RNA–Protein interactions for RNA: ENST00000424085.6

PUM1-205, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 5 BASIC

Gene PUM1, Length 4,631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-205ENST00000424085 DCAF8L2P0C7V8 631 aa13.94□□□□□ -0.18
PUM1-205ENST00000424085 NISCHQ9Y2I1 1504 aa13.42□□□□□ -0.26
PUM1-205ENST00000424085 SUPT5HO00267 1087 aaKnown RBP12.8□□□□□ -0.36
PUM1-205ENST00000424085 FAM9AQ8IZU1 332 aaPredicted RBP12.7□□□□□ -0.38
PUM1-205ENST00000424085 SHROOM4Q9ULL8 1493 aa12.56□□□□□ -0.4
PUM1-205ENST00000424085 APLP2Q06481 763 aa12.53□□□□□ -0.4
PUM1-205ENST00000424085 EHMT2Q96KQ7 1210 aa12.47□□□□□ -0.41
PUM1-205ENST00000424085 PELP1Q8IZL8 1130 aaKnown RBP12.25□□□□□ -0.45
PUM1-205ENST00000424085 ATP1B4Q9UN42 357 aaPredicted RBP12.12□□□□□ -0.47
PUM1-205ENST00000424085 PCGF6Q9BYE7 350 aa12.09□□□□□ -0.47
PUM1-205ENST00000424085 RANGAP1P46060 587 aaPredicted RBP12.07□□□□□ -0.48
PUM1-205ENST00000424085 TTBK1Q5TCY1 1321 aaPredicted RBP12.01□□□□□ -0.49
PUM1-205ENST00000424085 MYT1LQ9UL68 1186 aa11.92□□□□□ -0.5
PUM1-205ENST00000424085 UBTFP17480 764 aaKnown RBP11.9□□□□□ -0.5
PUM1-205ENST00000424085 TRIM41Q8WV44 630 aa11.9□□□□□ -0.5
PUM1-205ENST00000424085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.8□□□□□ -0.52
PUM1-205ENST00000424085 HNRNPUL2Q1KMD3 747 aaKnown RBP11.8□□□□□ -0.52
PUM1-205ENST00000424085 ZEB1P37275 1124 aaPredicted RBP11.79□□□□□ -0.52
PUM1-205ENST00000424085 HRCP23327 699 aa11.77□□□□□ -0.53
PUM1-205ENST00000424085 CCER1Q8TC90 406 aaPredicted RBP11.74□□□□□ -0.53
PUM1-205ENST00000424085 CHIC1Q5VXU3 224 aa11.73□□□□□ -0.53
PUM1-205ENST00000424085 ERICH6Q7L0X2 663 aa11.67□□□□□ -0.54
PUM1-205ENST00000424085 TRIM26Q12899 539 aaPredicted RBP11.65□□□□□ -0.54
PUM1-205ENST00000424085 CENPBP07199 599 aaPredicted RBP11.6□□□□□ -0.55
PUM1-205ENST00000424085 LOC105371045A0A1W2PR82 267 aa11.6□□□□□ -0.55
PUM1-205ENST00000424085 NEFLP07196 543 aa11.59□□□□□ -0.55
PUM1-205ENST00000424085 POLR3GLQ9BT43 218 aa11.52□□□□□ -0.57
PUM1-205ENST00000424085 PPARGC1BQ86YN6 1023 aaKnown RBP11.51□□□□□ -0.57
PUM1-205ENST00000424085 ITGAEP38570 1179 aa11.49□□□□□ -0.57
PUM1-205ENST00000424085 SLC4A1APQ9BWU0 796 aaKnown RBP11.47□□□□□ -0.57
PUM1-205ENST00000424085 FBLN2P98095 1184 aa11.36□□□□□ -0.59
PUM1-205ENST00000424085 DAXXQ9UER7 740 aaPredicted RBP11.35□□□□□ -0.59
PUM1-205ENST00000424085 YTHDC1Q96MU7 727 aaKnown RBP11.33□□□□□ -0.6
PUM1-205ENST00000424085 PABPN1Q86U42 306 aaKnown RBP eCLIP11.32□□□□□ -0.6
PUM1-205ENST00000424085 CNGB1Q14028 1251 aaPredicted RBP11.32□□□□□ -0.6
PUM1-205ENST00000424085 ABCC9O60706 1549 aa11.25□□□□□ -0.61
PUM1-205ENST00000424085 MYT1Q01538 1121 aa11.25□□□□□ -0.61
PUM1-205ENST00000424085 BCANQ96GW7 911 aa11.24□□□□□ -0.61
PUM1-205ENST00000424085 ESF1Q9H501 851 aaKnown RBP11.23□□□□□ -0.61
PUM1-205ENST00000424085 TRIM52Q96A61 297 aa11.21□□□□□ -0.61
PUM1-205ENST00000424085 ZCCHC6Q5VYS8 1495 aaKnown RBP11.21□□□□□ -0.61
PUM1-205ENST00000424085 FAM50AQ14320 339 aaKnown RBP11.2□□□□□ -0.62
PUM1-205ENST00000424085 DIEXFQ68CQ4 756 aaKnown RBP11.18□□□□□ -0.62
PUM1-205ENST00000424085 CLSPNQ9HAW4 1339 aa11.17□□□□□ -0.62
PUM1-205ENST00000424085 NPM1P06748 294 aaKnown RBP eCLIP11.14□□□□□ -0.63
PUM1-205ENST00000424085 SLC24A1O60721 1099 aa11.14□□□□□ -0.63
PUM1-205ENST00000424085 DCAF1Q9Y4B6 1507 aa11.13□□□□□ -0.63
PUM1-205ENST00000424085 ZBTB47Q9UFB7 747 aaPredicted RBP11.12□□□□□ -0.63
PUM1-205ENST00000424085 NEFMP07197 916 aa11.11□□□□□ -0.63
PUM1-205ENST00000424085 ZNF326Q5BKZ1 582 aaKnown RBP11.08□□□□□ -0.63
PUM1-205ENST00000424085 CDK11AQ9UQ88 783 aaPredicted RBP11.05□□□□□ -0.64
PUM1-205ENST00000424085 MYO15BQ96JP2 1530 aa11.05□□□□□ -0.64
PUM1-205ENST00000424085 STAG3Q9UJ98 1225 aa11.04□□□□□ -0.64
PUM1-205ENST00000424085 PLPPR3Q6T4P5 718 aa11.02□□□□□ -0.64
PUM1-205ENST00000424085 GTF3C3Q9Y5Q9 886 aa11.02□□□□□ -0.65
PUM1-205ENST00000424085 ZNF316A6NFI3 1004 aaPredicted RBP11.01□□□□□ -0.65
PUM1-205ENST00000424085 ARID3CA6NKF2 412 aa10.99□□□□□ -0.65
PUM1-205ENST00000424085 CCDC180Q9P1Z9 1646 aa10.99□□□□□ -0.65
PUM1-205ENST00000424085 ZNF777Q9ULD5 760 aaPredicted RBP10.99□□□□□ -0.65
PUM1-205ENST00000424085 NEUROD1Q13562 356 aa10.98□□□□□ -0.65
PUM1-205ENST00000424085 ACIN1Q9UKV3 1341 aaKnown RBP10.97□□□□□ -0.65
PUM1-205ENST00000424085 CHGAP10645 457 aaKnown RBP10.94□□□□□ -0.66
PUM1-205ENST00000424085 P3H3Q8IVL6 736 aa10.93□□□□□ -0.66
PUM1-205ENST00000424085 CANXP27824 592 aaKnown RBP10.91□□□□□ -0.66
PUM1-205ENST00000424085 CSRNP3Q8WYN3 585 aa10.91□□□□□ -0.66
PUM1-205ENST00000424085 BCL11AQ9H165 835 aa10.9□□□□□ -0.66
PUM1-205ENST00000424085 SCRIBQ14160 1630 aa10.89□□□□□ -0.67
PUM1-205ENST00000424085 RTL5Q5HYW3 569 aaPredicted RBP10.87□□□□□ -0.67
PUM1-205ENST00000424085 ANP32CO43423 234 aa10.85□□□□□ -0.67
PUM1-205ENST00000424085 NPM2Q86SE8 214 aaKnown RBP10.83□□□□□ -0.68
PUM1-205ENST00000424085 SCAF1Q9H7N4 1312 aaKnown RBP10.82□□□□□ -0.68
PUM1-205ENST00000424085 A0A0G2JS52 829 aa10.81□□□□□ -0.68
PUM1-205ENST00000424085 RSF1Q96T23 1441 aaPredicted RBP10.8□□□□□ -0.68
PUM1-205ENST00000424085 CHMP7Q8WUX9 453 aaPredicted RBP10.78□□□□□ -0.68
PUM1-205ENST00000424085 TSPY4P0CV99 314 aa10.76□□□□□ -0.69
PUM1-205ENST00000424085 TSPY10P0CW01 314 aa10.76□□□□□ -0.69
PUM1-205ENST00000424085 C14orf37Q86TY3 774 aa10.75□□□□□ -0.69
PUM1-205ENST00000424085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.73□□□□□ -0.692e-6■□□□□ 10.4
PUM1-205ENST00000424085 PPP1R15AO75807 674 aaPredicted RBP10.71□□□□□ -0.69
PUM1-205ENST00000424085 HAP1P54257 671 aaPredicted RBP10.71□□□□□ -0.69
PUM1-205ENST00000424085 ARID4BQ4LE39 1312 aaPredicted RBP10.7□□□□□ -0.7
PUM1-205ENST00000424085 MIER1Q8N108 512 aa10.64□□□□□ -0.71
PUM1-205ENST00000424085 PLEKHG5O94827 1062 aa10.64□□□□□ -0.71
PUM1-205ENST00000424085 KCNH8Q96L42 1107 aa10.64□□□□□ -0.71
PUM1-205ENST00000424085 TONSLQ96HA7 1378 aa10.63□□□□□ -0.71
PUM1-205ENST00000424085 CEP162Q5TB80 1403 aa10.63□□□□□ -0.71
PUM1-205ENST00000424085 ZBTB7CA1YPR0 619 aa10.63□□□□□ -0.71
PUM1-205ENST00000424085 TRHP20396 242 aaPredicted RBP10.62□□□□□ -0.71
PUM1-205ENST00000424085 RB1CC1Q8TDY2 1594 aa10.61□□□□□ -0.71
PUM1-205ENST00000424085 HSP90AA1P07900 732 aaKnown RBP10.6□□□□□ -0.71
PUM1-205ENST00000424085 EEA1Q15075 1411 aa10.6□□□□□ -0.71
PUM1-205ENST00000424085 CHIC2Q9UKJ5 165 aa10.6□□□□□ -0.71
PUM1-205ENST00000424085 PLEKHD1A6NEE1 506 aa10.6□□□□□ -0.71
PUM1-205ENST00000424085 CLIP1P30622 1438 aa10.59□□□□□ -0.71
PUM1-205ENST00000424085 TNIKQ9UKE5 1360 aa10.57□□□□□ -0.72
PUM1-205ENST00000424085 MTUS2Q5JR59 1369 aa10.57□□□□□ -0.72
PUM1-205ENST00000424085 GOLGA3Q08378 1498 aa10.56□□□□□ -0.72
PUM1-205ENST00000424085 UPF2Q9HAU5 1272 aaKnown RBP10.56□□□□□ -0.72
PUM1-205ENST00000424085 FKBP8Q14318 412 aa10.55□□□□□ -0.72
PUM1-205ENST00000424085 DDX10Q13206 875 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms