RNA–Protein interactions for RNA: ENST00000423693.5

HDLBP-210, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-210ENST00000423693 NISCHQ9Y2I1 1504 aa31.08■■■□□ 2.57
HDLBP-210ENST00000423693 CCDC180Q9P1Z9 1646 aa27.56■■■□□ 2
HDLBP-210ENST00000423693 ABCC9O60706 1549 aa26.75■■□□□ 1.87
HDLBP-210ENST00000423693 ZCCHC6Q5VYS8 1495 aaKnown RBP25.92■■□□□ 1.74
HDLBP-210ENST00000423693 NACADO15069 1562 aa25.91■■□□□ 1.74
HDLBP-210ENST00000423693 DCAF8L2P0C7V8 631 aa25.88■■□□□ 1.73
HDLBP-210ENST00000423693 RB1CC1Q8TDY2 1594 aa25.87■■□□□ 1.73
HDLBP-210ENST00000423693 MYO15BQ96JP2 1530 aa25.86■■□□□ 1.73
HDLBP-210ENST00000423693 DCAF1Q9Y4B6 1507 aa25.78■■□□□ 1.72
HDLBP-210ENST00000423693 UNC13AQ9UPW8 1703 aa25.17■■□□□ 1.62
HDLBP-210ENST00000423693 SCRIBQ14160 1630 aa25.08■■□□□ 1.61
HDLBP-210ENST00000423693 PABPN1Q86U42 306 aaKnown RBP eCLIP25.04■■□□□ 1.6
HDLBP-210ENST00000423693 BICRAQ9NZM4 1560 aa25.03■■□□□ 1.6
HDLBP-210ENST00000423693 SHROOM4Q9ULL8 1493 aa24.91■■□□□ 1.58
HDLBP-210ENST00000423693 DNAJC5BQ9UF47 199 aa24.41■■□□□ 1.5
HDLBP-210ENST00000423693 EIF4G1Q04637 1599 aaKnown RBP24.37■■□□□ 1.49
HDLBP-210ENST00000423693 CC2D2AQ9P2K1 1620 aa24.22■■□□□ 1.47
HDLBP-210ENST00000423693 CECR2Q9BXF3 1484 aa24.15■■□□□ 1.46
HDLBP-210ENST00000423693 BAZ1AQ9NRL2 1556 aaPredicted RBP24.09■■□□□ 1.45
HDLBP-210ENST00000423693 SMARCA4P51532 1647 aa24.06■■□□□ 1.44
HDLBP-210ENST00000423693 NCAPD3P42695 1498 aa23.92■■□□□ 1.42
HDLBP-210ENST00000423693 ATAD2BQ9ULI0 1458 aa23.92■■□□□ 1.42
HDLBP-210ENST00000423693 SMARCA2P51531 1590 aa23.91■■□□□ 1.42
HDLBP-210ENST00000423693 MROH2BQ7Z745 1585 aa23.91■■□□□ 1.42
HDLBP-210ENST00000423693 PEG3Q9GZU2 1588 aa23.87■■□□□ 1.41
HDLBP-210ENST00000423693 HMGXB3Q12766 1538 aa23.79■■□□□ 1.4
HDLBP-210ENST00000423693 RSF1Q96T23 1441 aaPredicted RBP23.75■■□□□ 1.39
HDLBP-210ENST00000423693 BAZ1BQ9UIG0 1483 aaKnown RBP23.72■■□□□ 1.39
HDLBP-210ENST00000423693 WIZO95785 1651 aa23.64■■□□□ 1.38
HDLBP-210ENST00000423693 TOP2AP11388 1531 aaKnown RBP23.46■■□□□ 1.35
HDLBP-210ENST00000423693 SUPT5HO00267 1087 aaKnown RBP23.23■■□□□ 1.31
HDLBP-210ENST00000423693 LAMC3Q9Y6N6 1575 aa23.23■■□□□ 1.31
HDLBP-210ENST00000423693 CADPSQ9ULU8 1353 aa23.22■■□□□ 1.31
HDLBP-210ENST00000423693 NESP48681 1621 aa23.19■■□□□ 1.3
HDLBP-210ENST00000423693 CCDC88BA6NC98 1476 aa23.18■■□□□ 1.3
HDLBP-210ENST00000423693 CFTRP13569 1480 aa23.11■■□□□ 1.29
HDLBP-210ENST00000423693 PDS5BQ9NTI5 1447 aa23.1■■□□□ 1.29
HDLBP-210ENST00000423693 ERCC6Q03468 1493 aa23.08■■□□□ 1.29
HDLBP-210ENST00000423693 FANCD2Q9BXW9 1451 aa22.92■■□□□ 1.26
HDLBP-210ENST00000423693 KIF21AQ7Z4S6 1674 aa22.9■■□□□ 1.26
HDLBP-210ENST00000423693 PRDM2Q13029 1718 aa22.88■■□□□ 1.25
HDLBP-210ENST00000423693 CEP164Q9UPV0 1460 aa22.87■■□□□ 1.25
HDLBP-210ENST00000423693 CUX2O14529 1486 aa22.82■■□□□ 1.24
HDLBP-210ENST00000423693 THOC2Q8NI27 1593 aaKnown RBP22.81■■□□□ 1.24
HDLBP-210ENST00000423693 MRC2Q9UBG0 1479 aa22.81■■□□□ 1.24
HDLBP-210ENST00000423693 WDR62O43379 1518 aa22.72■■□□□ 1.23
HDLBP-210ENST00000423693 ABCC8Q09428 1581 aa22.65■■□□□ 1.22
HDLBP-210ENST00000423693 URB2Q14146 1524 aaKnown RBP22.65■■□□□ 1.22
HDLBP-210ENST00000423693 TOPBP1Q92547 1522 aa22.56■■□□□ 1.2
HDLBP-210ENST00000423693 DNMBPQ6XZF7 1577 aa22.55■■□□□ 1.2
HDLBP-210ENST00000423693 CUX1P39880 1505 aa22.42■■□□□ 1.18
HDLBP-210ENST00000423693 IFT140Q96RY7 1462 aa22.42■■□□□ 1.18
HDLBP-210ENST00000423693 WRNQ14191 1432 aaPredicted RBP eCLIP22.4■■□□□ 1.18
HDLBP-210ENST00000423693 POLA1P09884 1462 aaPredicted RBP22.38■■□□□ 1.17
HDLBP-210ENST00000423693 FGD5Q6ZNL6 1462 aa22.34■■□□□ 1.17
HDLBP-210ENST00000423693 SOGA1O94964 1423 aa22.31■■□□□ 1.16
HDLBP-210ENST00000423693 TOP2BQ02880 1626 aa22.31■■□□□ 1.16
HDLBP-210ENST00000423693 TARBP1Q13395 1621 aaKnown RBP22.28■■□□□ 1.16
HDLBP-210ENST00000423693 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
HDLBP-210ENST00000423693 SYNJ1O43426 1573 aa22.26■■□□□ 1.15
HDLBP-210ENST00000423693 RAD54L2Q9Y4B4 1467 aa22.25■■□□□ 1.15
HDLBP-210ENST00000423693 ZNF608Q9ULD9 1512 aaPredicted RBP22.23■■□□□ 1.15
HDLBP-210ENST00000423693 WDR97A6NE52 1622 aa22.2■■□□□ 1.14
HDLBP-210ENST00000423693 ABCA10Q8WWZ4 1543 aa22.17■■□□□ 1.14
HDLBP-210ENST00000423693 AQRO60306 1485 aaKnown RBP eCLIP22.15■■□□□ 1.142e-7■■■■□ 25.9
HDLBP-210ENST00000423693 TDRD9Q8NDG6 1382 aaKnown RBP22.14■■□□□ 1.14
HDLBP-210ENST00000423693 EIF4G3O43432 1585 aaKnown RBP22.14■■□□□ 1.13
HDLBP-210ENST00000423693 GAPVD1Q14C86 1478 aa22.05■■□□□ 1.12
HDLBP-210ENST00000423693 GRIN2BQ13224 1484 aa22.04■■□□□ 1.12
HDLBP-210ENST00000423693 ABCA5Q8WWZ7 1642 aa22.02■■□□□ 1.12
HDLBP-210ENST00000423693 TRIM41Q8WV44 630 aa22■■□□□ 1.11
HDLBP-210ENST00000423693 MAGI1Q96QZ7 1491 aaPredicted RBP21.97■■□□□ 1.11
HDLBP-210ENST00000423693 OSCARQ8IYS5 282 aa21.94■■□□□ 1.1
HDLBP-210ENST00000423693 DNAJC5Q9H3Z4 198 aa21.94■■□□□ 1.1
HDLBP-210ENST00000423693 KIF27Q86VH2 1401 aa21.94■■□□□ 1.1
HDLBP-210ENST00000423693 SNAPC4Q5SXM2 1469 aa21.94■■□□□ 1.1
HDLBP-210ENST00000423693 PBRM1Q86U86 1689 aa21.92■■□□□ 1.1
HDLBP-210ENST00000423693 ERICH3Q5RHP9 1530 aa21.91■■□□□ 1.1
HDLBP-210ENST00000423693 SYNJ2O15056 1496 aa21.88■■□□□ 1.09
HDLBP-210ENST00000423693 CHMP7Q8WUX9 453 aaPredicted RBP21.87■■□□□ 1.09
HDLBP-210ENST00000423693 FBLN2P98095 1184 aa21.86■■□□□ 1.09
HDLBP-210ENST00000423693 FHAD1B1AJZ9 1412 aa21.83■■□□□ 1.09
HDLBP-210ENST00000423693 CHIC1Q5VXU3 224 aa21.82■■□□□ 1.08
HDLBP-210ENST00000423693 IGF1RP08069 1367 aa21.82■■□□□ 1.08
HDLBP-210ENST00000423693 CHD1O14646 1710 aa21.8■■□□□ 1.08
HDLBP-210ENST00000423693 ADAMTS12P58397 1594 aa21.79■■□□□ 1.08
HDLBP-210ENST00000423693 GRIN2AQ12879 1464 aa21.74■■□□□ 1.07
HDLBP-210ENST00000423693 CUL7Q14999 1698 aa21.72■■□□□ 1.07
HDLBP-210ENST00000423693 CARMIL1Q5VZK9 1371 aa21.7■■□□□ 1.06
HDLBP-210ENST00000423693 RUSC2Q8N2Y8 1516 aa21.69■■□□□ 1.06
HDLBP-210ENST00000423693 EEA1Q15075 1411 aa21.66■■□□□ 1.06
HDLBP-210ENST00000423693 NUP160Q12769 1436 aa21.65■■□□□ 1.06
HDLBP-210ENST00000423693 CLASP1Q7Z460 1538 aa21.63■■□□□ 1.05
HDLBP-210ENST00000423693 CSRNP3Q8WYN3 585 aa21.59■■□□□ 1.05
HDLBP-210ENST00000423693 CEP170Q5SW79 1584 aa21.58■■□□□ 1.05
HDLBP-210ENST00000423693 RAPGEF2Q9Y4G8 1499 aa21.58■■□□□ 1.04
HDLBP-210ENST00000423693 PRXQ9BXM0 1461 aa21.54■■□□□ 1.04
HDLBP-210ENST00000423693 ARHGEF11O15085 1522 aa21.5■■□□□ 1.03
HDLBP-210ENST00000423693 KIAA0586Q9BVV6 1533 aa21.5■■□□□ 1.03
HDLBP-210ENST00000423693 JPH4Q96JJ6 628 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms