RNA–Protein interactions for RNA: ENST00000481110.6

FGFR3-208, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 1 (best) BASIC

Gene FGFR3, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-208ENST00000481110 NISCHQ9Y2I1 1504 aa30.7■■■□□ 2.5
FGFR3-208ENST00000481110 DCAF8L2P0C7V8 631 aa29.69■■■□□ 2.34
FGFR3-208ENST00000481110 SHROOM4Q9ULL8 1493 aa28.63■■■□□ 2.17
FGFR3-208ENST00000481110 SUPT5HO00267 1087 aaKnown RBP28.61■■■□□ 2.17
FGFR3-208ENST00000481110 EHMT2Q96KQ7 1210 aa27.4■■□□□ 1.98
FGFR3-208ENST00000481110 FAM9AQ8IZU1 332 aaPredicted RBP26.84■■□□□ 1.89
FGFR3-208ENST00000481110 PCGF6Q9BYE7 350 aa26.5■■□□□ 1.83
FGFR3-208ENST00000481110 TRIM41Q8WV44 630 aa26.37■■□□□ 1.81
FGFR3-208ENST00000481110 TTBK1Q5TCY1 1321 aaPredicted RBP26.31■■□□□ 1.8
FGFR3-208ENST00000481110 CHIC1Q5VXU3 224 aa26.18■■□□□ 1.78
FGFR3-208ENST00000481110 LOC105371045A0A1W2PR82 267 aa26.05■■□□□ 1.76
FGFR3-208ENST00000481110 RANGAP1P46060 587 aaPredicted RBP26■■□□□ 1.75
FGFR3-208ENST00000481110 ABCC9O60706 1549 aa25.93■■□□□ 1.74
FGFR3-208ENST00000481110 PPARGC1BQ86YN6 1023 aaKnown RBP25.88■■□□□ 1.73
FGFR3-208ENST00000481110 APLP2Q06481 763 aa25.8■■□□□ 1.72
FGFR3-208ENST00000481110 UBTFP17480 764 aaKnown RBP25.74■■□□□ 1.71
FGFR3-208ENST00000481110 HRCP23327 699 aa25.71■■□□□ 1.71
FGFR3-208ENST00000481110 PABPN1Q86U42 306 aaKnown RBP eCLIP25.59■■□□□ 1.696e-7■■■□□ 14.8
FGFR3-208ENST00000481110 ZCCHC6Q5VYS8 1495 aaKnown RBP25.55■■□□□ 1.68
FGFR3-208ENST00000481110 CCER1Q8TC90 406 aaPredicted RBP25.47■■□□□ 1.67
FGFR3-208ENST00000481110 TRIM26Q12899 539 aaPredicted RBP25.4■■□□□ 1.66
FGFR3-208ENST00000481110 ATP1B4Q9UN42 357 aaPredicted RBP25.33■■□□□ 1.65
FGFR3-208ENST00000481110 ZEB1P37275 1124 aaPredicted RBP25.21■■□□□ 1.63
FGFR3-208ENST00000481110 CCDC180Q9P1Z9 1646 aa25.14■■□□□ 1.62
FGFR3-208ENST00000481110 PELP1Q8IZL8 1130 aaKnown RBP25.11■■□□□ 1.61
FGFR3-208ENST00000481110 SCRIBQ14160 1630 aa25.1■■□□□ 1.61
FGFR3-208ENST00000481110 HNRNPUL2Q1KMD3 747 aaKnown RBP24.93■■□□□ 1.58
FGFR3-208ENST00000481110 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.89■■□□□ 1.58
FGFR3-208ENST00000481110 ITGAEP38570 1179 aa24.88■■□□□ 1.57
FGFR3-208ENST00000481110 CENPBP07199 599 aaPredicted RBP24.81■■□□□ 1.56
FGFR3-208ENST00000481110 YTHDC1Q96MU7 727 aaKnown RBP24.77■■□□□ 1.56
FGFR3-208ENST00000481110 MYO15BQ96JP2 1530 aa24.72■■□□□ 1.55
FGFR3-208ENST00000481110 RSF1Q96T23 1441 aaPredicted RBP24.61■■□□□ 1.53
FGFR3-208ENST00000481110 CSRNP3Q8WYN3 585 aa24.57■■□□□ 1.52
FGFR3-208ENST00000481110 CECR2Q9BXF3 1484 aa24.35■■□□□ 1.49
FGFR3-208ENST00000481110 DCAF1Q9Y4B6 1507 aa24.28■■□□□ 1.48
FGFR3-208ENST00000481110 P3H3Q8IVL6 736 aa24.27■■□□□ 1.48
FGFR3-208ENST00000481110 FAM50AQ14320 339 aaKnown RBP24.25■■□□□ 1.47
FGFR3-208ENST00000481110 GTF3C3Q9Y5Q9 886 aa24.24■■□□□ 1.47
FGFR3-208ENST00000481110 DIEXFQ68CQ4 756 aaKnown RBP24.23■■□□□ 1.47
FGFR3-208ENST00000481110 MYT1Q01538 1121 aa24.22■■□□□ 1.47
FGFR3-208ENST00000481110 RB1CC1Q8TDY2 1594 aa24.21■■□□□ 1.47
FGFR3-208ENST00000481110 NACADO15069 1562 aa24.2■■□□□ 1.46
FGFR3-208ENST00000481110 CNGB1Q14028 1251 aaPredicted RBP24.17■■□□□ 1.46
FGFR3-208ENST00000481110 SCAF1Q9H7N4 1312 aaKnown RBP24.12■■□□□ 1.45
FGFR3-208ENST00000481110 ARID3CA6NKF2 412 aa24.04■■□□□ 1.44
FGFR3-208ENST00000481110 NEUROD1Q13562 356 aa24.04■■□□□ 1.44
FGFR3-208ENST00000481110 ACIN1Q9UKV3 1341 aaKnown RBP23.99■■□□□ 1.43
FGFR3-208ENST00000481110 POLR3GLQ9BT43 218 aa23.98■■□□□ 1.43
FGFR3-208ENST00000481110 MROH2BQ7Z745 1585 aa23.98■■□□□ 1.43
FGFR3-208ENST00000481110 FBLN2P98095 1184 aa23.96■■□□□ 1.43
FGFR3-208ENST00000481110 TRIM52Q96A61 297 aa23.85■■□□□ 1.41
FGFR3-208ENST00000481110 BAZ1AQ9NRL2 1556 aaPredicted RBP23.84■■□□□ 1.41
FGFR3-208ENST00000481110 MYT1LQ9UL68 1186 aa23.83■■□□□ 1.4
FGFR3-208ENST00000481110 ZNF316A6NFI3 1004 aaPredicted RBP23.82■■□□□ 1.4
FGFR3-208ENST00000481110 WRNQ14191 1432 aaPredicted RBP eCLIP23.81■■□□□ 1.43e-7■■■□□ 16.4
FGFR3-208ENST00000481110 NEFLP07196 543 aa23.8■■□□□ 1.4
FGFR3-208ENST00000481110 CEP162Q5TB80 1403 aa23.77■■□□□ 1.4
FGFR3-208ENST00000481110 BAZ1BQ9UIG0 1483 aaKnown RBP23.75■■□□□ 1.39
FGFR3-208ENST00000481110 CLIP1P30622 1438 aa23.74■■□□□ 1.39
FGFR3-208ENST00000481110 SOGA1O94964 1423 aa23.73■■□□□ 1.39
FGFR3-208ENST00000481110 ERICH6Q7L0X2 663 aa23.72■■□□□ 1.39
FGFR3-208ENST00000481110 CCDC88BA6NC98 1476 aa23.66■■□□□ 1.38
FGFR3-208ENST00000481110 ABCC8Q09428 1581 aa23.63■■□□□ 1.37
FGFR3-208ENST00000481110 WIZO95785 1651 aa23.63■■□□□ 1.37
FGFR3-208ENST00000481110 GOLGA3Q08378 1498 aa23.59■■□□□ 1.37
FGFR3-208ENST00000481110 TNIKQ9UKE5 1360 aa23.57■■□□□ 1.36
FGFR3-208ENST00000481110 ZNF326Q5BKZ1 582 aaKnown RBP23.57■■□□□ 1.36
FGFR3-208ENST00000481110 EEA1Q15075 1411 aa23.56■■□□□ 1.36
FGFR3-208ENST00000481110 BCANQ96GW7 911 aa23.53■■□□□ 1.36
FGFR3-208ENST00000481110 ZNF777Q9ULD5 760 aaPredicted RBP23.52■■□□□ 1.36
FGFR3-208ENST00000481110 CHIC2Q9UKJ5 165 aa23.47■■□□□ 1.35
FGFR3-208ENST00000481110 CEP164Q9UPV0 1460 aa23.4■■□□□ 1.34
FGFR3-208ENST00000481110 KIF27Q86VH2 1401 aa23.38■■□□□ 1.33
FGFR3-208ENST00000481110 HIRIP3Q9BW71 556 aaPredicted RBP23.34■■□□□ 1.33
FGFR3-208ENST00000481110 ANP32CO43423 234 aa23.34■■□□□ 1.33
FGFR3-208ENST00000481110 DDX10Q13206 875 aaKnown RBP23.32■■□□□ 1.32
FGFR3-208ENST00000481110 MIER1Q8N108 512 aa23.3■■□□□ 1.32
FGFR3-208ENST00000481110 MTUS2Q5JR59 1369 aa23.29■■□□□ 1.32
FGFR3-208ENST00000481110 TOP2AP11388 1531 aaKnown RBP23.27■■□□□ 1.32
FGFR3-208ENST00000481110 RUSC2Q8N2Y8 1516 aa23.27■■□□□ 1.32
FGFR3-208ENST00000481110 CDK11AQ9UQ88 783 aaPredicted RBP23.27■■□□□ 1.32
FGFR3-208ENST00000481110 TONSLQ96HA7 1378 aa23.21■■□□□ 1.31
FGFR3-208ENST00000481110 KANK4Q5T7N3 995 aaPredicted RBP23.21■■□□□ 1.31
FGFR3-208ENST00000481110 RRP7BPQ9NSQ0 103 aa23.21■■□□□ 1.31
FGFR3-208ENST00000481110 SLC4A1APQ9BWU0 796 aaKnown RBP23.2■■□□□ 1.3
FGFR3-208ENST00000481110 CHMP7Q8WUX9 453 aaPredicted RBP23.19■■□□□ 1.3
FGFR3-208ENST00000481110 CUX2O14529 1486 aa23.19■■□□□ 1.3
FGFR3-208ENST00000481110 ATAD2BQ9ULI0 1458 aa23.17■■□□□ 1.3
FGFR3-208ENST00000481110 SMARCA4P51532 1647 aa23.17■■□□□ 1.3
FGFR3-208ENST00000481110 CARMIL1Q5VZK9 1371 aa23.14■■□□□ 1.3
FGFR3-208ENST00000481110 SMARCA2P51531 1590 aa23.11■■□□□ 1.29
FGFR3-208ENST00000481110 SIN3AQ96ST3 1273 aa23.08■■□□□ 1.29
FGFR3-208ENST00000481110 VPS8Q8N3P4 1428 aa23.06■■□□□ 1.28
FGFR3-208ENST00000481110 RAPGEF2Q9Y4G8 1499 aa23.02■■□□□ 1.27
FGFR3-208ENST00000481110 TDRD9Q8NDG6 1382 aaKnown RBP22.99■■□□□ 1.27
FGFR3-208ENST00000481110 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.99■■□□□ 1.273e-10■□□□□ 11
FGFR3-208ENST00000481110 CCNB3Q8WWL7 1395 aa22.96■■□□□ 1.27
FGFR3-208ENST00000481110 KDM2AQ9Y2K7 1162 aa22.93■■□□□ 1.26
FGFR3-208ENST00000481110 CADPSQ9ULU8 1353 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms