RNA–Protein interactions for RNA: ENST00000589575.5

PTBP1-214, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-214ENST00000589575 NISCHQ9Y2I1 1504 aa31.96■■■□□ 2.71
PTBP1-214ENST00000589575 CCDC180Q9P1Z9 1646 aa28.44■■■□□ 2.14
PTBP1-214ENST00000589575 ABCC9O60706 1549 aa28.28■■■□□ 2.12
PTBP1-214ENST00000589575 DCAF8L2P0C7V8 631 aa27.06■■□□□ 1.92
PTBP1-214ENST00000589575 RB1CC1Q8TDY2 1594 aa27■■□□□ 1.91
PTBP1-214ENST00000589575 NACADO15069 1562 aa26.88■■□□□ 1.89
PTBP1-214ENST00000589575 MYO15BQ96JP2 1530 aa26.58■■□□□ 1.85
PTBP1-214ENST00000589575 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
PTBP1-214ENST00000589575 PABPN1Q86U42 306 aaKnown RBP eCLIP26.44■■□□□ 1.82
PTBP1-214ENST00000589575 DCAF1Q9Y4B6 1507 aa26.38■■□□□ 1.81
PTBP1-214ENST00000589575 UNC13AQ9UPW8 1703 aa26.22■■□□□ 1.79
PTBP1-214ENST00000589575 DNAJC5BQ9UF47 199 aa26.19■■□□□ 1.78
PTBP1-214ENST00000589575 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
PTBP1-214ENST00000589575 SCRIBQ14160 1630 aa26.05■■□□□ 1.76
PTBP1-214ENST00000589575 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
PTBP1-214ENST00000589575 EIF4G1Q04637 1599 aaKnown RBP25.52■■□□□ 1.68
PTBP1-214ENST00000589575 CC2D2AQ9P2K1 1620 aa25.48■■□□□ 1.67
PTBP1-214ENST00000589575 CECR2Q9BXF3 1484 aa25.42■■□□□ 1.66
PTBP1-214ENST00000589575 NCAPD3P42695 1498 aa24.83■■□□□ 1.56
PTBP1-214ENST00000589575 SMARCA4P51532 1647 aa24.83■■□□□ 1.56
PTBP1-214ENST00000589575 ATAD2BQ9ULI0 1458 aa24.82■■□□□ 1.56
PTBP1-214ENST00000589575 BAZ1AQ9NRL2 1556 aaPredicted RBP24.8■■□□□ 1.56
PTBP1-214ENST00000589575 SMARCA2P51531 1590 aa24.76■■□□□ 1.55
PTBP1-214ENST00000589575 HMGXB3Q12766 1538 aa24.65■■□□□ 1.54
PTBP1-214ENST00000589575 MROH2BQ7Z745 1585 aa24.64■■□□□ 1.54
PTBP1-214ENST00000589575 BAZ1BQ9UIG0 1483 aaKnown RBP24.64■■□□□ 1.53
PTBP1-214ENST00000589575 PEG3Q9GZU2 1588 aa24.55■■□□□ 1.52
PTBP1-214ENST00000589575 ERCC6Q03468 1493 aa24.44■■□□□ 1.5
PTBP1-214ENST00000589575 NESP48681 1621 aa24.35■■□□□ 1.49
PTBP1-214ENST00000589575 WIZO95785 1651 aa24.33■■□□□ 1.49
PTBP1-214ENST00000589575 RSF1Q96T23 1441 aaPredicted RBP24.28■■□□□ 1.48
PTBP1-214ENST00000589575 LAMC3Q9Y6N6 1575 aa24.2■■□□□ 1.46
PTBP1-214ENST00000589575 CUX2O14529 1486 aa24.19■■□□□ 1.46
PTBP1-214ENST00000589575 CADPSQ9ULU8 1353 aa24.14■■□□□ 1.45
PTBP1-214ENST00000589575 PDS5BQ9NTI5 1447 aa24.13■■□□□ 1.45
PTBP1-214ENST00000589575 TOP2AP11388 1531 aaKnown RBP24.07■■□□□ 1.44
PTBP1-214ENST00000589575 KIF21AQ7Z4S6 1674 aa23.95■■□□□ 1.43
PTBP1-214ENST00000589575 THOC2Q8NI27 1593 aaKnown RBP23.95■■□□□ 1.43
PTBP1-214ENST00000589575 CFTRP13569 1480 aa23.9■■□□□ 1.42
PTBP1-214ENST00000589575 MRC2Q9UBG0 1479 aa23.87■■□□□ 1.41
PTBP1-214ENST00000589575 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
PTBP1-214ENST00000589575 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
PTBP1-214ENST00000589575 CCDC88BA6NC98 1476 aa23.82■■□□□ 1.4
PTBP1-214ENST00000589575 DNAJC5Q9H3Z4 198 aa23.82■■□□□ 1.4
PTBP1-214ENST00000589575 WDR62O43379 1518 aa23.74■■□□□ 1.39
PTBP1-214ENST00000589575 SUPT5HO00267 1087 aaKnown RBP23.62■■□□□ 1.37
PTBP1-214ENST00000589575 URB2Q14146 1524 aaKnown RBP23.6■■□□□ 1.37
PTBP1-214ENST00000589575 PRDM2Q13029 1718 aa23.53■■□□□ 1.36
PTBP1-214ENST00000589575 TOPBP1Q92547 1522 aa23.43■■□□□ 1.34
PTBP1-214ENST00000589575 ABCC8Q09428 1581 aa23.41■■□□□ 1.34
PTBP1-214ENST00000589575 IFT140Q96RY7 1462 aa23.36■■□□□ 1.33
PTBP1-214ENST00000589575 DNMBPQ6XZF7 1577 aa23.35■■□□□ 1.33
PTBP1-214ENST00000589575 ZNF608Q9ULD9 1512 aaPredicted RBP23.28■■□□□ 1.32
PTBP1-214ENST00000589575 OSCARQ8IYS5 282 aa23.23■■□□□ 1.31
PTBP1-214ENST00000589575 POLA1P09884 1462 aaPredicted RBP23.21■■□□□ 1.31
PTBP1-214ENST00000589575 SOGA1O94964 1423 aa23.16■■□□□ 1.3
PTBP1-214ENST00000589575 AQRO60306 1485 aaKnown RBP eCLIP23.14■■□□□ 1.297e-8■■■■■ 33.4
PTBP1-214ENST00000589575 RAD54L2Q9Y4B4 1467 aa23.14■■□□□ 1.29
PTBP1-214ENST00000589575 CUX1P39880 1505 aa23.13■■□□□ 1.29
PTBP1-214ENST00000589575 FGD5Q6ZNL6 1462 aa23.12■■□□□ 1.29
PTBP1-214ENST00000589575 EIF4G3O43432 1585 aaKnown RBP23.12■■□□□ 1.29
PTBP1-214ENST00000589575 TARBP1Q13395 1621 aaKnown RBP23.11■■□□□ 1.29
PTBP1-214ENST00000589575 TDRD9Q8NDG6 1382 aaKnown RBP23.09■■□□□ 1.29
PTBP1-214ENST00000589575 FBLN2P98095 1184 aa23.04■■□□□ 1.28
PTBP1-214ENST00000589575 TRIM41Q8WV44 630 aa23.04■■□□□ 1.28
PTBP1-214ENST00000589575 WRNQ14191 1432 aaPredicted RBP eCLIP22.93■■□□□ 1.263e-6■■■■□ 22.3
PTBP1-214ENST00000589575 SNAPC4Q5SXM2 1469 aa22.92■■□□□ 1.26
PTBP1-214ENST00000589575 WDR97A6NE52 1622 aa22.91■■□□□ 1.26
PTBP1-214ENST00000589575 CHMP7Q8WUX9 453 aaPredicted RBP22.9■■□□□ 1.26
PTBP1-214ENST00000589575 GRIN2BQ13224 1484 aa22.9■■□□□ 1.26
PTBP1-214ENST00000589575 GAPVD1Q14C86 1478 aa22.86■■□□□ 1.25
PTBP1-214ENST00000589575 ABCA10Q8WWZ4 1543 aa22.86■■□□□ 1.25
PTBP1-214ENST00000589575 CHD1O14646 1710 aa22.84■■□□□ 1.25
PTBP1-214ENST00000589575 MAGI1Q96QZ7 1491 aaPredicted RBP22.84■■□□□ 1.25
PTBP1-214ENST00000589575 TOP2BQ02880 1626 aa22.82■■□□□ 1.24
PTBP1-214ENST00000589575 SYNJ1O43426 1573 aa22.81■■□□□ 1.24
PTBP1-214ENST00000589575 BIVM-ERCC5R4GMW8 1640 aa22.79■■□□□ 1.24
PTBP1-214ENST00000589575 SYNJ2O15056 1496 aa22.77■■□□□ 1.24
PTBP1-214ENST00000589575 ARHGEF11O15085 1522 aa22.77■■□□□ 1.24
PTBP1-214ENST00000589575 RIMBP3CA6NJZ7 1639 aa22.76■■□□□ 1.23
PTBP1-214ENST00000589575 RIMBP3BA6NNM3 1639 aa22.76■■□□□ 1.23
PTBP1-214ENST00000589575 RIMBP3Q9UFD9 1639 aa22.76■■□□□ 1.23
PTBP1-214ENST00000589575 ABCA5Q8WWZ7 1642 aa22.74■■□□□ 1.23
PTBP1-214ENST00000589575 PBRM1Q86U86 1689 aa22.72■■□□□ 1.23
PTBP1-214ENST00000589575 CYB5RLQ6IPT4 315 aa22.7■■□□□ 1.22
PTBP1-214ENST00000589575 CLASP1Q7Z460 1538 aa22.62■■□□□ 1.21
PTBP1-214ENST00000589575 FHAD1B1AJZ9 1412 aa22.59■■□□□ 1.21
PTBP1-214ENST00000589575 GRIN2AQ12879 1464 aa22.59■■□□□ 1.21
PTBP1-214ENST00000589575 ERICH3Q5RHP9 1530 aa22.57■■□□□ 1.2
PTBP1-214ENST00000589575 ARAP1Q96P48 1450 aa22.57■■□□□ 1.2
PTBP1-214ENST00000589575 ADAMTS12P58397 1594 aa22.57■■□□□ 1.2
PTBP1-214ENST00000589575 KIF27Q86VH2 1401 aa22.49■■□□□ 1.19
PTBP1-214ENST00000589575 NUP160Q12769 1436 aa22.48■■□□□ 1.19
PTBP1-214ENST00000589575 CEP170Q5SW79 1584 aa22.45■■□□□ 1.18
PTBP1-214ENST00000589575 IGF1RP08069 1367 aa22.41■■□□□ 1.18
PTBP1-214ENST00000589575 TRHP20396 242 aaPredicted RBP22.39■■□□□ 1.17
PTBP1-214ENST00000589575 JPH4Q96JJ6 628 aa22.34■■□□□ 1.17
PTBP1-214ENST00000589575 ERCC6L2Q5T890 1561 aa22.31■■□□□ 1.16
PTBP1-214ENST00000589575 CARMIL1Q5VZK9 1371 aa22.3■■□□□ 1.16
PTBP1-214ENST00000589575 PRG4Q92954 1404 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms