RNA–Protein interactions for RNA: ENST00000613647.4

FGFR3-210, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 5 BASIC

Gene FGFR3, Length 4,438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-210ENST00000613647 NISCHQ9Y2I1 1504 aa35.25■■■■□ 3.23
FGFR3-210ENST00000613647 DCAF8L2P0C7V8 631 aa34.88■■■■□ 3.17
FGFR3-210ENST00000613647 SUPT5HO00267 1087 aaKnown RBP33.5■■■□□ 2.95
FGFR3-210ENST00000613647 SHROOM4Q9ULL8 1493 aa33.23■■■□□ 2.91
FGFR3-210ENST00000613647 EHMT2Q96KQ7 1210 aa31.96■■■□□ 2.71
FGFR3-210ENST00000613647 FAM9AQ8IZU1 332 aaPredicted RBP31.45■■■□□ 2.62
FGFR3-210ENST00000613647 PCGF6Q9BYE7 350 aa31.14■■■□□ 2.57
FGFR3-210ENST00000613647 TRIM41Q8WV44 630 aa31■■■□□ 2.55
FGFR3-210ENST00000613647 APLP2Q06481 763 aa30.88■■■□□ 2.53
FGFR3-210ENST00000613647 TTBK1Q5TCY1 1321 aaPredicted RBP30.83■■■□□ 2.53
FGFR3-210ENST00000613647 RANGAP1P46060 587 aaPredicted RBP30.53■■■□□ 2.48
FGFR3-210ENST00000613647 CHIC1Q5VXU3 224 aa30.4■■■□□ 2.46
FGFR3-210ENST00000613647 UBTFP17480 764 aaKnown RBP30.37■■■□□ 2.45
FGFR3-210ENST00000613647 LOC105371045A0A1W2PR82 267 aa30.21■■■□□ 2.43
FGFR3-210ENST00000613647 CCER1Q8TC90 406 aaPredicted RBP30.2■■■□□ 2.42
FGFR3-210ENST00000613647 ZEB1P37275 1124 aaPredicted RBP30.14■■■□□ 2.42
FGFR3-210ENST00000613647 PPARGC1BQ86YN6 1023 aaKnown RBP30.14■■■□□ 2.42
FGFR3-210ENST00000613647 ATP1B4Q9UN42 357 aaPredicted RBP29.99■■■□□ 2.39
FGFR3-210ENST00000613647 TRIM26Q12899 539 aaPredicted RBP29.93■■■□□ 2.38
FGFR3-210ENST00000613647 ABCC9O60706 1549 aa29.87■■■□□ 2.37
FGFR3-210ENST00000613647 PELP1Q8IZL8 1130 aaKnown RBP29.73■■■□□ 2.35
FGFR3-210ENST00000613647 HRCP23327 699 aa29.73■■■□□ 2.35
FGFR3-210ENST00000613647 CENPBP07199 599 aaPredicted RBP29.59■■■□□ 2.33
FGFR3-210ENST00000613647 PABPN1Q86U42 306 aaKnown RBP eCLIP29.58■■■□□ 2.336e-7■■■□□ 14.8
FGFR3-210ENST00000613647 HNRNPUL2Q1KMD3 747 aaKnown RBP29.3■■■□□ 2.28
FGFR3-210ENST00000613647 ITGAEP38570 1179 aa29.3■■■□□ 2.28
FGFR3-210ENST00000613647 ZCCHC6Q5VYS8 1495 aaKnown RBP29.28■■■□□ 2.28
FGFR3-210ENST00000613647 YTHDC1Q96MU7 727 aaKnown RBP29.26■■■□□ 2.28
FGFR3-210ENST00000613647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.12■■■□□ 2.25
FGFR3-210ENST00000613647 SCRIBQ14160 1630 aa28.84■■■□□ 2.21
FGFR3-210ENST00000613647 CCDC180Q9P1Z9 1646 aa28.81■■■□□ 2.2
FGFR3-210ENST00000613647 NEFLP07196 543 aa28.73■■■□□ 2.19
FGFR3-210ENST00000613647 CSRNP3Q8WYN3 585 aa28.73■■■□□ 2.19
FGFR3-210ENST00000613647 DIEXFQ68CQ4 756 aaKnown RBP28.63■■■□□ 2.17
FGFR3-210ENST00000613647 FAM50AQ14320 339 aaKnown RBP28.6■■■□□ 2.17
FGFR3-210ENST00000613647 POLR3GLQ9BT43 218 aa28.51■■■□□ 2.15
FGFR3-210ENST00000613647 ERICH6Q7L0X2 663 aa28.46■■■□□ 2.15
FGFR3-210ENST00000613647 MYT1LQ9UL68 1186 aa28.44■■■□□ 2.14
FGFR3-210ENST00000613647 CNGB1Q14028 1251 aaPredicted RBP28.37■■■□□ 2.13
FGFR3-210ENST00000613647 P3H3Q8IVL6 736 aa28.33■■■□□ 2.13
FGFR3-210ENST00000613647 NEUROD1Q13562 356 aa28.32■■■□□ 2.12
FGFR3-210ENST00000613647 RSF1Q96T23 1441 aaPredicted RBP28.29■■■□□ 2.12
FGFR3-210ENST00000613647 DCAF1Q9Y4B6 1507 aa28.26■■■□□ 2.11
FGFR3-210ENST00000613647 TRIM52Q96A61 297 aa28.25■■■□□ 2.11
FGFR3-210ENST00000613647 MYO15BQ96JP2 1530 aa28.21■■■□□ 2.11
FGFR3-210ENST00000613647 FBLN2P98095 1184 aa28.16■■■□□ 2.1
FGFR3-210ENST00000613647 ZNF316A6NFI3 1004 aaPredicted RBP28.12■■■□□ 2.09
FGFR3-210ENST00000613647 ARID3CA6NKF2 412 aa28.06■■■□□ 2.08
FGFR3-210ENST00000613647 RB1CC1Q8TDY2 1594 aa27.99■■■□□ 2.07
FGFR3-210ENST00000613647 GTF3C3Q9Y5Q9 886 aa27.92■■■□□ 2.06
FGFR3-210ENST00000613647 NACADO15069 1562 aa27.92■■■□□ 2.06
FGFR3-210ENST00000613647 ZNF326Q5BKZ1 582 aaKnown RBP27.87■■■□□ 2.05
FGFR3-210ENST00000613647 CECR2Q9BXF3 1484 aa27.81■■■□□ 2.04
FGFR3-210ENST00000613647 ANP32CO43423 234 aa27.79■■■□□ 2.04
FGFR3-210ENST00000613647 SLC4A1APQ9BWU0 796 aaKnown RBP27.72■■■□□ 2.03
FGFR3-210ENST00000613647 CLIP1P30622 1438 aa27.71■■■□□ 2.03
FGFR3-210ENST00000613647 ZNF777Q9ULD5 760 aaPredicted RBP27.7■■■□□ 2.02
FGFR3-210ENST00000613647 ACIN1Q9UKV3 1341 aaKnown RBP27.68■■■□□ 2.02
FGFR3-210ENST00000613647 BCANQ96GW7 911 aa27.65■■■□□ 2.02
FGFR3-210ENST00000613647 WRNQ14191 1432 aaPredicted RBP eCLIP27.65■■■□□ 2.023e-7■■■□□ 16.4
FGFR3-210ENST00000613647 CDK11AQ9UQ88 783 aaPredicted RBP27.64■■■□□ 2.01
FGFR3-210ENST00000613647 CEP162Q5TB80 1403 aa27.63■■■□□ 2.01
FGFR3-210ENST00000613647 EEA1Q15075 1411 aa27.61■■■□□ 2.01
FGFR3-210ENST00000613647 MYT1Q01538 1121 aa27.58■■■□□ 2.01
FGFR3-210ENST00000613647 BAZ1AQ9NRL2 1556 aaPredicted RBP27.55■■■□□ 2
FGFR3-210ENST00000613647 BAZ1BQ9UIG0 1483 aaKnown RBP27.54■■■□□ 2
FGFR3-210ENST00000613647 GOLGA3Q08378 1498 aa27.52■■■□□ 2
FGFR3-210ENST00000613647 DAXXQ9UER7 740 aaPredicted RBP27.48■■□□□ 1.99
FGFR3-210ENST00000613647 CHIC2Q9UKJ5 165 aa27.48■■□□□ 1.99
FGFR3-210ENST00000613647 TONSLQ96HA7 1378 aa27.46■■□□□ 1.99
FGFR3-210ENST00000613647 TNIKQ9UKE5 1360 aa27.45■■□□□ 1.99
FGFR3-210ENST00000613647 DDX10Q13206 875 aaKnown RBP27.42■■□□□ 1.98
FGFR3-210ENST00000613647 MROH2BQ7Z745 1585 aa27.41■■□□□ 1.98
FGFR3-210ENST00000613647 MTUS2Q5JR59 1369 aa27.39■■□□□ 1.97
FGFR3-210ENST00000613647 SOGA1O94964 1423 aa27.31■■□□□ 1.96
FGFR3-210ENST00000613647 CEP164Q9UPV0 1460 aa27.3■■□□□ 1.96
FGFR3-210ENST00000613647 KIF27Q86VH2 1401 aa27.3■■□□□ 1.96
FGFR3-210ENST00000613647 CLSPNQ9HAW4 1339 aa27.24■■□□□ 1.95
FGFR3-210ENST00000613647 MIER1Q8N108 512 aa27.24■■□□□ 1.95
FGFR3-210ENST00000613647 CHMP7Q8WUX9 453 aaPredicted RBP27.23■■□□□ 1.95
FGFR3-210ENST00000613647 HIRIP3Q9BW71 556 aaPredicted RBP27.2■■□□□ 1.94
FGFR3-210ENST00000613647 CCDC88BA6NC98 1476 aa27.19■■□□□ 1.94
FGFR3-210ENST00000613647 RRP7BPQ9NSQ0 103 aa27.15■■□□□ 1.94
FGFR3-210ENST00000613647 TSPY4P0CV99 314 aa27.11■■□□□ 1.93
FGFR3-210ENST00000613647 TSPY10P0CW01 314 aa27.11■■□□□ 1.93
FGFR3-210ENST00000613647 HNRNPUQ00839 825 aaKnown RBP eCLIP27.11■■□□□ 1.933e-6■■■□□ 14.8
FGFR3-210ENST00000613647 ABCC8Q09428 1581 aa27.09■■□□□ 1.93
FGFR3-210ENST00000613647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.07■■□□□ 1.923e-10■□□□□ 11
FGFR3-210ENST00000613647 FKBP8Q14318 412 aa27.06■■□□□ 1.92
FGFR3-210ENST00000613647 FAM9BQ8IZU0 186 aa27.05■■□□□ 1.92
FGFR3-210ENST00000613647 SCAF1Q9H7N4 1312 aaKnown RBP27■■□□□ 1.91
FGFR3-210ENST00000613647 KDM2AQ9Y2K7 1162 aa26.98■■□□□ 1.91
FGFR3-210ENST00000613647 CHGAP10645 457 aaKnown RBP26.98■■□□□ 1.91
FGFR3-210ENST00000613647 RTL5Q5HYW3 569 aaPredicted RBP26.97■■□□□ 1.91
FGFR3-210ENST00000613647 WIZO95785 1651 aa26.96■■□□□ 1.91
FGFR3-210ENST00000613647 CARMIL1Q5VZK9 1371 aa26.94■■□□□ 1.9
FGFR3-210ENST00000613647 NPM1P06748 294 aaKnown RBP eCLIP26.93■■□□□ 1.9
FGFR3-210ENST00000613647 CUX2O14529 1486 aa26.93■■□□□ 1.9
FGFR3-210ENST00000613647 PLEKHD1A6NEE1 506 aa26.89■■□□□ 1.9
FGFR3-210ENST00000613647 EIF4G2P78344 907 aaKnown RBP eCLIP26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms