RNA–Protein interactions for RNA: ENST00000522841.6

SMG1P3-206, Transcript of SMG1 pseudogene 3, humanhuman

TSL 2 BASIC

Gene SMG1P3, Length 2,774 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-206ENST00000522841 NISCHQ9Y2I1 1504 aa34.15■■■■□ 3.06
SMG1P3-206ENST00000522841 SHROOM4Q9ULL8 1493 aa29.2■■■□□ 2.26
SMG1P3-206ENST00000522841 CCDC180Q9P1Z9 1646 aa29.06■■■□□ 2.24
SMG1P3-206ENST00000522841 ZCCHC6Q5VYS8 1495 aaKnown RBP28.83■■■□□ 2.21
SMG1P3-206ENST00000522841 DCAF8L2P0C7V8 631 aa28.57■■■□□ 2.16
SMG1P3-206ENST00000522841 SUPT5HO00267 1087 aaKnown RBP28.53■■■□□ 2.16
SMG1P3-206ENST00000522841 DCAF1Q9Y4B6 1507 aa27.91■■■□□ 2.06
SMG1P3-206ENST00000522841 CHIC1Q5VXU3 224 aa27.62■■■□□ 2.01
SMG1P3-206ENST00000522841 MYO15BQ96JP2 1530 aa27.49■■□□□ 1.99
SMG1P3-206ENST00000522841 SCRIBQ14160 1630 aa27.37■■□□□ 1.97
SMG1P3-206ENST00000522841 ABCC9O60706 1549 aa27.23■■□□□ 1.95
SMG1P3-206ENST00000522841 RSF1Q96T23 1441 aaPredicted RBP26.98■■□□□ 1.91
SMG1P3-206ENST00000522841 NACADO15069 1562 aa26.91■■□□□ 1.9
SMG1P3-206ENST00000522841 LOC105371045A0A1W2PR82 267 aa26.89■■□□□ 1.89
SMG1P3-206ENST00000522841 RB1CC1Q8TDY2 1594 aa26.74■■□□□ 1.87
SMG1P3-206ENST00000522841 CECR2Q9BXF3 1484 aa26.72■■□□□ 1.87
SMG1P3-206ENST00000522841 PCGF6Q9BYE7 350 aa26.71■■□□□ 1.87
SMG1P3-206ENST00000522841 MROH2BQ7Z745 1585 aa26.6■■□□□ 1.85
SMG1P3-206ENST00000522841 HRCP23327 699 aa26.56■■□□□ 1.84
SMG1P3-206ENST00000522841 TRIM41Q8WV44 630 aa26.52■■□□□ 1.84
SMG1P3-206ENST00000522841 WIZO95785 1651 aa26.48■■□□□ 1.83
SMG1P3-206ENST00000522841 FAM9AQ8IZU1 332 aaPredicted RBP26.41■■□□□ 1.82
SMG1P3-206ENST00000522841 EHMT2Q96KQ7 1210 aa26.29■■□□□ 1.8
SMG1P3-206ENST00000522841 UNC13AQ9UPW8 1703 aa26.23■■□□□ 1.79
SMG1P3-206ENST00000522841 BAZ1AQ9NRL2 1556 aaPredicted RBP26.23■■□□□ 1.79
SMG1P3-206ENST00000522841 PPARGC1BQ86YN6 1023 aaKnown RBP26.16■■□□□ 1.78
SMG1P3-206ENST00000522841 TRIM26Q12899 539 aaPredicted RBP26.14■■□□□ 1.77
SMG1P3-206ENST00000522841 SMARCA4P51532 1647 aa26.06■■□□□ 1.76
SMG1P3-206ENST00000522841 PABPN1Q86U42 306 aaKnown RBP eCLIP26.05■■□□□ 1.765e-6■■■■□ 22.2
SMG1P3-206ENST00000522841 TOP2AP11388 1531 aaKnown RBP25.98■■□□□ 1.75
SMG1P3-206ENST00000522841 EIF4G1Q04637 1599 aaKnown RBP25.96■■□□□ 1.75
SMG1P3-206ENST00000522841 CCDC88BA6NC98 1476 aa25.9■■□□□ 1.74
SMG1P3-206ENST00000522841 SMARCA2P51531 1590 aa25.86■■□□□ 1.73
SMG1P3-206ENST00000522841 BICRAQ9NZM4 1560 aa25.86■■□□□ 1.73
SMG1P3-206ENST00000522841 ABCC8Q09428 1581 aa25.85■■□□□ 1.73
SMG1P3-206ENST00000522841 SOGA1O94964 1423 aa25.55■■□□□ 1.68
SMG1P3-206ENST00000522841 PEG3Q9GZU2 1588 aa25.48■■□□□ 1.67
SMG1P3-206ENST00000522841 RUSC2Q8N2Y8 1516 aa25.46■■□□□ 1.67
SMG1P3-206ENST00000522841 ZEB1P37275 1124 aaPredicted RBP25.45■■□□□ 1.66
SMG1P3-206ENST00000522841 ATAD2BQ9ULI0 1458 aa25.42■■□□□ 1.66
SMG1P3-206ENST00000522841 TTBK1Q5TCY1 1321 aaPredicted RBP25.38■■□□□ 1.65
SMG1P3-206ENST00000522841 BAZ1BQ9UIG0 1483 aaKnown RBP25.37■■□□□ 1.65
SMG1P3-206ENST00000522841 WRNQ14191 1432 aaPredicted RBP eCLIP25.36■■□□□ 1.652e-6■■■■□ 22.3
SMG1P3-206ENST00000522841 CSRNP3Q8WYN3 585 aa25.36■■□□□ 1.65
SMG1P3-206ENST00000522841 PELP1Q8IZL8 1130 aaKnown RBP25.34■■□□□ 1.65
SMG1P3-206ENST00000522841 CEP162Q5TB80 1403 aa25.33■■□□□ 1.65
SMG1P3-206ENST00000522841 UBTFP17480 764 aaKnown RBP25.32■■□□□ 1.64
SMG1P3-206ENST00000522841 SYNJ1O43426 1573 aa25.28■■□□□ 1.64
SMG1P3-206ENST00000522841 TNIKQ9UKE5 1360 aa25.25■■□□□ 1.63
SMG1P3-206ENST00000522841 EEA1Q15075 1411 aa25.25■■□□□ 1.63
SMG1P3-206ENST00000522841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.22■■□□□ 1.63
SMG1P3-206ENST00000522841 GOLGA3Q08378 1498 aa25.15■■□□□ 1.62
SMG1P3-206ENST00000522841 CCER1Q8TC90 406 aaPredicted RBP25.1■■□□□ 1.61
SMG1P3-206ENST00000522841 SCAF1Q9H7N4 1312 aaKnown RBP25.02■■□□□ 1.6
SMG1P3-206ENST00000522841 CEP164Q9UPV0 1460 aa25.01■■□□□ 1.59
SMG1P3-206ENST00000522841 RANGAP1P46060 587 aaPredicted RBP24.99■■□□□ 1.59
SMG1P3-206ENST00000522841 KIF21BO75037 1637 aa24.96■■□□□ 1.59
SMG1P3-206ENST00000522841 RAPGEF2Q9Y4G8 1499 aa24.92■■□□□ 1.58
SMG1P3-206ENST00000522841 TOP2BQ02880 1626 aa24.92■■□□□ 1.58
SMG1P3-206ENST00000522841 NCAPD3P42695 1498 aa24.91■■□□□ 1.58
SMG1P3-206ENST00000522841 CLIP1P30622 1438 aa24.89■■□□□ 1.58
SMG1P3-206ENST00000522841 HMGXB3Q12766 1538 aa24.88■■□□□ 1.57
SMG1P3-206ENST00000522841 BIVM-ERCC5R4GMW8 1640 aa24.83■■□□□ 1.57
SMG1P3-206ENST00000522841 CUX1P39880 1505 aa24.76■■□□□ 1.55
SMG1P3-206ENST00000522841 VPS8Q8N3P4 1428 aa24.73■■□□□ 1.55
SMG1P3-206ENST00000522841 HNRNPUL2Q1KMD3 747 aaKnown RBP24.71■■□□□ 1.55
SMG1P3-206ENST00000522841 CFTRP13569 1480 aa24.68■■□□□ 1.54
SMG1P3-206ENST00000522841 APLP2Q06481 763 aa24.67■■□□□ 1.54
SMG1P3-206ENST00000522841 PRXQ9BXM0 1461 aa24.62■■□□□ 1.53
SMG1P3-206ENST00000522841 KIF27Q86VH2 1401 aa24.58■■□□□ 1.52
SMG1P3-206ENST00000522841 ERICH3Q5RHP9 1530 aa24.57■■□□□ 1.52
SMG1P3-206ENST00000522841 DIEXFQ68CQ4 756 aaKnown RBP24.53■■□□□ 1.52
SMG1P3-206ENST00000522841 ARAP1Q96P48 1450 aa24.51■■□□□ 1.51
SMG1P3-206ENST00000522841 PRDM2Q13029 1718 aa24.49■■□□□ 1.51
SMG1P3-206ENST00000522841 CC2D2AQ9P2K1 1620 aa24.46■■□□□ 1.51
SMG1P3-206ENST00000522841 CADPSQ9ULU8 1353 aa24.46■■□□□ 1.51
SMG1P3-206ENST00000522841 CUX2O14529 1486 aa24.43■■□□□ 1.5
SMG1P3-206ENST00000522841 KANK4Q5T7N3 995 aaPredicted RBP24.42■■□□□ 1.5
SMG1P3-206ENST00000522841 FGD5Q6ZNL6 1462 aa24.36■■□□□ 1.49
SMG1P3-206ENST00000522841 ZNF316A6NFI3 1004 aaPredicted RBP24.36■■□□□ 1.49
SMG1P3-206ENST00000522841 IGF1RP08069 1367 aa24.33■■□□□ 1.49
SMG1P3-206ENST00000522841 ARHGAP35Q9NRY4 1499 aa24.32■■□□□ 1.48
SMG1P3-206ENST00000522841 MYT1Q01538 1121 aa24.3■■□□□ 1.48
SMG1P3-206ENST00000522841 NEUROD1Q13562 356 aa24.27■■□□□ 1.48
SMG1P3-206ENST00000522841 FANCD2Q9BXW9 1451 aa24.26■■□□□ 1.47
SMG1P3-206ENST00000522841 ACIN1Q9UKV3 1341 aaKnown RBP24.25■■□□□ 1.47
SMG1P3-206ENST00000522841 CARMIL1Q5VZK9 1371 aa24.24■■□□□ 1.47
SMG1P3-206ENST00000522841 NESP48681 1621 aa24.22■■□□□ 1.47
SMG1P3-206ENST00000522841 RAD54L2Q9Y4B4 1467 aa24.17■■□□□ 1.46
SMG1P3-206ENST00000522841 ITGAEP38570 1179 aa24.15■■□□□ 1.46
SMG1P3-206ENST00000522841 GTF3C3Q9Y5Q9 886 aa24.15■■□□□ 1.46
SMG1P3-206ENST00000522841 P3H3Q8IVL6 736 aa24.14■■□□□ 1.46
SMG1P3-206ENST00000522841 DHX57Q6P158 1386 aaKnown RBP24.11■■□□□ 1.45
SMG1P3-206ENST00000522841 RRBP1Q9P2E9 1410 aaKnown RBP24.1■■□□□ 1.45
SMG1P3-206ENST00000522841 DNMBPQ6XZF7 1577 aa24.09■■□□□ 1.45
SMG1P3-206ENST00000522841 TOPBP1Q92547 1522 aa24.08■■□□□ 1.45
SMG1P3-206ENST00000522841 POLA1P09884 1462 aaPredicted RBP24.07■■□□□ 1.44
SMG1P3-206ENST00000522841 CCNB3Q8WWL7 1395 aa24.06■■□□□ 1.44
SMG1P3-206ENST00000522841 CENPBP07199 599 aaPredicted RBP24.06■■□□□ 1.44
SMG1P3-206ENST00000522841 ATP1B4Q9UN42 357 aaPredicted RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms