RNA–Protein interactions for RNA: ENST00000462130.1

HDLBP-230, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-230ENST00000462130 AEBP2Q6ZN18 517 aaPredicted RBP26.1■■□□□ 1.77
HDLBP-230ENST00000462130 NISCHQ9Y2I1 1504 aa25.18■■□□□ 1.62
HDLBP-230ENST00000462130 CHIC1Q5VXU3 224 aa24.56■■□□□ 1.52
HDLBP-230ENST00000462130 ABCC9O60706 1549 aa22.71■■□□□ 1.23
HDLBP-230ENST00000462130 CCDC180Q9P1Z9 1646 aa22.67■■□□□ 1.22
HDLBP-230ENST00000462130 SENP3Q9H4L4 574 aaPredicted RBP22.27■■□□□ 1.16
HDLBP-230ENST00000462130 PHF23Q9BUL5 403 aaPredicted RBP21.98■■□□□ 1.11
HDLBP-230ENST00000462130 RB1CC1Q8TDY2 1594 aa21.6■■□□□ 1.05
HDLBP-230ENST00000462130 NACADO15069 1562 aa21.42■■□□□ 1.02
HDLBP-230ENST00000462130 DCAF8L2P0C7V8 631 aa21.37■■□□□ 1.01
HDLBP-230ENST00000462130 DNAJC5BQ9UF47 199 aa21.29■■□□□ 1
HDLBP-230ENST00000462130 UNC13AQ9UPW8 1703 aa21.16■□□□□ 0.98
HDLBP-230ENST00000462130 PABPN1Q86U42 306 aaKnown RBP eCLIP21.12■□□□□ 0.97
HDLBP-230ENST00000462130 MYO15BQ96JP2 1530 aa21.06■□□□□ 0.96
HDLBP-230ENST00000462130 BICRAQ9NZM4 1560 aa20.93■□□□□ 0.94
HDLBP-230ENST00000462130 ZCCHC6Q5VYS8 1495 aaKnown RBP20.85■□□□□ 0.93
HDLBP-230ENST00000462130 FOXD1Q16676 465 aa20.81■□□□□ 0.92
HDLBP-230ENST00000462130 DCAF1Q9Y4B6 1507 aa20.78■□□□□ 0.92
HDLBP-230ENST00000462130 SCRIBQ14160 1630 aa20.65■□□□□ 0.9
HDLBP-230ENST00000462130 SHROOM4Q9ULL8 1493 aa20.64■□□□□ 0.89
HDLBP-230ENST00000462130 CC2D2AQ9P2K1 1620 aa20.52■□□□□ 0.88
HDLBP-230ENST00000462130 CECR2Q9BXF3 1484 aa20.45■□□□□ 0.86
HDLBP-230ENST00000462130 EIF4G1Q04637 1599 aaKnown RBP20.44■□□□□ 0.86
HDLBP-230ENST00000462130 NCAPD3P42695 1498 aa19.74■□□□□ 0.75
HDLBP-230ENST00000462130 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
HDLBP-230ENST00000462130 ATAD2BQ9ULI0 1458 aa19.68■□□□□ 0.74
HDLBP-230ENST00000462130 SMARCA2P51531 1590 aa19.66■□□□□ 0.74
HDLBP-230ENST00000462130 ERCC6Q03468 1493 aa19.64■□□□□ 0.73
HDLBP-230ENST00000462130 DNAJC5Q9H3Z4 198 aa19.62■□□□□ 0.73
HDLBP-230ENST00000462130 HMGXB3Q12766 1538 aa19.61■□□□□ 0.73
HDLBP-230ENST00000462130 CUX2O14529 1486 aa19.58■□□□□ 0.72
HDLBP-230ENST00000462130 BAZ1AQ9NRL2 1556 aaPredicted RBP19.57■□□□□ 0.72
HDLBP-230ENST00000462130 MSH5O43196 834 aa19.53■□□□□ 0.72
HDLBP-230ENST00000462130 PLPPR3Q6T4P5 718 aa19.52■□□□□ 0.72
HDLBP-230ENST00000462130 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.72
HDLBP-230ENST00000462130 NESP48681 1621 aa19.47■□□□□ 0.71
HDLBP-230ENST00000462130 POTEDQ86YR6 584 aa19.47■□□□□ 0.71
HDLBP-230ENST00000462130 PEG3Q9GZU2 1588 aa19.46■□□□□ 0.71
HDLBP-230ENST00000462130 MROH2BQ7Z745 1585 aa19.4■□□□□ 0.7
HDLBP-230ENST00000462130 PIAS4Q8N2W9 510 aaPredicted RBP19.38■□□□□ 0.69
HDLBP-230ENST00000462130 LAMC3Q9Y6N6 1575 aa19.36■□□□□ 0.69
HDLBP-230ENST00000462130 PPP6R1Q9UPN7 881 aa19.31■□□□□ 0.68
HDLBP-230ENST00000462130 THOC2Q8NI27 1593 aaKnown RBP19.29■□□□□ 0.68
HDLBP-230ENST00000462130 KIF21AQ7Z4S6 1674 aa19.28■□□□□ 0.68
HDLBP-230ENST00000462130 PDS5BQ9NTI5 1447 aa19.24■□□□□ 0.67
HDLBP-230ENST00000462130 ADRA2BP18089 450 aa19.22■□□□□ 0.67
HDLBP-230ENST00000462130 WIZO95785 1651 aa19.21■□□□□ 0.67
HDLBP-230ENST00000462130 CADPSQ9ULU8 1353 aa19.16■□□□□ 0.66
HDLBP-230ENST00000462130 MRC2Q9UBG0 1479 aa19.06■□□□□ 0.64
HDLBP-230ENST00000462130 WDR62O43379 1518 aa19.01■□□□□ 0.63
HDLBP-230ENST00000462130 CEP164Q9UPV0 1460 aa18.99■□□□□ 0.63
HDLBP-230ENST00000462130 RSF1Q96T23 1441 aaPredicted RBP18.97■□□□□ 0.63
HDLBP-230ENST00000462130 FANCD2Q9BXW9 1451 aa18.95■□□□□ 0.62
HDLBP-230ENST00000462130 TOP2AP11388 1531 aaKnown RBP18.94■□□□□ 0.62
HDLBP-230ENST00000462130 CFTRP13569 1480 aa18.91■□□□□ 0.62
HDLBP-230ENST00000462130 PRDM2Q13029 1718 aa18.83■□□□□ 0.6
HDLBP-230ENST00000462130 TRIM41Q8WV44 630 aa18.8■□□□□ 0.6
HDLBP-230ENST00000462130 URB2Q14146 1524 aaKnown RBP18.78■□□□□ 0.6
HDLBP-230ENST00000462130 CCDC88BA6NC98 1476 aa18.71■□□□□ 0.59
HDLBP-230ENST00000462130 OSCARQ8IYS5 282 aa18.7■□□□□ 0.58
HDLBP-230ENST00000462130 IFT140Q96RY7 1462 aa18.6■□□□□ 0.57
HDLBP-230ENST00000462130 TOPBP1Q92547 1522 aa18.59■□□□□ 0.57
HDLBP-230ENST00000462130 ABCC8Q09428 1581 aa18.56■□□□□ 0.56
HDLBP-230ENST00000462130 ZNF608Q9ULD9 1512 aaPredicted RBP18.56■□□□□ 0.56
HDLBP-230ENST00000462130 DNMBPQ6XZF7 1577 aa18.53■□□□□ 0.56
HDLBP-230ENST00000462130 EIF4G3O43432 1585 aaKnown RBP18.49■□□□□ 0.55
HDLBP-230ENST00000462130 RIMBP3CA6NJZ7 1639 aa18.47■□□□□ 0.55
HDLBP-230ENST00000462130 RIMBP3BA6NNM3 1639 aa18.47■□□□□ 0.55
HDLBP-230ENST00000462130 RIMBP3Q9UFD9 1639 aa18.47■□□□□ 0.55
HDLBP-230ENST00000462130 TARBP1Q13395 1621 aaKnown RBP18.42■□□□□ 0.54
HDLBP-230ENST00000462130 CHD1O14646 1710 aa18.4■□□□□ 0.54
HDLBP-230ENST00000462130 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.542e-9■■■■□ 25.9
HDLBP-230ENST00000462130 POLA1P09884 1462 aaPredicted RBP18.39■□□□□ 0.53
HDLBP-230ENST00000462130 ARHGEF11O15085 1522 aa18.39■□□□□ 0.53
HDLBP-230ENST00000462130 FBLN2P98095 1184 aa18.35■□□□□ 0.53
HDLBP-230ENST00000462130 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.52
HDLBP-230ENST00000462130 SOGA1O94964 1423 aa18.32■□□□□ 0.52
HDLBP-230ENST00000462130 TDRD9Q8NDG6 1382 aaKnown RBP18.29■□□□□ 0.52
HDLBP-230ENST00000462130 CYB5RLQ6IPT4 315 aa18.28■□□□□ 0.52
HDLBP-230ENST00000462130 FGD5Q6ZNL6 1462 aa18.27■□□□□ 0.52
HDLBP-230ENST00000462130 WDR97A6NE52 1622 aa18.24■□□□□ 0.51
HDLBP-230ENST00000462130 CUX1P39880 1505 aa18.23■□□□□ 0.51
HDLBP-230ENST00000462130 SNAPC4Q5SXM2 1469 aa18.21■□□□□ 0.51
HDLBP-230ENST00000462130 CHMP7Q8WUX9 453 aaPredicted RBP18.18■□□□□ 0.5
HDLBP-230ENST00000462130 ARAP1Q96P48 1450 aa18.18■□□□□ 0.5
HDLBP-230ENST00000462130 GRIN2BQ13224 1484 aa18.16■□□□□ 0.5
HDLBP-230ENST00000462130 MAGI1Q96QZ7 1491 aaPredicted RBP18.16■□□□□ 0.5
HDLBP-230ENST00000462130 SUPT5HO00267 1087 aaKnown RBP18.16■□□□□ 0.5
HDLBP-230ENST00000462130 SYNJ1O43426 1573 aa18.15■□□□□ 0.5
HDLBP-230ENST00000462130 PBRM1Q86U86 1689 aa18.15■□□□□ 0.5
HDLBP-230ENST00000462130 TRHP20396 242 aaPredicted RBP18.13■□□□□ 0.49
HDLBP-230ENST00000462130 CLASP1Q7Z460 1538 aa18.12■□□□□ 0.49
HDLBP-230ENST00000462130 SYNJ2O15056 1496 aa18.1■□□□□ 0.49
HDLBP-230ENST00000462130 GAPVD1Q14C86 1478 aa18.09■□□□□ 0.49
HDLBP-230ENST00000462130 ABCA10Q8WWZ4 1543 aa18.05■□□□□ 0.48
HDLBP-230ENST00000462130 ABCA5Q8WWZ7 1642 aa18.04■□□□□ 0.48
HDLBP-230ENST00000462130 WRNQ14191 1432 aaPredicted RBP eCLIP17.98■□□□□ 0.47
HDLBP-230ENST00000462130 BIVM-ERCC5R4GMW8 1640 aa17.97■□□□□ 0.47
HDLBP-230ENST00000462130 TOP2BQ02880 1626 aa17.95■□□□□ 0.46
HDLBP-230ENST00000462130 GRIN2AQ12879 1464 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms