Protein–RNA interactions for Protein: Q8IWS0

PHF6, PHD finger protein 6, humanhuman

Known RBP eCLIP

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF6Q8IWS0 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC13.79□□□□□ -0.25e-8■■■■■ 986.9
PHF6Q8IWS0 SNORD3B-1-201ENST00000577988 758 ntBASIC14.97□□□□□ -0.014e-58■■■■■ 510.1
PHF6Q8IWS0 SNORD3B-1-203ENST00000631292 217 nt11.52□□□□□ -0.574e-58■■■■■ 510.1
PHF6Q8IWS0 SNORD3B-1-202ENST00000617128 218 nt11.18□□□□□ -0.624e-58■■■■■ 510.1
PHF6Q8IWS0 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC13.79□□□□□ -0.29e-9■■■■■ 152.9
PHF6Q8IWS0 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC11.97□□□□□ -0.492e-7■■■■■ 140.9
PHF6Q8IWS0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.2■■□□□ 1.152e-7■■■■■ 104.6
PHF6Q8IWS0 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.182e-7■■■■■ 104.6
PHF6Q8IWS0 RILPL1-201ENST00000340724 2389 ntTSL 513.64□□□□□ -0.232e-7■■■■■ 104.6
PHF6Q8IWS0 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.65□□□□□ -1.58e-12■■■■■ 95.5
PHF6Q8IWS0 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.826e-7■■■■■ 89.1
PHF6Q8IWS0 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.78□□□□□ -1.326e-7■■■■■ 89.1
PHF6Q8IWS0 TNKS-203ENST00000517770 574 ntTSL 46.18□□□□□ -1.426e-7■■■■■ 89.1
PHF6Q8IWS0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.121e-7■■■■■ 85.8
PHF6Q8IWS0 TSPEAR-AS2-203ENST00000465978 345 ntTSL 514.37□□□□□ -0.112e-11■■■■■ 76.5
PHF6Q8IWS0 TRIM65-202ENST00000540128 886 ntTSL 323.75■■□□□ 1.394e-7■■■■■ 73.7
PHF6Q8IWS0 TRIM65-203ENST00000540812 385 ntTSL 219.23■□□□□ 0.674e-7■■■■■ 73.7
PHF6Q8IWS0 TRIM65-204ENST00000543309 865 ntTSL 217.25■□□□□ 0.354e-7■■■■■ 73.7
PHF6Q8IWS0 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.194e-7■■■■■ 73.7
PHF6Q8IWS0 CEP72-203ENST00000512038 656 ntTSL 218.96■□□□□ 0.639e-8■■■■■ 72.9
PHF6Q8IWS0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.119e-8■■■■■ 72.9
PHF6Q8IWS0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.82e-8■■■■■ 67.1
PHF6Q8IWS0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.12■□□□□ 0.492e-8■■■■■ 67.1
PHF6Q8IWS0 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.78□□□□□ -0.22e-8■■■■■ 67.1
PHF6Q8IWS0 FZR1-207ENST00000591290 1331 ntTSL 522.57■■□□□ 1.29e-10■■■■■ 66.6
PHF6Q8IWS0 FZR1-208ENST00000592214 598 ntTSL 319.93■□□□□ 0.789e-10■■■■■ 66.6
PHF6Q8IWS0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.659e-10■■■■■ 66.6
PHF6Q8IWS0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.289e-10■■■■■ 66.6
PHF6Q8IWS0 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.86■□□□□ 0.139e-10■■■■■ 66.6
PHF6Q8IWS0 LRCH4-204ENST00000476881 1675 ntTSL 221.4■■□□□ 1.027e-10■■■■■ 66.3
PHF6Q8IWS0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.29■□□□□ 0.687e-10■■■■■ 66.3
PHF6Q8IWS0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.517e-10■■■■■ 66.3
PHF6Q8IWS0 CCDC57-214ENST00000582040 330 ntTSL 316.97■□□□□ 0.317e-10■■■■■ 66.3
PHF6Q8IWS0 LRCH4-202ENST00000467201 4754 ntTSL 214.74□□□□□ -0.057e-10■■■■■ 66.3
PHF6Q8IWS0 CCDC57-207ENST00000419322 2829 ntAPPRIS ALT2 TSL 514.41□□□□□ -0.17e-10■■■■■ 66.3
PHF6Q8IWS0 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.317e-10■■■■■ 66.3
PHF6Q8IWS0 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.317e-10■■■■■ 66.3
PHF6Q8IWS0 CCDC57-205ENST00000392346 2964 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.587e-10■■■■■ 66.3
PHF6Q8IWS0 MVD-212ENST00000565842 285 ntTSL 327.78■■■□□ 2.042e-6■■■■■ 64.8
PHF6Q8IWS0 MVD-216ENST00000568709 809 ntTSL 520.79■□□□□ 0.922e-6■■■■■ 64.8
PHF6Q8IWS0 MVD-206ENST00000563170 904 ntTSL 318.12■□□□□ 0.492e-6■■■■■ 64.8
PHF6Q8IWS0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.2■■□□□ 1.625e-8■■■■■ 63.5
PHF6Q8IWS0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.615e-8■■■■■ 63.5
PHF6Q8IWS0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.74■■□□□ 1.395e-8■■■■■ 63.5
PHF6Q8IWS0 TOM1-216ENST00000492723 2568 ntTSL 215.99■□□□□ 0.152e-6■■■■■ 62.5
PHF6Q8IWS0 ABCA13-201ENST00000411975 4480 ntTSL 211.47□□□□□ -0.574e-9■■■■■ 61.2
PHF6Q8IWS0 ABCA13-205ENST00000453246 4275 ntTSL 29.43□□□□□ -0.94e-9■■■■■ 61.2
PHF6Q8IWS0 ABCA13-207ENST00000544596 7870 ntAPPRIS ALT2 TSL 1 (best)7.79□□□□□ -1.164e-9■■■■■ 61.2
PHF6Q8IWS0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.644e-9■■■■■ 61.2
PHF6Q8IWS0 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.264e-10■■■■■ 60.5
PHF6Q8IWS0 SNORD63B-201ENST00000411005 70 ntBASIC1.77□□□□□ -2.132e-9■■■■■ 56.5
PHF6Q8IWS0 PKP3-210ENST00000533249 1111 ntTSL 327.03■■□□□ 1.922e-8■■■■■ 56.1
PHF6Q8IWS0 PKP3-206ENST00000528036 940 ntTSL 226.48■■□□□ 1.832e-8■■■■■ 56.1
PHF6Q8IWS0 PKP3-205ENST00000527442 847 ntTSL 325.06■■□□□ 1.62e-8■■■■■ 56.1
PHF6Q8IWS0 PLEKHA2-203ENST00000519640 565 ntTSL 523.53■■□□□ 1.362e-8■■■■■ 56.1
PHF6Q8IWS0 PKP3-211ENST00000534401 756 ntTSL 323.52■■□□□ 1.362e-8■■■■■ 56.1
PHF6Q8IWS0 PKP3-208ENST00000531857 687 ntTSL 420.9■□□□□ 0.942e-8■■■■■ 56.1
PHF6Q8IWS0 PKP3-207ENST00000530695 441 ntTSL 519.82■□□□□ 0.762e-8■■■■■ 56.1
PHF6Q8IWS0 NFIC-208ENST00000589537 977 ntTSL 218.84■□□□□ 0.612e-8■■■■■ 56.1
PHF6Q8IWS0 PKP3-209ENST00000533069 590 ntTSL 218.72■□□□□ 0.592e-8■■■■■ 56.1
PHF6Q8IWS0 MAEA-209ENST00000506530 5371 ntTSL 218.69■□□□□ 0.582e-8■■■■■ 56.1
PHF6Q8IWS0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.462e-8■■■■■ 56.1
PHF6Q8IWS0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.87■□□□□ 0.452e-8■■■■■ 56.1
PHF6Q8IWS0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.53■□□□□ 0.42e-8■■■■■ 56.1
PHF6Q8IWS0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.43■□□□□ 0.382e-8■■■■■ 56.1
PHF6Q8IWS0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.68■□□□□ 0.262e-8■■■■■ 56.1
PHF6Q8IWS0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.242e-8■■■■■ 56.1
PHF6Q8IWS0 MAEA-215ENST00000512289 2426 ntTSL 216.41■□□□□ 0.222e-8■■■■■ 56.1
PHF6Q8IWS0 NFIC-207ENST00000589164 435 ntTSL 314.23□□□□□ -0.132e-8■■■■■ 56.1
PHF6Q8IWS0 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC12.46□□□□□ -0.422e-8■■■■■ 56.1
PHF6Q8IWS0 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.552e-8■■■■■ 56.1
PHF6Q8IWS0 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC14.51□□□□□ -0.091e-6■■■■■ 55.4
PHF6Q8IWS0 AL669831.3-207ENST00000635509 941 ntTSL 511.64□□□□□ -0.551e-6■■■■■ 55.4
PHF6Q8IWS0 KLHDC4-202ENST00000316853 1287 ntTSL 1 (best)20.08■□□□□ 0.819e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.02■□□□□ 0.89e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-207ENST00000562155 1757 ntTSL 519.98■□□□□ 0.799e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.93■□□□□ 0.789e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.729e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.719e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-215ENST00000566349 1377 ntTSL 218.07■□□□□ 0.489e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-208ENST00000562261 1065 ntTSL 317.95■□□□□ 0.469e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-212ENST00000564396 563 ntTSL 517.15■□□□□ 0.349e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-217ENST00000566661 2232 ntTSL 516.61■□□□□ 0.259e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-214ENST00000565328 582 ntTSL 416.61■□□□□ 0.259e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-226ENST00000569747 560 ntTSL 415.92■□□□□ 0.149e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-218ENST00000567298 4572 ntTSL 514.01□□□□□ -0.179e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-213ENST00000564484 562 ntTSL 511.61□□□□□ -0.559e-7■■■■■ 55
PHF6Q8IWS0 KLHDC4-219ENST00000567513 585 ntTSL 48.22□□□□□ -1.099e-7■■■■■ 55
PHF6Q8IWS0 ASMTL-AS1-201ENST00000419737 553 ntTSL 213.88□□□□□ -0.195e-8■■■■■ 54.4
PHF6Q8IWS0 ASMTL-AS1-205ENST00000602357 435 ntTSL 2 BASIC13.56□□□□□ -0.245e-8■■■■■ 54.4
PHF6Q8IWS0 ADARB1-206ENST00000449478 704 ntTSL 517.63■□□□□ 0.412e-7■■■■■ 53.2
PHF6Q8IWS0 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC12.07□□□□□ -0.482e-7■■■■■ 53.2
PHF6Q8IWS0 ADARB1-209ENST00000464215 389 ntTSL 38.21□□□□□ -1.12e-7■■■■■ 53.2
PHF6Q8IWS0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.91■■□□□ 1.269e-8■■■■■ 52.8
PHF6Q8IWS0 TSC2-226ENST00000569930 2621 ntTSL 217.69■□□□□ 0.429e-9■■■■■ 52.5
PHF6Q8IWS0 TSC2-225ENST00000569110 1687 ntTSL 516.69■□□□□ 0.269e-9■■■■■ 52.5
PHF6Q8IWS0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.159e-9■■■■■ 52.5
PHF6Q8IWS0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.149e-9■■■■■ 52.5
PHF6Q8IWS0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.129e-9■■■■■ 52.5
PHF6Q8IWS0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.089e-9■■■■■ 52.5
Retrieved 100 of 4,170 protein–RNA pairs in 30.1 ms