RNA–Protein interactions for RNA: ENST00000425989.5

HDLBP-211, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-211ENST00000425989 NISCHQ9Y2I1 1504 aa21.86■■□□□ 1.09
HDLBP-211ENST00000425989 CCDC180Q9P1Z9 1646 aa19.16■□□□□ 0.66
HDLBP-211ENST00000425989 ZCCHC6Q5VYS8 1495 aaKnown RBP18.29■□□□□ 0.52
HDLBP-211ENST00000425989 DCAF1Q9Y4B6 1507 aa18.18■□□□□ 0.5
HDLBP-211ENST00000425989 ABCC9O60706 1549 aa18.06■□□□□ 0.48
HDLBP-211ENST00000425989 MYO15BQ96JP2 1530 aa18.06■□□□□ 0.48
HDLBP-211ENST00000425989 DCAF8L2P0C7V8 631 aa18.05■□□□□ 0.48
HDLBP-211ENST00000425989 NACADO15069 1562 aa17.91■□□□□ 0.46
HDLBP-211ENST00000425989 RB1CC1Q8TDY2 1594 aa17.75■□□□□ 0.43
HDLBP-211ENST00000425989 SHROOM4Q9ULL8 1493 aa17.54■□□□□ 0.4
HDLBP-211ENST00000425989 SCRIBQ14160 1630 aa17.42■□□□□ 0.38
HDLBP-211ENST00000425989 UNC13AQ9UPW8 1703 aa17.27■□□□□ 0.35
HDLBP-211ENST00000425989 BICRAQ9NZM4 1560 aa17.1■□□□□ 0.33
HDLBP-211ENST00000425989 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
HDLBP-211ENST00000425989 SUPT5HO00267 1087 aaKnown RBP16.95■□□□□ 0.3
HDLBP-211ENST00000425989 BAZ1AQ9NRL2 1556 aaPredicted RBP16.92■□□□□ 0.3
HDLBP-211ENST00000425989 RSF1Q96T23 1441 aaPredicted RBP16.88■□□□□ 0.29
HDLBP-211ENST00000425989 CECR2Q9BXF3 1484 aa16.88■□□□□ 0.29
HDLBP-211ENST00000425989 MROH2BQ7Z745 1585 aa16.79■□□□□ 0.28
HDLBP-211ENST00000425989 SMARCA4P51532 1647 aa16.78■□□□□ 0.28
HDLBP-211ENST00000425989 DNAJC5BQ9UF47 199 aa16.77■□□□□ 0.28
HDLBP-211ENST00000425989 PEG3Q9GZU2 1588 aa16.67■□□□□ 0.26
HDLBP-211ENST00000425989 WIZO95785 1651 aa16.64■□□□□ 0.25
HDLBP-211ENST00000425989 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
HDLBP-211ENST00000425989 EIF4G1Q04637 1599 aaKnown RBP16.62■□□□□ 0.25
HDLBP-211ENST00000425989 ATAD2BQ9ULI0 1458 aa16.57■□□□□ 0.24
HDLBP-211ENST00000425989 TOP2AP11388 1531 aaKnown RBP16.54■□□□□ 0.24
HDLBP-211ENST00000425989 NCAPD3P42695 1498 aa16.53■□□□□ 0.24
HDLBP-211ENST00000425989 BAZ1BQ9UIG0 1483 aaKnown RBP16.46■□□□□ 0.23
HDLBP-211ENST00000425989 HMGXB3Q12766 1538 aa16.45■□□□□ 0.22
HDLBP-211ENST00000425989 CC2D2AQ9P2K1 1620 aa16.39■□□□□ 0.21
HDLBP-211ENST00000425989 CCDC88BA6NC98 1476 aa16.36■□□□□ 0.21
HDLBP-211ENST00000425989 CHIC1Q5VXU3 224 aa16.23■□□□□ 0.19
HDLBP-211ENST00000425989 CADPSQ9ULU8 1353 aa16.08■□□□□ 0.16
HDLBP-211ENST00000425989 CFTRP13569 1480 aa16.08■□□□□ 0.16
HDLBP-211ENST00000425989 TRIM41Q8WV44 630 aa16.06■□□□□ 0.16
HDLBP-211ENST00000425989 PRDM2Q13029 1718 aa15.99■□□□□ 0.15
HDLBP-211ENST00000425989 LAMC3Q9Y6N6 1575 aa15.96■□□□□ 0.15
HDLBP-211ENST00000425989 WRNQ14191 1432 aaPredicted RBP eCLIP15.92■□□□□ 0.14
HDLBP-211ENST00000425989 PDS5BQ9NTI5 1447 aa15.89■□□□□ 0.13
HDLBP-211ENST00000425989 ABCC8Q09428 1581 aa15.85■□□□□ 0.13
HDLBP-211ENST00000425989 FANCD2Q9BXW9 1451 aa15.83■□□□□ 0.12
HDLBP-211ENST00000425989 TOP2BQ02880 1626 aa15.8■□□□□ 0.12
HDLBP-211ENST00000425989 NESP48681 1621 aa15.79■□□□□ 0.12
HDLBP-211ENST00000425989 BIVM-ERCC5R4GMW8 1640 aa15.78■□□□□ 0.12
HDLBP-211ENST00000425989 EEA1Q15075 1411 aa15.77■□□□□ 0.11
HDLBP-211ENST00000425989 CEP164Q9UPV0 1460 aa15.75■□□□□ 0.11
HDLBP-211ENST00000425989 SYNJ1O43426 1573 aa15.74■□□□□ 0.11
HDLBP-211ENST00000425989 DNAJC5Q9H3Z4 198 aa15.73■□□□□ 0.11
HDLBP-211ENST00000425989 CUX1P39880 1505 aa15.71■□□□□ 0.11
HDLBP-211ENST00000425989 DNMBPQ6XZF7 1577 aa15.68■□□□□ 0.1
HDLBP-211ENST00000425989 CSRNP3Q8WYN3 585 aa15.65■□□□□ 0.1
HDLBP-211ENST00000425989 TOPBP1Q92547 1522 aa15.64■□□□□ 0.09
HDLBP-211ENST00000425989 KIF21AQ7Z4S6 1674 aa15.63■□□□□ 0.09
HDLBP-211ENST00000425989 SOGA1O94964 1423 aa15.6■□□□□ 0.09
HDLBP-211ENST00000425989 MRC2Q9UBG0 1479 aa15.59■□□□□ 0.09
HDLBP-211ENST00000425989 FAM9AQ8IZU1 332 aaPredicted RBP15.59■□□□□ 0.09
HDLBP-211ENST00000425989 KIF27Q86VH2 1401 aa15.59■□□□□ 0.09
HDLBP-211ENST00000425989 URB2Q14146 1524 aaKnown RBP15.58■□□□□ 0.09
HDLBP-211ENST00000425989 ERCC6Q03468 1493 aa15.58■□□□□ 0.08
HDLBP-211ENST00000425989 FGD5Q6ZNL6 1462 aa15.58■□□□□ 0.08
HDLBP-211ENST00000425989 POLA1P09884 1462 aaPredicted RBP15.53■□□□□ 0.08
HDLBP-211ENST00000425989 LOC105371045A0A1W2PR82 267 aa15.53■□□□□ 0.08
HDLBP-211ENST00000425989 ABCA10Q8WWZ4 1543 aa15.52■□□□□ 0.07
HDLBP-211ENST00000425989 WDR62O43379 1518 aa15.5■□□□□ 0.07
HDLBP-211ENST00000425989 RUSC2Q8N2Y8 1516 aa15.5■□□□□ 0.07
HDLBP-211ENST00000425989 CUX2O14529 1486 aa15.47■□□□□ 0.07
HDLBP-211ENST00000425989 IGF1RP08069 1367 aa15.44■□□□□ 0.06
HDLBP-211ENST00000425989 IFT140Q96RY7 1462 aa15.44■□□□□ 0.06
HDLBP-211ENST00000425989 KIF21BO75037 1637 aa15.43■□□□□ 0.06
HDLBP-211ENST00000425989 RAD54L2Q9Y4B4 1467 aa15.43■□□□□ 0.06
HDLBP-211ENST00000425989 WDR97A6NE52 1622 aa15.43■□□□□ 0.06
HDLBP-211ENST00000425989 GOLGA3Q08378 1498 aa15.42■□□□□ 0.06
HDLBP-211ENST00000425989 THOC2Q8NI27 1593 aaKnown RBP15.41■□□□□ 0.06
HDLBP-211ENST00000425989 TNIKQ9UKE5 1360 aa15.41■□□□□ 0.06
HDLBP-211ENST00000425989 PRXQ9BXM0 1461 aa15.4■□□□□ 0.06
HDLBP-211ENST00000425989 TARBP1Q13395 1621 aaKnown RBP15.4■□□□□ 0.06
HDLBP-211ENST00000425989 ERICH3Q5RHP9 1530 aa15.39■□□□□ 0.05
HDLBP-211ENST00000425989 UBTFP17480 764 aaKnown RBP15.39■□□□□ 0.05
HDLBP-211ENST00000425989 CARMIL1Q5VZK9 1371 aa15.36■□□□□ 0.05
HDLBP-211ENST00000425989 GAPVD1Q14C86 1478 aa15.36■□□□□ 0.05
HDLBP-211ENST00000425989 TDRD9Q8NDG6 1382 aaKnown RBP15.34■□□□□ 0.05
HDLBP-211ENST00000425989 ABCA5Q8WWZ7 1642 aa15.33■□□□□ 0.04
HDLBP-211ENST00000425989 RAPGEF2Q9Y4G8 1499 aa15.33■□□□□ 0.04
HDLBP-211ENST00000425989 CUL7Q14999 1698 aa15.32■□□□□ 0.04
HDLBP-211ENST00000425989 GRIN2BQ13224 1484 aa15.28■□□□□ 0.04
HDLBP-211ENST00000425989 EHMT2Q96KQ7 1210 aa15.26■□□□□ 0.03
HDLBP-211ENST00000425989 AQRO60306 1485 aaKnown RBP eCLIP15.25■□□□□ 0.032e-7■■■■□ 25.9
HDLBP-211ENST00000425989 FHAD1B1AJZ9 1412 aa15.24■□□□□ 0.03
HDLBP-211ENST00000425989 PBRM1Q86U86 1689 aa15.22■□□□□ 0.03
HDLBP-211ENST00000425989 CEP162Q5TB80 1403 aa15.2■□□□□ 0.02
HDLBP-211ENST00000425989 ZNF608Q9ULD9 1512 aaPredicted RBP15.2■□□□□ 0.02
HDLBP-211ENST00000425989 MAGI1Q96QZ7 1491 aaPredicted RBP15.19■□□□□ 0.02
HDLBP-211ENST00000425989 EIF4G3O43432 1585 aaKnown RBP15.16■□□□□ 0.02
HDLBP-211ENST00000425989 CLIP1P30622 1438 aa15.15■□□□□ 0.02
HDLBP-211ENST00000425989 CHMP7Q8WUX9 453 aaPredicted RBP15.12■□□□□ 0.01
HDLBP-211ENST00000425989 ADAMTS12P58397 1594 aa15.11■□□□□ 0.01
HDLBP-211ENST00000425989 SYNJ2O15056 1496 aa15.1■□□□□ 0.01
HDLBP-211ENST00000425989 SNAPC4Q5SXM2 1469 aa15.09■□□□□ 0.01
HDLBP-211ENST00000425989 CTTNBP2Q8WZ74 1663 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms