RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 NISCHQ9Y2I1 1504 aa13.84□□□□□ -0.19
PUM1-207ENST00000440538 DCAF8L2P0C7V8 631 aa12.3□□□□□ -0.44
PUM1-207ENST00000440538 ABCC9O60706 1549 aa12.01□□□□□ -0.49
PUM1-207ENST00000440538 CCDC180Q9P1Z9 1646 aa11.88□□□□□ -0.51
PUM1-207ENST00000440538 SHROOM4Q9ULL8 1493 aa11.79□□□□□ -0.52
PUM1-207ENST00000440538 ZCCHC6Q5VYS8 1495 aaKnown RBP11.53□□□□□ -0.56
PUM1-207ENST00000440538 PABPN1Q86U42 306 aaKnown RBP eCLIP11.48□□□□□ -0.57
PUM1-207ENST00000440538 SCRIBQ14160 1630 aa11.34□□□□□ -0.59
PUM1-207ENST00000440538 SUPT5HO00267 1087 aaKnown RBP11.29□□□□□ -0.6
PUM1-207ENST00000440538 RB1CC1Q8TDY2 1594 aa11.28□□□□□ -0.6
PUM1-207ENST00000440538 NACADO15069 1562 aa11.25□□□□□ -0.61
PUM1-207ENST00000440538 DCAF1Q9Y4B6 1507 aa11.17□□□□□ -0.62
PUM1-207ENST00000440538 MYO15BQ96JP2 1530 aa11.05□□□□□ -0.64
PUM1-207ENST00000440538 CECR2Q9BXF3 1484 aa10.97□□□□□ -0.65
PUM1-207ENST00000440538 UNC13AQ9UPW8 1703 aa10.94□□□□□ -0.66
PUM1-207ENST00000440538 BICRAQ9NZM4 1560 aa10.91□□□□□ -0.66
PUM1-207ENST00000440538 DNAJC5BQ9UF47 199 aa10.85□□□□□ -0.67
PUM1-207ENST00000440538 MROH2BQ7Z745 1585 aa10.8□□□□□ -0.68
PUM1-207ENST00000440538 RSF1Q96T23 1441 aaPredicted RBP10.78□□□□□ -0.68
PUM1-207ENST00000440538 WIZO95785 1651 aa10.69□□□□□ -0.7
PUM1-207ENST00000440538 EIF4G1Q04637 1599 aaKnown RBP10.69□□□□□ -0.7
PUM1-207ENST00000440538 BAZ1AQ9NRL2 1556 aaPredicted RBP10.68□□□□□ -0.7
PUM1-207ENST00000440538 SMARCA4P51532 1647 aa10.65□□□□□ -0.7
PUM1-207ENST00000440538 EHMT2Q96KQ7 1210 aa10.63□□□□□ -0.71
PUM1-207ENST00000440538 CC2D2AQ9P2K1 1620 aa10.62□□□□□ -0.71
PUM1-207ENST00000440538 BAZ1BQ9UIG0 1483 aaKnown RBP10.61□□□□□ -0.71
PUM1-207ENST00000440538 ATAD2BQ9ULI0 1458 aa10.61□□□□□ -0.71
PUM1-207ENST00000440538 FAM9AQ8IZU1 332 aaPredicted RBP10.54□□□□□ -0.72
PUM1-207ENST00000440538 SMARCA2P51531 1590 aa10.5□□□□□ -0.73
PUM1-207ENST00000440538 CCDC88BA6NC98 1476 aa10.49□□□□□ -0.73
PUM1-207ENST00000440538 TRIM41Q8WV44 630 aa10.46□□□□□ -0.73
PUM1-207ENST00000440538 NCAPD3P42695 1498 aa10.46□□□□□ -0.74
PUM1-207ENST00000440538 TOP2AP11388 1531 aaKnown RBP10.44□□□□□ -0.74
PUM1-207ENST00000440538 NESP48681 1621 aa10.43□□□□□ -0.74
PUM1-207ENST00000440538 CHIC1Q5VXU3 224 aa10.42□□□□□ -0.74
PUM1-207ENST00000440538 RANGAP1P46060 587 aaPredicted RBP10.33□□□□□ -0.76
PUM1-207ENST00000440538 CADPSQ9ULU8 1353 aa10.33□□□□□ -0.76
PUM1-207ENST00000440538 HMGXB3Q12766 1538 aa10.33□□□□□ -0.76
PUM1-207ENST00000440538 PEG3Q9GZU2 1588 aa10.32□□□□□ -0.76
PUM1-207ENST00000440538 ABCC8Q09428 1581 aa10.31□□□□□ -0.76
PUM1-207ENST00000440538 ERCC6Q03468 1493 aa10.31□□□□□ -0.76
PUM1-207ENST00000440538 LOC105371045A0A1W2PR82 267 aa10.25□□□□□ -0.77
PUM1-207ENST00000440538 FANCD2Q9BXW9 1451 aa10.23□□□□□ -0.77
PUM1-207ENST00000440538 CFTRP13569 1480 aa10.21□□□□□ -0.78
PUM1-207ENST00000440538 WRNQ14191 1432 aaPredicted RBP eCLIP10.2□□□□□ -0.781e-10■□□□□ 9.9
PUM1-207ENST00000440538 PDS5BQ9NTI5 1447 aa10.2□□□□□ -0.78
PUM1-207ENST00000440538 FBLN2P98095 1184 aa10.2□□□□□ -0.78
PUM1-207ENST00000440538 PPARGC1BQ86YN6 1023 aaKnown RBP10.18□□□□□ -0.78
PUM1-207ENST00000440538 CEP164Q9UPV0 1460 aa10.17□□□□□ -0.78
PUM1-207ENST00000440538 HRCP23327 699 aa10.16□□□□□ -0.78
PUM1-207ENST00000440538 TTBK1Q5TCY1 1321 aaPredicted RBP10.16□□□□□ -0.78
PUM1-207ENST00000440538 UBTFP17480 764 aaKnown RBP10.14□□□□□ -0.79
PUM1-207ENST00000440538 TDRD9Q8NDG6 1382 aaKnown RBP10.13□□□□□ -0.79
PUM1-207ENST00000440538 SOGA1O94964 1423 aa10.12□□□□□ -0.79
PUM1-207ENST00000440538 RAD54L2Q9Y4B4 1467 aa10.11□□□□□ -0.79
PUM1-207ENST00000440538 PCGF6Q9BYE7 350 aa10.11□□□□□ -0.79
PUM1-207ENST00000440538 RUSC2Q8N2Y8 1516 aa10.09□□□□□ -0.79
PUM1-207ENST00000440538 LAMC3Q9Y6N6 1575 aa10.09□□□□□ -0.79
PUM1-207ENST00000440538 SYNJ1O43426 1573 aa10.08□□□□□ -0.8
PUM1-207ENST00000440538 KIF21AQ7Z4S6 1674 aa10.07□□□□□ -0.8
PUM1-207ENST00000440538 CUX1P39880 1505 aa10.07□□□□□ -0.8
PUM1-207ENST00000440538 URB2Q14146 1524 aaKnown RBP10.07□□□□□ -0.8
PUM1-207ENST00000440538 FGD5Q6ZNL6 1462 aa10.06□□□□□ -0.8
PUM1-207ENST00000440538 CSRNP3Q8WYN3 585 aa10.05□□□□□ -0.8
PUM1-207ENST00000440538 CUX2O14529 1486 aa10.05□□□□□ -0.8
PUM1-207ENST00000440538 TOPBP1Q92547 1522 aa10.04□□□□□ -0.8
PUM1-207ENST00000440538 AQRO60306 1485 aaKnown RBP eCLIP10.04□□□□□ -0.87e-7■■■■■ 33.4
PUM1-207ENST00000440538 MRC2Q9UBG0 1479 aa10.03□□□□□ -0.8
PUM1-207ENST00000440538 P3H3Q8IVL6 736 aa10.02□□□□□ -0.81
PUM1-207ENST00000440538 POLA1P09884 1462 aaPredicted RBP10.01□□□□□ -0.81
PUM1-207ENST00000440538 ATP1B4Q9UN42 357 aaPredicted RBP10.01□□□□□ -0.81
PUM1-207ENST00000440538 CHMP7Q8WUX9 453 aaPredicted RBP9.99□□□□□ -0.81
PUM1-207ENST00000440538 ZNF608Q9ULD9 1512 aaPredicted RBP9.98□□□□□ -0.81
PUM1-207ENST00000440538 ARID3CA6NKF2 412 aa9.96□□□□□ -0.81
PUM1-207ENST00000440538 KIF27Q86VH2 1401 aa9.95□□□□□ -0.82
PUM1-207ENST00000440538 DNMBPQ6XZF7 1577 aa9.95□□□□□ -0.82
PUM1-207ENST00000440538 TOP2BQ02880 1626 aa9.94□□□□□ -0.82
PUM1-207ENST00000440538 CARMIL1Q5VZK9 1371 aa9.9□□□□□ -0.82
PUM1-207ENST00000440538 GAPVD1Q14C86 1478 aa9.9□□□□□ -0.83
PUM1-207ENST00000440538 IGF1RP08069 1367 aa9.89□□□□□ -0.83
PUM1-207ENST00000440538 RAPGEF2Q9Y4G8 1499 aa9.86□□□□□ -0.83
PUM1-207ENST00000440538 THOC2Q8NI27 1593 aaKnown RBP9.86□□□□□ -0.83
PUM1-207ENST00000440538 PRDM2Q13029 1718 aa9.86□□□□□ -0.83
PUM1-207ENST00000440538 WDR62O43379 1518 aa9.86□□□□□ -0.83
PUM1-207ENST00000440538 IFT140Q96RY7 1462 aa9.85□□□□□ -0.83
PUM1-207ENST00000440538 BIVM-ERCC5R4GMW8 1640 aa9.84□□□□□ -0.83
PUM1-207ENST00000440538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.84□□□□□ -0.83
PUM1-207ENST00000440538 HNRNPUL2Q1KMD3 747 aaKnown RBP9.84□□□□□ -0.83
PUM1-207ENST00000440538 SNAPC4Q5SXM2 1469 aa9.83□□□□□ -0.84
PUM1-207ENST00000440538 ABCA10Q8WWZ4 1543 aa9.82□□□□□ -0.84
PUM1-207ENST00000440538 GRIN2BQ13224 1484 aa9.79□□□□□ -0.84
PUM1-207ENST00000440538 EEA1Q15075 1411 aa9.78□□□□□ -0.84
PUM1-207ENST00000440538 GOLGA3Q08378 1498 aa9.77□□□□□ -0.84
PUM1-207ENST00000440538 TARBP1Q13395 1621 aaKnown RBP9.77□□□□□ -0.85
PUM1-207ENST00000440538 EIF4G3O43432 1585 aaKnown RBP9.77□□□□□ -0.85
PUM1-207ENST00000440538 APLP2Q06481 763 aa9.76□□□□□ -0.85
PUM1-207ENST00000440538 OSCARQ8IYS5 282 aa9.76□□□□□ -0.85
PUM1-207ENST00000440538 JPH4Q96JJ6 628 aa9.75□□□□□ -0.85
PUM1-207ENST00000440538 CEP162Q5TB80 1403 aa9.73□□□□□ -0.85
PUM1-207ENST00000440538 FHAD1B1AJZ9 1412 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms