RNA–Protein interactions for RNA: ENST00000412135.6

FGFR3-204, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 5 BASIC

Gene FGFR3, Length 3,951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-204ENST00000412135 NISCHQ9Y2I1 1504 aa29.39■■■□□ 2.29
FGFR3-204ENST00000412135 SUPT5HO00267 1087 aaKnown RBP28.33■■■□□ 2.13
FGFR3-204ENST00000412135 SHROOM4Q9ULL8 1493 aa28.26■■■□□ 2.11
FGFR3-204ENST00000412135 DCAF8L2P0C7V8 631 aa27.96■■■□□ 2.07
FGFR3-204ENST00000412135 PCGF6Q9BYE7 350 aa27.52■■■□□ 2
FGFR3-204ENST00000412135 EHMT2Q96KQ7 1210 aa27.24■■□□□ 1.95
FGFR3-204ENST00000412135 PPARGC1BQ86YN6 1023 aaKnown RBP27.17■■□□□ 1.94
FGFR3-204ENST00000412135 HRCP23327 699 aa26.9■■□□□ 1.9
FGFR3-204ENST00000412135 LOC105371045A0A1W2PR82 267 aa26.6■■□□□ 1.85
FGFR3-204ENST00000412135 FAM9AQ8IZU1 332 aaPredicted RBP26.6■■□□□ 1.85
FGFR3-204ENST00000412135 CHIC1Q5VXU3 224 aa26.46■■□□□ 1.83
FGFR3-204ENST00000412135 TTBK1Q5TCY1 1321 aaPredicted RBP26.36■■□□□ 1.81
FGFR3-204ENST00000412135 TRIM26Q12899 539 aaPredicted RBP25.91■■□□□ 1.74
FGFR3-204ENST00000412135 MYO15BQ96JP2 1530 aa25.88■■□□□ 1.73
FGFR3-204ENST00000412135 TRIM41Q8WV44 630 aa25.76■■□□□ 1.71
FGFR3-204ENST00000412135 YTHDC1Q96MU7 727 aaKnown RBP25.74■■□□□ 1.71
FGFR3-204ENST00000412135 CCER1Q8TC90 406 aaPredicted RBP25.73■■□□□ 1.71
FGFR3-204ENST00000412135 PELP1Q8IZL8 1130 aaKnown RBP25.63■■□□□ 1.69
FGFR3-204ENST00000412135 ZEB1P37275 1124 aaPredicted RBP25.58■■□□□ 1.69
FGFR3-204ENST00000412135 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.58■■□□□ 1.69
FGFR3-204ENST00000412135 SCAF1Q9H7N4 1312 aaKnown RBP25.47■■□□□ 1.67
FGFR3-204ENST00000412135 CENPBP07199 599 aaPredicted RBP25.36■■□□□ 1.65
FGFR3-204ENST00000412135 RANGAP1P46060 587 aaPredicted RBP25.36■■□□□ 1.65
FGFR3-204ENST00000412135 GTF3C3Q9Y5Q9 886 aa25.29■■□□□ 1.64
FGFR3-204ENST00000412135 DIEXFQ68CQ4 756 aaKnown RBP25.13■■□□□ 1.61
FGFR3-204ENST00000412135 NEUROD1Q13562 356 aa25.11■■□□□ 1.61
FGFR3-204ENST00000412135 ACIN1Q9UKV3 1341 aaKnown RBP25.01■■□□□ 1.59
FGFR3-204ENST00000412135 UBTFP17480 764 aaKnown RBP24.95■■□□□ 1.58
FGFR3-204ENST00000412135 HNRNPUL2Q1KMD3 747 aaKnown RBP24.92■■□□□ 1.58
FGFR3-204ENST00000412135 DCAF1Q9Y4B6 1507 aa24.9■■□□□ 1.58
FGFR3-204ENST00000412135 APLP2Q06481 763 aa24.72■■□□□ 1.55
FGFR3-204ENST00000412135 ZCCHC6Q5VYS8 1495 aaKnown RBP24.66■■□□□ 1.54
FGFR3-204ENST00000412135 ITGAEP38570 1179 aa24.5■■□□□ 1.51
FGFR3-204ENST00000412135 BCANQ96GW7 911 aa24.5■■□□□ 1.51
FGFR3-204ENST00000412135 MYT1Q01538 1121 aa24.48■■□□□ 1.51
FGFR3-204ENST00000412135 ZNF316A6NFI3 1004 aaPredicted RBP24.42■■□□□ 1.5
FGFR3-204ENST00000412135 MIER1Q8N108 512 aa24.38■■□□□ 1.49
FGFR3-204ENST00000412135 CCDC180Q9P1Z9 1646 aa24.31■■□□□ 1.48
FGFR3-204ENST00000412135 ATP1B4Q9UN42 357 aaPredicted RBP24.21■■□□□ 1.47
FGFR3-204ENST00000412135 ERICH6Q7L0X2 663 aa24.02■■□□□ 1.44
FGFR3-204ENST00000412135 CNGB1Q14028 1251 aaPredicted RBP24.01■■□□□ 1.43
FGFR3-204ENST00000412135 NEFLP07196 543 aa24■■□□□ 1.43
FGFR3-204ENST00000412135 SCRIBQ14160 1630 aa23.99■■□□□ 1.43
FGFR3-204ENST00000412135 RSF1Q96T23 1441 aaPredicted RBP23.97■■□□□ 1.43
FGFR3-204ENST00000412135 CSRNP3Q8WYN3 585 aa23.86■■□□□ 1.41
FGFR3-204ENST00000412135 ABCC9O60706 1549 aa23.83■■□□□ 1.4
FGFR3-204ENST00000412135 HIRIP3Q9BW71 556 aaPredicted RBP23.81■■□□□ 1.4
FGFR3-204ENST00000412135 FKBP8Q14318 412 aa23.78■■□□□ 1.4
FGFR3-204ENST00000412135 PABPN1Q86U42 306 aaKnown RBP eCLIP23.78■■□□□ 1.46e-7■■■□□ 14.8
FGFR3-204ENST00000412135 RB1CC1Q8TDY2 1594 aa23.72■■□□□ 1.39
FGFR3-204ENST00000412135 TRIM52Q96A61 297 aa23.69■■□□□ 1.38
FGFR3-204ENST00000412135 DDX10Q13206 875 aaKnown RBP23.66■■□□□ 1.38
FGFR3-204ENST00000412135 SUPT16HQ9Y5B9 1047 aaKnown RBP23.65■■□□□ 1.38
FGFR3-204ENST00000412135 CEP162Q5TB80 1403 aa23.64■■□□□ 1.37
FGFR3-204ENST00000412135 IRX6P78412 446 aaPredicted RBP23.61■■□□□ 1.37
FGFR3-204ENST00000412135 FAM50AQ14320 339 aaKnown RBP23.6■■□□□ 1.37
FGFR3-204ENST00000412135 CECR2Q9BXF3 1484 aa23.59■■□□□ 1.37
FGFR3-204ENST00000412135 POLR3GLQ9BT43 218 aa23.54■■□□□ 1.36
FGFR3-204ENST00000412135 KCNH8Q96L42 1107 aa23.54■■□□□ 1.36
FGFR3-204ENST00000412135 SOGA1O94964 1423 aa23.49■■□□□ 1.35
FGFR3-204ENST00000412135 P3H3Q8IVL6 736 aa23.45■■□□□ 1.34
FGFR3-204ENST00000412135 ANP32EQ9BTT0 268 aa23.44■■□□□ 1.34
FGFR3-204ENST00000412135 SENP3-EIF4A1A0A087X0R7 540 aa23.42■■□□□ 1.34
FGFR3-204ENST00000412135 TSHZ2Q9NRE2 1034 aa23.41■■□□□ 1.34
FGFR3-204ENST00000412135 BCL11AQ9H165 835 aa23.37■■□□□ 1.33
FGFR3-204ENST00000412135 ABCC8Q09428 1581 aa23.35■■□□□ 1.33
FGFR3-204ENST00000412135 ANP32CO43423 234 aa23.33■■□□□ 1.33
FGFR3-204ENST00000412135 CCDC88BA6NC98 1476 aa23.33■■□□□ 1.32
FGFR3-204ENST00000412135 CLIP1P30622 1438 aa23.26■■□□□ 1.31
FGFR3-204ENST00000412135 SIN3AQ96ST3 1273 aa23.25■■□□□ 1.31
FGFR3-204ENST00000412135 MROH2BQ7Z745 1585 aa23.24■■□□□ 1.31
FGFR3-204ENST00000412135 HNRNPUQ00839 825 aaKnown RBP eCLIP23.24■■□□□ 1.313e-6■■■□□ 14.8
FGFR3-204ENST00000412135 RUSC2Q8N2Y8 1516 aa23.22■■□□□ 1.31
FGFR3-204ENST00000412135 CDK11AQ9UQ88 783 aaPredicted RBP23.22■■□□□ 1.31
FGFR3-204ENST00000412135 NBR1Q14596 966 aa23.21■■□□□ 1.31
FGFR3-204ENST00000412135 TNIKQ9UKE5 1360 aa23.2■■□□□ 1.3
FGFR3-204ENST00000412135 KANK4Q5T7N3 995 aaPredicted RBP23.14■■□□□ 1.29
FGFR3-204ENST00000412135 RBM19Q9Y4C8 960 aaKnown RBP23.12■■□□□ 1.29
FGFR3-204ENST00000412135 ARID3CA6NKF2 412 aa23.11■■□□□ 1.29
FGFR3-204ENST00000412135 FAM9BQ8IZU0 186 aa23.09■■□□□ 1.29
FGFR3-204ENST00000412135 WIZO95785 1651 aa23.06■■□□□ 1.28
FGFR3-204ENST00000412135 GOLGA3Q08378 1498 aa23.03■■□□□ 1.28
FGFR3-204ENST00000412135 ZNF326Q5BKZ1 582 aaKnown RBP23.01■■□□□ 1.27
FGFR3-204ENST00000412135 NPM2Q86SE8 214 aaKnown RBP23■■□□□ 1.27
FGFR3-204ENST00000412135 CLSPNQ9HAW4 1339 aa22.99■■□□□ 1.27
FGFR3-204ENST00000412135 RTL5Q5HYW3 569 aaPredicted RBP22.94■■□□□ 1.26
FGFR3-204ENST00000412135 SALL2Q9Y467 1007 aaPredicted RBP22.92■■□□□ 1.26
FGFR3-204ENST00000412135 WRNQ14191 1432 aaPredicted RBP eCLIP22.9■■□□□ 1.263e-7■■■□□ 16.4
FGFR3-204ENST00000412135 CHIC2Q9UKJ5 165 aa22.88■■□□□ 1.25
FGFR3-204ENST00000412135 B4GALNT3Q6L9W6 998 aa22.87■■□□□ 1.25
FGFR3-204ENST00000412135 RTN4Q9NQC3 1192 aaKnown RBP22.84■■□□□ 1.25
FGFR3-204ENST00000412135 TONSLQ96HA7 1378 aa22.82■■□□□ 1.24
FGFR3-204ENST00000412135 DHX57Q6P158 1386 aaKnown RBP22.81■■□□□ 1.24
FGFR3-204ENST00000412135 VPS8Q8N3P4 1428 aa22.75■■□□□ 1.23
FGFR3-204ENST00000412135 MRS2Q9HD23 443 aa22.74■■□□□ 1.23
FGFR3-204ENST00000412135 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
FGFR3-204ENST00000412135 EEA1Q15075 1411 aa22.7■■□□□ 1.22
FGFR3-204ENST00000412135 RAPGEF2Q9Y4G8 1499 aa22.67■■□□□ 1.22
FGFR3-204ENST00000412135 RRP7BPQ9NSQ0 103 aa22.67■■□□□ 1.22
FGFR3-204ENST00000412135 CCNB3Q8WWL7 1395 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms