RNA–Protein interactions for RNA: ENST00000440486.6

FGFR3-205, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FGFR3, Length 4,287 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-205ENST00000440486 NISCHQ9Y2I1 1504 aa33■■■□□ 2.87
FGFR3-205ENST00000440486 DCAF8L2P0C7V8 631 aa32.34■■■□□ 2.77
FGFR3-205ENST00000440486 SUPT5HO00267 1087 aaKnown RBP31.34■■■□□ 2.61
FGFR3-205ENST00000440486 SHROOM4Q9ULL8 1493 aa31.17■■■□□ 2.58
FGFR3-205ENST00000440486 EHMT2Q96KQ7 1210 aa29.95■■■□□ 2.39
FGFR3-205ENST00000440486 FAM9AQ8IZU1 332 aaPredicted RBP29.42■■■□□ 2.3
FGFR3-205ENST00000440486 PCGF6Q9BYE7 350 aa29.32■■■□□ 2.28
FGFR3-205ENST00000440486 TTBK1Q5TCY1 1321 aaPredicted RBP28.9■■■□□ 2.22
FGFR3-205ENST00000440486 TRIM41Q8WV44 630 aa28.89■■■□□ 2.22
FGFR3-205ENST00000440486 CHIC1Q5VXU3 224 aa28.59■■■□□ 2.17
FGFR3-205ENST00000440486 APLP2Q06481 763 aa28.56■■■□□ 2.16
FGFR3-205ENST00000440486 RANGAP1P46060 587 aaPredicted RBP28.48■■■□□ 2.15
FGFR3-205ENST00000440486 LOC105371045A0A1W2PR82 267 aa28.48■■■□□ 2.15
FGFR3-205ENST00000440486 PPARGC1BQ86YN6 1023 aaKnown RBP28.38■■■□□ 2.13
FGFR3-205ENST00000440486 UBTFP17480 764 aaKnown RBP28.25■■■□□ 2.11
FGFR3-205ENST00000440486 CCER1Q8TC90 406 aaPredicted RBP28.23■■■□□ 2.11
FGFR3-205ENST00000440486 ZEB1P37275 1124 aaPredicted RBP28.13■■■□□ 2.09
FGFR3-205ENST00000440486 HRCP23327 699 aa28.11■■■□□ 2.09
FGFR3-205ENST00000440486 TRIM26Q12899 539 aaPredicted RBP28.07■■■□□ 2.08
FGFR3-205ENST00000440486 ATP1B4Q9UN42 357 aaPredicted RBP27.82■■■□□ 2.04
FGFR3-205ENST00000440486 ABCC9O60706 1549 aa27.77■■■□□ 2.04
FGFR3-205ENST00000440486 CENPBP07199 599 aaPredicted RBP27.64■■■□□ 2.02
FGFR3-205ENST00000440486 PELP1Q8IZL8 1130 aaKnown RBP27.55■■■□□ 2
FGFR3-205ENST00000440486 YTHDC1Q96MU7 727 aaKnown RBP27.52■■■□□ 2
FGFR3-205ENST00000440486 PABPN1Q86U42 306 aaKnown RBP eCLIP27.5■■□□□ 1.996e-7■■■□□ 14.8
FGFR3-205ENST00000440486 ZCCHC6Q5VYS8 1495 aaKnown RBP27.46■■□□□ 1.99
FGFR3-205ENST00000440486 HNRNPUL2Q1KMD3 747 aaKnown RBP27.42■■□□□ 1.98
FGFR3-205ENST00000440486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.42■■□□□ 1.98
FGFR3-205ENST00000440486 ITGAEP38570 1179 aa27.35■■□□□ 1.97
FGFR3-205ENST00000440486 SCRIBQ14160 1630 aa27.01■■□□□ 1.91
FGFR3-205ENST00000440486 CCDC180Q9P1Z9 1646 aa26.93■■□□□ 1.9
FGFR3-205ENST00000440486 DIEXFQ68CQ4 756 aaKnown RBP26.91■■□□□ 1.9
FGFR3-205ENST00000440486 MYO15BQ96JP2 1530 aa26.86■■□□□ 1.89
FGFR3-205ENST00000440486 CSRNP3Q8WYN3 585 aa26.79■■□□□ 1.88
FGFR3-205ENST00000440486 NEFLP07196 543 aa26.72■■□□□ 1.87
FGFR3-205ENST00000440486 DCAF1Q9Y4B6 1507 aa26.64■■□□□ 1.85
FGFR3-205ENST00000440486 FAM50AQ14320 339 aaKnown RBP26.63■■□□□ 1.85
FGFR3-205ENST00000440486 RSF1Q96T23 1441 aaPredicted RBP26.54■■□□□ 1.84
FGFR3-205ENST00000440486 CNGB1Q14028 1251 aaPredicted RBP26.53■■□□□ 1.84
FGFR3-205ENST00000440486 POLR3GLQ9BT43 218 aa26.53■■□□□ 1.84
FGFR3-205ENST00000440486 ERICH6Q7L0X2 663 aa26.49■■□□□ 1.83
FGFR3-205ENST00000440486 NEUROD1Q13562 356 aa26.47■■□□□ 1.83
FGFR3-205ENST00000440486 P3H3Q8IVL6 736 aa26.43■■□□□ 1.82
FGFR3-205ENST00000440486 ZNF316A6NFI3 1004 aaPredicted RBP26.39■■□□□ 1.81
FGFR3-205ENST00000440486 GTF3C3Q9Y5Q9 886 aa26.39■■□□□ 1.81
FGFR3-205ENST00000440486 TRIM52Q96A61 297 aa26.24■■□□□ 1.79
FGFR3-205ENST00000440486 MYT1LQ9UL68 1186 aa26.19■■□□□ 1.78
FGFR3-205ENST00000440486 ARID3CA6NKF2 412 aa26.16■■□□□ 1.78
FGFR3-205ENST00000440486 ACIN1Q9UKV3 1341 aaKnown RBP26.14■■□□□ 1.78
FGFR3-205ENST00000440486 CECR2Q9BXF3 1484 aa26.12■■□□□ 1.77
FGFR3-205ENST00000440486 BCANQ96GW7 911 aa26.04■■□□□ 1.76
FGFR3-205ENST00000440486 FBLN2P98095 1184 aa26.03■■□□□ 1.76
FGFR3-205ENST00000440486 RB1CC1Q8TDY2 1594 aa25.99■■□□□ 1.75
FGFR3-205ENST00000440486 NACADO15069 1562 aa25.96■■□□□ 1.75
FGFR3-205ENST00000440486 ZNF326Q5BKZ1 582 aaKnown RBP25.95■■□□□ 1.74
FGFR3-205ENST00000440486 CEP162Q5TB80 1403 aa25.92■■□□□ 1.74
FGFR3-205ENST00000440486 CLIP1P30622 1438 aa25.91■■□□□ 1.74
FGFR3-205ENST00000440486 ANP32CO43423 234 aa25.91■■□□□ 1.74
FGFR3-205ENST00000440486 MYT1Q01538 1121 aa25.84■■□□□ 1.73
FGFR3-205ENST00000440486 WRNQ14191 1432 aaPredicted RBP eCLIP25.82■■□□□ 1.723e-7■■■□□ 16.4
FGFR3-205ENST00000440486 MROH2BQ7Z745 1585 aa25.75■■□□□ 1.71
FGFR3-205ENST00000440486 SCAF1Q9H7N4 1312 aaKnown RBP25.73■■□□□ 1.71
FGFR3-205ENST00000440486 GOLGA3Q08378 1498 aa25.73■■□□□ 1.71
FGFR3-205ENST00000440486 MIER1Q8N108 512 aa25.72■■□□□ 1.71
FGFR3-205ENST00000440486 DDX10Q13206 875 aaKnown RBP25.72■■□□□ 1.71
FGFR3-205ENST00000440486 ZNF777Q9ULD5 760 aaPredicted RBP25.72■■□□□ 1.71
FGFR3-205ENST00000440486 EEA1Q15075 1411 aa25.71■■□□□ 1.71
FGFR3-205ENST00000440486 BAZ1AQ9NRL2 1556 aaPredicted RBP25.7■■□□□ 1.7
FGFR3-205ENST00000440486 TNIKQ9UKE5 1360 aa25.69■■□□□ 1.7
FGFR3-205ENST00000440486 SOGA1O94964 1423 aa25.68■■□□□ 1.7
FGFR3-205ENST00000440486 SLC4A1APQ9BWU0 796 aaKnown RBP25.66■■□□□ 1.7
FGFR3-205ENST00000440486 CHIC2Q9UKJ5 165 aa25.65■■□□□ 1.7
FGFR3-205ENST00000440486 BAZ1BQ9UIG0 1483 aaKnown RBP25.62■■□□□ 1.69
FGFR3-205ENST00000440486 HIRIP3Q9BW71 556 aaPredicted RBP25.61■■□□□ 1.69
FGFR3-205ENST00000440486 TONSLQ96HA7 1378 aa25.59■■□□□ 1.69
FGFR3-205ENST00000440486 ABCC8Q09428 1581 aa25.52■■□□□ 1.68
FGFR3-205ENST00000440486 CEP164Q9UPV0 1460 aa25.49■■□□□ 1.67
FGFR3-205ENST00000440486 CDK11AQ9UQ88 783 aaPredicted RBP25.49■■□□□ 1.67
FGFR3-205ENST00000440486 CCDC88BA6NC98 1476 aa25.48■■□□□ 1.67
FGFR3-205ENST00000440486 DAXXQ9UER7 740 aaPredicted RBP25.48■■□□□ 1.67
FGFR3-205ENST00000440486 MTUS2Q5JR59 1369 aa25.46■■□□□ 1.67
FGFR3-205ENST00000440486 FKBP8Q14318 412 aa25.44■■□□□ 1.66
FGFR3-205ENST00000440486 KIF27Q86VH2 1401 aa25.39■■□□□ 1.66
FGFR3-205ENST00000440486 WIZO95785 1651 aa25.39■■□□□ 1.66
FGFR3-205ENST00000440486 HNRNPUQ00839 825 aaKnown RBP eCLIP25.38■■□□□ 1.653e-6■■■□□ 14.8
FGFR3-205ENST00000440486 RRP7BPQ9NSQ0 103 aa25.35■■□□□ 1.65
FGFR3-205ENST00000440486 FAM9BQ8IZU0 186 aa25.32■■□□□ 1.64
FGFR3-205ENST00000440486 CLSPNQ9HAW4 1339 aa25.29■■□□□ 1.64
FGFR3-205ENST00000440486 SIN3AQ96ST3 1273 aa25.25■■□□□ 1.63
FGFR3-205ENST00000440486 KANK4Q5T7N3 995 aaPredicted RBP25.2■■□□□ 1.63
FGFR3-205ENST00000440486 CHMP7Q8WUX9 453 aaPredicted RBP25.16■■□□□ 1.62
FGFR3-205ENST00000440486 SALL2Q9Y467 1007 aaPredicted RBP25.15■■□□□ 1.62
FGFR3-205ENST00000440486 RTL5Q5HYW3 569 aaPredicted RBP25.15■■□□□ 1.62
FGFR3-205ENST00000440486 KDM2AQ9Y2K7 1162 aa25.15■■□□□ 1.62
FGFR3-205ENST00000440486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.14■■□□□ 1.623e-10■□□□□ 11
FGFR3-205ENST00000440486 VPS8Q8N3P4 1428 aa25.13■■□□□ 1.61
FGFR3-205ENST00000440486 CUX2O14529 1486 aa25.11■■□□□ 1.61
FGFR3-205ENST00000440486 IRX6P78412 446 aaPredicted RBP25.1■■□□□ 1.61
FGFR3-205ENST00000440486 CCNB3Q8WWL7 1395 aa25.1■■□□□ 1.61
FGFR3-205ENST00000440486 RUSC2Q8N2Y8 1516 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 1126.8 ms