMC6-214ENST00000590162 BIVM-ERCC5R4GMW8 1640 aa26.36■■□□□ 1.81
TMC6-214ENST00000590162 PBRM1Q86U86 1689 aa26.34■■□□□ 1.81
TMC6-214ENST00000590162 SYNJ2O15056 1496 aa26.33■■□□□ 1.81
TMC6-214ENST00000590162 ABCA5Q8WWZ7 1642 aa26.32■■□□□ 1.8
TMC6-214ENST00000590162 SYNJ1O43426 1573 aa26.3■■□□□ 1.8
TMC6-214ENST00000590162 CLASP1Q7Z460 1538 aa26.2■■□□□ 1.79
TMC6-214ENST00000590162 CYB5RLQ6IPT4 315 aa26.16■■□□□ 1.78
TMC6-214ENST00000590162 ADAMTS12P58397 1594 aa26.12■■□□□ 1.77
TMC6-214ENST00000590162 ERICH3Q5RHP9 1530 aa26.11■■□□□ 1.77
TMC6-214ENST00000590162 ARAP1Q96P48 1450 aa26.11■■□□□ 1.77
TMC6-214ENST00000590162 GRIN2AQ12879 1464 aa26.1■■□□□ 1.77
TMC6-214ENST00000590162 FHAD1B1AJZ9 1412 aa26.08■■□□□ 1.77
TMC6-214ENST00000590162 NUP160Q12769 1436 aa25.97■■□□□ 1.75
TMC6-214ENST00000590162 CEP170Q5SW79 1584 aa25.95■■□□□ 1.74
TMC6-214ENST00000590162 KIF27Q86VH2 1401 aa25.92■■□□□ 1.74
TMC6-214ENST00000590162 TRHP20396 242 aaPredicted RBP25.85■■□□□ 1.73
TMC6-214ENST00000590162 CUL7Q14999 1698 aa25.82■■□□□ 1.72
TMC6-214ENST00000590162 SHROOM2Q13796 1616 aa25.81■■□□□ 1.72
TMC6-214ENST00000590162 IGF1RP08069 1367 aa25.78■■□□□ 1.72
TMC6-214ENST00000590162 ERCC6L2Q5T890 1561 aa25.74■■□□□ 1.71
TMC6-214ENST00000590162 RUSC2Q8N2Y8 1516 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms