Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 PVT1-216ENST00000523068 844 ntTSL 5 BASIC12.14□□□□□ -0.472e-7■■■■□ 23.7
XRCC6P12956 DLEU1-207ENST00000467721 1455 ntTSL 5 BASIC12.13□□□□□ -0.479e-6■■■■□ 23.7
XRCC6P12956 DLEU1-229ENST00000486895 481 ntTSL 1 (best) BASIC11.97□□□□□ -0.499e-6■■■■□ 23.7
XRCC6P12956 DLEU1-209ENST00000468522 1158 ntTSL 5 BASIC11.87□□□□□ -0.519e-6■■■■□ 23.7
XRCC6P12956 DLEU1-234ENST00000491615 1451 ntTSL 5 BASIC11.81□□□□□ -0.529e-6■■■■□ 23.7
XRCC6P12956 ATXN10-204ENST00000435026 653 ntTSL 311.41□□□□□ -0.589e-6■■■■□ 23.7
XRCC6P12956 DLEU1-206ENST00000463474 1048 ntTSL 1 (best) BASIC10.71□□□□□ -0.699e-6■■■■□ 23.7
XRCC6P12956 DLEU1-228ENST00000485007 736 ntTSL 510.53□□□□□ -0.729e-6■■■■□ 23.7
XRCC6P12956 HSD17B7P2-201ENST00000471365 1033 ntBASIC10.51□□□□□ -0.739e-6■■■■□ 23.7
XRCC6P12956 DLEU1-225ENST00000484529 400 ntTSL 1 (best)9.8□□□□□ -0.849e-6■■■■□ 23.7
XRCC6P12956 PVT1-207ENST00000518528 624 ntTSL 39.79□□□□□ -0.842e-7■■■■□ 23.7
XRCC6P12956 RREB1-207ENST00000475946 9067 ntTSL 1 (best)9.41□□□□□ -0.99e-6■■■■□ 23.7
XRCC6P12956 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.949e-6■■■■□ 23.7
XRCC6P12956 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8.32□□□□□ -1.089e-6■■■■□ 23.7
XRCC6P12956 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.97□□□□□ -1.139e-6■■■■□ 23.7
XRCC6P12956 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.64□□□□□ -1.199e-6■■■■□ 23.7
XRCC6P12956 ATXN10-205ENST00000451241 514 ntTSL 36.53□□□□□ -1.369e-6■■■■□ 23.7
XRCC6P12956 ATXN10-210ENST00000493643 617 ntTSL 55.86□□□□□ -1.479e-6■■■■□ 23.7
XRCC6P12956 PVT1-205ENST00000517790 599 ntTSL 25.43□□□□□ -1.542e-7■■■■□ 23.7
XRCC6P12956 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.41□□□□□ -1.549e-6■■■■□ 23.7
XRCC6P12956 PWWP2A-203ENST00000520662 407 ntTSL 35.11□□□□□ -1.599e-6■■■■□ 23.7
XRCC6P12956 DLEU1-216ENST00000473075 348 ntTSL 55.07□□□□□ -1.69e-6■■■■□ 23.7
XRCC6P12956 DDX46-206ENST00000507053 530 ntTSL 44.79□□□□□ -1.649e-6■■■■□ 23.7
XRCC6P12956 DLEU1-224ENST00000483444 332 ntTSL 1 (best)4.32□□□□□ -1.729e-6■■■■□ 23.7
XRCC6P12956 MT-TP-201ENST00000387461 68 ntBASIC5.77□□□□□ -1.491e-323■■■■□ 23.7
XRCC6P12956 NME3-203ENST00000563367 891 ntTSL 331.55■■■□□ 2.646e-11■■■■□ 23.7
XRCC6P12956 NME3-209ENST00000566600 913 ntTSL 229.22■■■□□ 2.276e-11■■■■□ 23.7
XRCC6P12956 NME3-208ENST00000565379 911 ntTSL 228.98■■■□□ 2.236e-11■■■■□ 23.7
XRCC6P12956 NME3-202ENST00000561637 1014 ntTSL 228.04■■■□□ 2.086e-11■■■■□ 23.7
XRCC6P12956 NME3-206ENST00000564252 599 ntTSL 226.52■■□□□ 1.846e-11■■■■□ 23.7
XRCC6P12956 NME3-210ENST00000567271 752 ntTSL 224.18■■□□□ 1.466e-11■■■■□ 23.7
XRCC6P12956 NME3-207ENST00000564628 811 ntTSL 521.01■□□□□ 0.956e-11■■■■□ 23.7
XRCC6P12956 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.71■□□□□ 0.916e-11■■■■□ 23.7
XRCC6P12956 NME3-205ENST00000563854 583 ntTSL 519.6■□□□□ 0.736e-11■■■■□ 23.7
XRCC6P12956 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.396e-11■■■■□ 23.7
XRCC6P12956 NME3-211ENST00000568561 813 ntTSL 1 (best)17.14■□□□□ 0.336e-11■■■■□ 23.7
XRCC6P12956 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC14.25□□□□□ -0.132e-23■■■■□ 23.7
XRCC6P12956 PUM1-208ENST00000471894 812 ntTSL 311.76□□□□□ -0.532e-23■■■■□ 23.7
XRCC6P12956 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.532e-23■■■■□ 23.7
XRCC6P12956 PUM1-210ENST00000490546 707 ntTSL 411.56□□□□□ -0.562e-23■■■■□ 23.7
XRCC6P12956 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC10.64□□□□□ -0.712e-23■■■■□ 23.7
XRCC6P12956 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.782e-23■■■■□ 23.7
XRCC6P12956 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC9.08□□□□□ -0.962e-23■■■■□ 23.7
XRCC6P12956 PUM1-223ENST00000532678 793 ntTSL 48.9□□□□□ -0.982e-23■■■■□ 23.7
XRCC6P12956 PUM1-211ENST00000498419 3068 ntTSL 58.26□□□□□ -1.092e-23■■■■□ 23.7
XRCC6P12956 PUM1-214ENST00000525843 4528 ntTSL 58.26□□□□□ -1.092e-23■■■■□ 23.7
XRCC6P12956 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.75□□□□□ -1.172e-23■■■■□ 23.7
XRCC6P12956 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.262e-23■■■■□ 23.7
XRCC6P12956 FCHSD1-205ENST00000520747 3181 ntTSL 216.18■□□□□ 0.188e-8■■■■□ 23.6
XRCC6P12956 FCHSD1-210ENST00000523856 3932 ntTSL 214.9□□□□□ -0.028e-8■■■■□ 23.6
XRCC6P12956 FCHSD1-201ENST00000435817 4320 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.158e-8■■■■□ 23.6
XRCC6P12956 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC27.82■■■□□ 2.045e-8■■■■□ 23.6
XRCC6P12956 H2AFY-211ENST00000507868 861 ntTSL 226.63■■□□□ 1.855e-8■■■■□ 23.6
XRCC6P12956 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.63■■□□□ 1.855e-8■■■■□ 23.6
XRCC6P12956 H2AFY-212ENST00000508120 536 ntTSL 325.38■■□□□ 1.655e-8■■■■□ 23.6
XRCC6P12956 SMG1P3-202ENST00000437413 589 ntTSL 424.56■■□□□ 1.525e-8■■■■□ 23.6
XRCC6P12956 H2AFY-210ENST00000506671 1905 ntTSL 520.65■□□□□ 0.95e-8■■■■□ 23.6
XRCC6P12956 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC20.12■□□□□ 0.815e-8■■■■□ 23.6
XRCC6P12956 SMG1P3-201ENST00000435197 416 ntTSL 319.83■□□□□ 0.775e-8■■■■□ 23.6
XRCC6P12956 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.95■□□□□ 0.465e-8■■■■□ 23.6
XRCC6P12956 H2AFY-213ENST00000508785 966 ntTSL 217.75■□□□□ 0.435e-8■■■■□ 23.6
XRCC6P12956 H2AFY-203ENST00000360597 1772 ntTSL 515.79■□□□□ 0.125e-8■■■■□ 23.6
XRCC6P12956 GTF3C2-204ENST00000423998 828 ntTSL 515.49■□□□□ 0.075e-8■■■■□ 23.6
XRCC6P12956 H2AFY-201ENST00000304332 1881 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.165e-8■■■■□ 23.6
XRCC6P12956 GTF3C2-208ENST00000457748 557 ntTSL 513.9□□□□□ -0.185e-8■■■■□ 23.6
XRCC6P12956 H2AFY-219ENST00000513210 775 ntTSL 213.82□□□□□ -0.25e-8■■■■□ 23.6
XRCC6P12956 H2AFY-206ENST00000504197 498 ntTSL 213.65□□□□□ -0.225e-8■■■■□ 23.6
XRCC6P12956 GTF3C2-201ENST00000264720 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.265e-8■■■■□ 23.6
XRCC6P12956 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.615e-8■■■■□ 23.6
XRCC6P12956 H2AFY-215ENST00000510038 1314 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.675e-8■■■■□ 23.6
XRCC6P12956 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.235e-8■■■■□ 23.6
XRCC6P12956 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.245e-8■■■■□ 23.6
XRCC6P12956 HDLBP-218ENST00000441124 708 ntTSL 220.26■□□□□ 0.833e-6■■■■□ 23.5
XRCC6P12956 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.13e-6■■■■□ 23.5
XRCC6P12956 HDLBP-210ENST00000423693 544 ntTSL 514.52□□□□□ -0.093e-6■■■■□ 23.5
XRCC6P12956 HDLBP-246ENST00000496569 374 ntTSL 413.53□□□□□ -0.243e-6■■■■□ 23.5
XRCC6P12956 HDLBP-207ENST00000420451 559 ntTSL 411.83□□□□□ -0.523e-6■■■■□ 23.5
XRCC6P12956 HDLBP-205ENST00000413241 581 ntTSL 511.3□□□□□ -0.63e-6■■■■□ 23.5
XRCC6P12956 HDLBP-206ENST00000417540 525 ntTSL 411.27□□□□□ -0.613e-6■■■■□ 23.5
XRCC6P12956 HDLBP-216ENST00000428482 1096 ntTSL 511.27□□□□□ -0.613e-6■■■■□ 23.5
XRCC6P12956 HDLBP-201ENST00000310931 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.613e-6■■■■□ 23.5
XRCC6P12956 HDLBP-230ENST00000462130 464 ntTSL 411.13□□□□□ -0.633e-6■■■■□ 23.5
XRCC6P12956 HDLBP-211ENST00000425989 530 ntTSL 510.8□□□□□ -0.683e-6■■■■□ 23.5
XRCC6P12956 CYP4F3-205ENST00000588886 375 ntTSL 215.96■□□□□ 0.158e-7■■■■□ 23.5
XRCC6P12956 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.148e-7■■■■□ 23.5
XRCC6P12956 CYP4F3-206ENST00000591058 2983 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.068e-7■■■■□ 23.5
XRCC6P12956 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.028e-7■■■■□ 23.5
XRCC6P12956 A2M-212ENST00000545828 471 ntTSL 46.03□□□□□ -1.448e-7■■■■□ 23.5
XRCC6P12956 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC23.84■■□□□ 1.415e-8■■■■□ 23.5
XRCC6P12956 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.065e-8■■■■□ 23.5
XRCC6P12956 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.055e-8■■■■□ 23.5
XRCC6P12956 MYC-204ENST00000520751 577 ntTSL 321.23■□□□□ 0.995e-8■■■■□ 23.5
XRCC6P12956 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.825e-8■■■■□ 23.5
XRCC6P12956 MYC-203ENST00000517291 1023 ntTSL 1 (best)15.94■□□□□ 0.145e-8■■■■□ 23.5
XRCC6P12956 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.185e-8■■■■□ 23.5
XRCC6P12956 LSS-210ENST00000491729 2143 ntTSL 215.94■□□□□ 0.149e-10■■■■□ 23.4
XRCC6P12956 LSS-208ENST00000474319 3601 ntTSL 213.51□□□□□ -0.259e-10■■■■□ 23.4
XRCC6P12956 LSS-203ENST00000419093 517 ntTSL 311.08□□□□□ -0.649e-10■■■■□ 23.4
XRCC6P12956 ANKRD10-210ENST00000494859 705 ntTSL 532.88■■■□□ 2.852e-19■■■■□ 23.3
XRCC6P12956 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.87■■□□□ 1.417e-7■■■■□ 23.3
Retrieved 100 of 6,788 protein–RNA pairs in 88.8 ms