RNA–Protein interactions for RNA: ENST00000517790.1

PVT1-205, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 599 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-205ENST00000517790 NISCHQ9Y2I1 1504 aa12.64□□□□□ -0.39
PVT1-205ENST00000517790 CHIC1Q5VXU3 224 aa12.53□□□□□ -0.4
PVT1-205ENST00000517790 ABCC9O60706 1549 aa11.96□□□□□ -0.49
PVT1-205ENST00000517790 AEBP2Q6ZN18 517 aaPredicted RBP11.78□□□□□ -0.52
PVT1-205ENST00000517790 DNAJC5BQ9UF47 199 aa11.63□□□□□ -0.55
PVT1-205ENST00000517790 CCDC180Q9P1Z9 1646 aa11.48□□□□□ -0.57
PVT1-205ENST00000517790 SLC24A1O60721 1099 aa11.26□□□□□ -0.61
PVT1-205ENST00000517790 PHF23Q9BUL5 403 aaPredicted RBP11.15□□□□□ -0.62
PVT1-205ENST00000517790 RB1CC1Q8TDY2 1594 aa11.13□□□□□ -0.63
PVT1-205ENST00000517790 PABPN1Q86U42 306 aaKnown RBP eCLIP11.1□□□□□ -0.63
PVT1-205ENST00000517790 EHMT2Q96KQ7 1210 aa11.03□□□□□ -0.64
PVT1-205ENST00000517790 UNC13AQ9UPW8 1703 aa10.96□□□□□ -0.65
PVT1-205ENST00000517790 NACADO15069 1562 aa10.94□□□□□ -0.66
PVT1-205ENST00000517790 DCAF8L2P0C7V8 631 aa10.9□□□□□ -0.66
PVT1-205ENST00000517790 DNAJC5Q9H3Z4 198 aa10.9□□□□□ -0.66
PVT1-205ENST00000517790 BICRAQ9NZM4 1560 aa10.89□□□□□ -0.67
PVT1-205ENST00000517790 CECR2Q9BXF3 1484 aa10.79□□□□□ -0.68
PVT1-205ENST00000517790 CC2D2AQ9P2K1 1620 aa10.76□□□□□ -0.69
PVT1-205ENST00000517790 EIF4G1Q04637 1599 aaKnown RBP10.62□□□□□ -0.71
PVT1-205ENST00000517790 PLPPR3Q6T4P5 718 aa10.62□□□□□ -0.71
PVT1-205ENST00000517790 MYO15BQ96JP2 1530 aa10.62□□□□□ -0.71
PVT1-205ENST00000517790 SHROOM4Q9ULL8 1493 aa10.56□□□□□ -0.72
PVT1-205ENST00000517790 SCRIBQ14160 1630 aa10.51□□□□□ -0.73
PVT1-205ENST00000517790 CSRNP3Q8WYN3 585 aa10.49□□□□□ -0.73
PVT1-205ENST00000517790 KCNA4P22459 653 aa10.47□□□□□ -0.73
PVT1-205ENST00000517790 RTN4Q9NQC3 1192 aaKnown RBP10.43□□□□□ -0.74
PVT1-205ENST00000517790 AMER1Q5JTC6 1135 aaPredicted RBP10.41□□□□□ -0.74
PVT1-205ENST00000517790 CUX2O14529 1486 aa10.38□□□□□ -0.75
PVT1-205ENST00000517790 ZCCHC6Q5VYS8 1495 aaKnown RBP10.38□□□□□ -0.75
PVT1-205ENST00000517790 DCAF1Q9Y4B6 1507 aa10.35□□□□□ -0.75
PVT1-205ENST00000517790 ERCC6Q03468 1493 aa10.31□□□□□ -0.76
PVT1-205ENST00000517790 TRIM41Q8WV44 630 aa10.31□□□□□ -0.76
PVT1-205ENST00000517790 NESP48681 1621 aa10.18□□□□□ -0.78
PVT1-205ENST00000517790 NCBP3Q53F19 620 aaKnown RBP10.15□□□□□ -0.78
PVT1-205ENST00000517790 SLC4A1APQ9BWU0 796 aaKnown RBP10.15□□□□□ -0.78
PVT1-205ENST00000517790 NCAPD3P42695 1498 aa10.12□□□□□ -0.79
PVT1-205ENST00000517790 THOC2Q8NI27 1593 aaKnown RBP10.1□□□□□ -0.79
PVT1-205ENST00000517790 ATAD2BQ9ULI0 1458 aa10.06□□□□□ -0.8
PVT1-205ENST00000517790 SMARCA2P51531 1590 aa10.05□□□□□ -0.8
PVT1-205ENST00000517790 KIF21AQ7Z4S6 1674 aa10.02□□□□□ -0.81
PVT1-205ENST00000517790 HMGXB3Q12766 1538 aa10□□□□□ -0.81
PVT1-205ENST00000517790 LAMC3Q9Y6N6 1575 aa9.95□□□□□ -0.82
PVT1-205ENST00000517790 SMARCA4P51532 1647 aa9.95□□□□□ -0.82
PVT1-205ENST00000517790 BAZ1BQ9UIG0 1483 aaKnown RBP9.93□□□□□ -0.82
PVT1-205ENST00000517790 BAZ1AQ9NRL2 1556 aaPredicted RBP9.92□□□□□ -0.82
PVT1-205ENST00000517790 DAXXQ9UER7 740 aaPredicted RBP9.92□□□□□ -0.82
PVT1-205ENST00000517790 ADRA2BP18089 450 aa9.91□□□□□ -0.82
PVT1-205ENST00000517790 PDS5BQ9NTI5 1447 aa9.9□□□□□ -0.83
PVT1-205ENST00000517790 OSCARQ8IYS5 282 aa9.88□□□□□ -0.83
PVT1-205ENST00000517790 MRC2Q9UBG0 1479 aa9.86□□□□□ -0.83
PVT1-205ENST00000517790 WDR62O43379 1518 aa9.85□□□□□ -0.83
PVT1-205ENST00000517790 RIMBP3CA6NJZ7 1639 aa9.84□□□□□ -0.83
PVT1-205ENST00000517790 RIMBP3BA6NNM3 1639 aa9.84□□□□□ -0.83
PVT1-205ENST00000517790 RIMBP3Q9UFD9 1639 aa9.84□□□□□ -0.83
PVT1-205ENST00000517790 PEG3Q9GZU2 1588 aa9.82□□□□□ -0.84
PVT1-205ENST00000517790 CADPSQ9ULU8 1353 aa9.8□□□□□ -0.84
PVT1-205ENST00000517790 SENP3Q9H4L4 574 aaPredicted RBP9.8□□□□□ -0.84
PVT1-205ENST00000517790 MROH2BQ7Z745 1585 aa9.77□□□□□ -0.85
PVT1-205ENST00000517790 CEP164Q9UPV0 1460 aa9.74□□□□□ -0.85
PVT1-205ENST00000517790 ARHGEF11O15085 1522 aa9.74□□□□□ -0.85
PVT1-205ENST00000517790 TRHP20396 242 aaPredicted RBP9.74□□□□□ -0.85
PVT1-205ENST00000517790 CYB5RLQ6IPT4 315 aa9.72□□□□□ -0.85
PVT1-205ENST00000517790 FANCD2Q9BXW9 1451 aa9.72□□□□□ -0.85
PVT1-205ENST00000517790 PRKCSHP14314 528 aaPredicted RBP9.71□□□□□ -0.86
PVT1-205ENST00000517790 URB2Q14146 1524 aaKnown RBP9.69□□□□□ -0.86
PVT1-205ENST00000517790 ZBTB22O15209 634 aa9.68□□□□□ -0.86
PVT1-205ENST00000517790 ZNF608Q9ULD9 1512 aaPredicted RBP9.66□□□□□ -0.86
PVT1-205ENST00000517790 WIZO95785 1651 aa9.64□□□□□ -0.87
PVT1-205ENST00000517790 ARAP1Q96P48 1450 aa9.64□□□□□ -0.87
PVT1-205ENST00000517790 BCANQ96GW7 911 aa9.61□□□□□ -0.87
PVT1-205ENST00000517790 ARXQ96QS3 562 aa9.61□□□□□ -0.87
PVT1-205ENST00000517790 TAOK2Q9UL54 1235 aa9.61□□□□□ -0.87
PVT1-205ENST00000517790 CFTRP13569 1480 aa9.6□□□□□ -0.87
PVT1-205ENST00000517790 CHD1O14646 1710 aa9.58□□□□□ -0.88
PVT1-205ENST00000517790 IFT140Q96RY7 1462 aa9.55□□□□□ -0.88
PVT1-205ENST00000517790 EIF4G3O43432 1585 aaKnown RBP9.54□□□□□ -0.88
PVT1-205ENST00000517790 PLCB2Q00722 1185 aa9.53□□□□□ -0.88
PVT1-205ENST00000517790 FBLN2P98095 1184 aa9.52□□□□□ -0.89
PVT1-205ENST00000517790 RSF1Q96T23 1441 aaPredicted RBP9.5□□□□□ -0.89
PVT1-205ENST00000517790 AQRO60306 1485 aaKnown RBP eCLIP9.5□□□□□ -0.89
PVT1-205ENST00000517790 PPP4R3CPQ6ZMV5 832 aa9.49□□□□□ -0.89
PVT1-205ENST00000517790 TOPBP1Q92547 1522 aa9.49□□□□□ -0.89
PVT1-205ENST00000517790 PRDM2Q13029 1718 aa9.48□□□□□ -0.89
PVT1-205ENST00000517790 PPP6R1Q9UPN7 881 aa9.48□□□□□ -0.89
PVT1-205ENST00000517790 TIMELESSQ9UNS1 1208 aa9.45□□□□□ -0.9
PVT1-205ENST00000517790 TOP2AP11388 1531 aaKnown RBP9.44□□□□□ -0.9
PVT1-205ENST00000517790 TARBP1Q13395 1621 aaKnown RBP9.44□□□□□ -0.9
PVT1-205ENST00000517790 NPM3O75607 178 aaKnown RBP9.42□□□□□ -0.9
PVT1-205ENST00000517790 CLASP1Q7Z460 1538 aa9.41□□□□□ -0.9
PVT1-205ENST00000517790 ILDR1Q86SU0 546 aaPredicted RBP9.41□□□□□ -0.9
PVT1-205ENST00000517790 DNMBPQ6XZF7 1577 aa9.4□□□□□ -0.9
PVT1-205ENST00000517790 TPRNQ4KMQ1 711 aa9.39□□□□□ -0.91
PVT1-205ENST00000517790 TDRD9Q8NDG6 1382 aaKnown RBP9.38□□□□□ -0.91
PVT1-205ENST00000517790 RAD54L2Q9Y4B4 1467 aa9.38□□□□□ -0.91
PVT1-205ENST00000517790 CCDC88BA6NC98 1476 aa9.37□□□□□ -0.91
PVT1-205ENST00000517790 SNAPC4Q5SXM2 1469 aa9.37□□□□□ -0.91
PVT1-205ENST00000517790 FKBP8Q14318 412 aa9.37□□□□□ -0.91
PVT1-205ENST00000517790 ABCC8Q09428 1581 aa9.37□□□□□ -0.91
PVT1-205ENST00000517790 POLA1P09884 1462 aaPredicted RBP9.36□□□□□ -0.91
PVT1-205ENST00000517790 HAP1P54257 671 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms