RNA–Protein interactions for RNA: ENST00000587532.5

ARID3A-205, Transcript of AT-rich interaction domain 3A, humanhuman

TSL 5

Gene ARID3A, Length 1,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3A-205ENST00000587532 NISCHQ9Y2I1 1504 aa46.23■■■■■ 4.99
ARID3A-205ENST00000587532 ABCC9O60706 1549 aa41.71■■■■■ 4.27
ARID3A-205ENST00000587532 CCDC180Q9P1Z9 1646 aa41.57■■■■■ 4.25
ARID3A-205ENST00000587532 RB1CC1Q8TDY2 1594 aa39.63■■■■□ 3.93
ARID3A-205ENST00000587532 NACADO15069 1562 aa39.3■■■■□ 3.88
ARID3A-205ENST00000587532 DNAJC5BQ9UF47 199 aa39.19■■■■□ 3.86
ARID3A-205ENST00000587532 DCAF8L2P0C7V8 631 aa39.1■■■■□ 3.85
ARID3A-205ENST00000587532 PABPN1Q86U42 306 aaKnown RBP eCLIP38.79■■■■□ 3.8
ARID3A-205ENST00000587532 UNC13AQ9UPW8 1703 aa38.77■■■■□ 3.8
ARID3A-205ENST00000587532 MYO15BQ96JP2 1530 aa38.68■■■■□ 3.78
ARID3A-205ENST00000587532 BICRAQ9NZM4 1560 aa38.48■■■■□ 3.75
ARID3A-205ENST00000587532 ZCCHC6Q5VYS8 1495 aaKnown RBP38.3■■■■□ 3.72
ARID3A-205ENST00000587532 DCAF1Q9Y4B6 1507 aa38.16■■■■□ 3.7
ARID3A-205ENST00000587532 SHROOM4Q9ULL8 1493 aa37.92■■■■□ 3.66
ARID3A-205ENST00000587532 SCRIBQ14160 1630 aa37.91■■■■□ 3.66
ARID3A-205ENST00000587532 CC2D2AQ9P2K1 1620 aa37.67■■■■□ 3.62
ARID3A-205ENST00000587532 CECR2Q9BXF3 1484 aa37.57■■■■□ 3.6
ARID3A-205ENST00000587532 EIF4G1Q04637 1599 aaKnown RBP37.55■■■■□ 3.6
ARID3A-205ENST00000587532 NCAPD3P42695 1498 aa36.26■■■■□ 3.4
ARID3A-205ENST00000587532 ATAD2BQ9ULI0 1458 aa36.16■■■■□ 3.38
ARID3A-205ENST00000587532 SMARCA4P51532 1647 aa36.12■■■■□ 3.37
ARID3A-205ENST00000587532 SMARCA2P51531 1590 aa36.06■■■■□ 3.36
ARID3A-205ENST00000587532 DNAJC5Q9H3Z4 198 aa36.06■■■■□ 3.36
ARID3A-205ENST00000587532 ERCC6Q03468 1493 aa36.03■■■■□ 3.36
ARID3A-205ENST00000587532 HMGXB3Q12766 1538 aa36.02■■■■□ 3.36
ARID3A-205ENST00000587532 CUX2O14529 1486 aa35.97■■■■□ 3.35
ARID3A-205ENST00000587532 BAZ1AQ9NRL2 1556 aaPredicted RBP35.91■■■■□ 3.34
ARID3A-205ENST00000587532 BAZ1BQ9UIG0 1483 aaKnown RBP35.83■■■■□ 3.33
ARID3A-205ENST00000587532 NESP48681 1621 aa35.79■■■■□ 3.32
ARID3A-205ENST00000587532 PEG3Q9GZU2 1588 aa35.73■■■■□ 3.31
ARID3A-205ENST00000587532 MROH2BQ7Z745 1585 aa35.64■■■■□ 3.3
ARID3A-205ENST00000587532 LAMC3Q9Y6N6 1575 aa35.51■■■■□ 3.27
ARID3A-205ENST00000587532 THOC2Q8NI27 1593 aaKnown RBP35.47■■■■□ 3.27
ARID3A-205ENST00000587532 KIF21AQ7Z4S6 1674 aa35.36■■■■□ 3.25
ARID3A-205ENST00000587532 PDS5BQ9NTI5 1447 aa35.29■■■■□ 3.24
ARID3A-205ENST00000587532 WIZO95785 1651 aa35.23■■■■□ 3.23
ARID3A-205ENST00000587532 CADPSQ9ULU8 1353 aa35.16■■■■□ 3.22
ARID3A-205ENST00000587532 MRC2Q9UBG0 1479 aa35.02■■■■□ 3.2
ARID3A-205ENST00000587532 WDR62O43379 1518 aa34.93■■■■□ 3.18
ARID3A-205ENST00000587532 CEP164Q9UPV0 1460 aa34.86■■■■□ 3.17
ARID3A-205ENST00000587532 RSF1Q96T23 1441 aaPredicted RBP34.83■■■■□ 3.17
ARID3A-205ENST00000587532 FANCD2Q9BXW9 1451 aa34.8■■■■□ 3.16
ARID3A-205ENST00000587532 TOP2AP11388 1531 aaKnown RBP34.76■■■■□ 3.16
ARID3A-205ENST00000587532 CFTRP13569 1480 aa34.74■■■■□ 3.15
ARID3A-205ENST00000587532 URB2Q14146 1524 aaKnown RBP34.53■■■■□ 3.12
ARID3A-205ENST00000587532 TRIM41Q8WV44 630 aa34.5■■■■□ 3.11
ARID3A-205ENST00000587532 PRDM2Q13029 1718 aa34.45■■■■□ 3.11
ARID3A-205ENST00000587532 CCDC88BA6NC98 1476 aa34.34■■■■□ 3.09
ARID3A-205ENST00000587532 OSCARQ8IYS5 282 aa34.28■■■■□ 3.08
ARID3A-205ENST00000587532 IFT140Q96RY7 1462 aa34.15■■■■□ 3.06
ARID3A-205ENST00000587532 TOPBP1Q92547 1522 aa34.13■■■■□ 3.05
ARID3A-205ENST00000587532 ZNF608Q9ULD9 1512 aaPredicted RBP34.13■■■■□ 3.05
ARID3A-205ENST00000587532 ABCC8Q09428 1581 aa34.01■■■■□ 3.03
ARID3A-205ENST00000587532 DNMBPQ6XZF7 1577 aa34■■■■□ 3.03
ARID3A-205ENST00000587532 EIF4G3O43432 1585 aaKnown RBP33.96■■■■□ 3.03
ARID3A-205ENST00000587532 RIMBP3CA6NJZ7 1639 aa33.92■■■■□ 3.02
ARID3A-205ENST00000587532 RIMBP3BA6NNM3 1639 aa33.92■■■■□ 3.02
ARID3A-205ENST00000587532 RIMBP3Q9UFD9 1639 aa33.92■■■■□ 3.02
ARID3A-205ENST00000587532 TARBP1Q13395 1621 aaKnown RBP33.83■■■■□ 3.01
ARID3A-205ENST00000587532 AQRO60306 1485 aaKnown RBP eCLIP33.79■■■■□ 36e-8■■■■□ 22.8
ARID3A-205ENST00000587532 ARHGEF11O15085 1522 aa33.79■■■■□ 3
ARID3A-205ENST00000587532 POLA1P09884 1462 aaPredicted RBP33.77■■■■□ 3
ARID3A-205ENST00000587532 CHD1O14646 1710 aa33.75■■■□□ 2.99
ARID3A-205ENST00000587532 RAD54L2Q9Y4B4 1467 aa33.66■■■□□ 2.98
ARID3A-205ENST00000587532 FBLN2P98095 1184 aa33.61■■■□□ 2.97
ARID3A-205ENST00000587532 SOGA1O94964 1423 aa33.59■■■□□ 2.97
ARID3A-205ENST00000587532 TDRD9Q8NDG6 1382 aaKnown RBP33.56■■■□□ 2.96
ARID3A-205ENST00000587532 FGD5Q6ZNL6 1462 aa33.55■■■□□ 2.96
ARID3A-205ENST00000587532 CYB5RLQ6IPT4 315 aa33.51■■■□□ 2.95
ARID3A-205ENST00000587532 CUX1P39880 1505 aa33.49■■■□□ 2.95
ARID3A-205ENST00000587532 WDR97A6NE52 1622 aa33.47■■■□□ 2.95
ARID3A-205ENST00000587532 SNAPC4Q5SXM2 1469 aa33.47■■■□□ 2.95
ARID3A-205ENST00000587532 ARAP1Q96P48 1450 aa33.44■■■□□ 2.94
ARID3A-205ENST00000587532 MAGI1Q96QZ7 1491 aaPredicted RBP33.34■■■□□ 2.93
ARID3A-205ENST00000587532 GRIN2BQ13224 1484 aa33.33■■■□□ 2.93
ARID3A-205ENST00000587532 CHMP7Q8WUX9 453 aaPredicted RBP33.31■■■□□ 2.92
ARID3A-205ENST00000587532 CLASP1Q7Z460 1538 aa33.31■■■□□ 2.92
ARID3A-205ENST00000587532 SYNJ1O43426 1573 aa33.3■■■□□ 2.92
ARID3A-205ENST00000587532 PBRM1Q86U86 1689 aa33.25■■■□□ 2.91
ARID3A-205ENST00000587532 SYNJ2O15056 1496 aa33.24■■■□□ 2.91
ARID3A-205ENST00000587532 SUPT5HO00267 1087 aaKnown RBP33.23■■■□□ 2.91
ARID3A-205ENST00000587532 TRHP20396 242 aaPredicted RBP33.21■■■□□ 2.91
ARID3A-205ENST00000587532 GAPVD1Q14C86 1478 aa33.19■■■□□ 2.9
ARID3A-205ENST00000587532 ABCA10Q8WWZ4 1543 aa33.14■■■□□ 2.9
ARID3A-205ENST00000587532 ABCA5Q8WWZ7 1642 aa33.13■■■□□ 2.89
ARID3A-205ENST00000587532 WRNQ14191 1432 aaPredicted RBP eCLIP32.97■■■□□ 2.87
ARID3A-205ENST00000587532 BIVM-ERCC5R4GMW8 1640 aa32.94■■■□□ 2.86
ARID3A-205ENST00000587532 TOP2BQ02880 1626 aa32.92■■■□□ 2.86
ARID3A-205ENST00000587532 GRIN2AQ12879 1464 aa32.91■■■□□ 2.86
ARID3A-205ENST00000587532 ADAMTS12P58397 1594 aa32.91■■■□□ 2.86
ARID3A-205ENST00000587532 CEP170Q5SW79 1584 aa32.82■■■□□ 2.84
ARID3A-205ENST00000587532 ERCC6L2Q5T890 1561 aa32.8■■■□□ 2.84
ARID3A-205ENST00000587532 NUP160Q12769 1436 aa32.78■■■□□ 2.84
ARID3A-205ENST00000587532 FHAD1B1AJZ9 1412 aa32.77■■■□□ 2.84
ARID3A-205ENST00000587532 ERICH3Q5RHP9 1530 aa32.72■■■□□ 2.83
ARID3A-205ENST00000587532 SHROOM2Q13796 1616 aa32.68■■■□□ 2.82
ARID3A-205ENST00000587532 PRG4Q92954 1404 aaPredicted RBP32.5■■■□□ 2.79
ARID3A-205ENST00000587532 RUSC2Q8N2Y8 1516 aa32.45■■■□□ 2.78
ARID3A-205ENST00000587532 JPH4Q96JJ6 628 aa32.43■■■□□ 2.78
ARID3A-205ENST00000587532 KIF13AQ9H1H9 1805 aa32.33■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms