RNA–Protein interactions for RNA: ENST00000310931.8

HDLBP-201, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-201ENST00000310931 NISCHQ9Y2I1 1504 aa19.94■□□□□ 0.78
HDLBP-201ENST00000310931 CCDC180Q9P1Z9 1646 aa17.59■□□□□ 0.41
HDLBP-201ENST00000310931 ZCCHC6Q5VYS8 1495 aaKnown RBP16.73■□□□□ 0.27
HDLBP-201ENST00000310931 DCAF1Q9Y4B6 1507 aa16.66■□□□□ 0.26
HDLBP-201ENST00000310931 MYO15BQ96JP2 1530 aa16.55■□□□□ 0.24
HDLBP-201ENST00000310931 ABCC9O60706 1549 aa16.48■□□□□ 0.23
HDLBP-201ENST00000310931 DCAF8L2P0C7V8 631 aa16.43■□□□□ 0.22
HDLBP-201ENST00000310931 NACADO15069 1562 aa16.43■□□□□ 0.22
HDLBP-201ENST00000310931 RB1CC1Q8TDY2 1594 aa16.31■□□□□ 0.2
HDLBP-201ENST00000310931 SHROOM4Q9ULL8 1493 aa15.96■□□□□ 0.15
HDLBP-201ENST00000310931 SCRIBQ14160 1630 aa15.93■□□□□ 0.14
HDLBP-201ENST00000310931 PELP1Q8IZL8 1130 aaKnown RBP15.68■□□□□ 0.1
HDLBP-201ENST00000310931 UNC13AQ9UPW8 1703 aa15.63■□□□□ 0.09
HDLBP-201ENST00000310931 MYT1Q01538 1121 aa15.6■□□□□ 0.09
HDLBP-201ENST00000310931 BICRAQ9NZM4 1560 aa15.53■□□□□ 0.08
HDLBP-201ENST00000310931 BAZ1AQ9NRL2 1556 aaPredicted RBP15.51■□□□□ 0.07
HDLBP-201ENST00000310931 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.065e-8■■□□□ 12.5
HDLBP-201ENST00000310931 SUPT5HO00267 1087 aaKnown RBP15.41■□□□□ 0.06
HDLBP-201ENST00000310931 RSF1Q96T23 1441 aaPredicted RBP15.36■□□□□ 0.05
HDLBP-201ENST00000310931 SMARCA4P51532 1647 aa15.35■□□□□ 0.05
HDLBP-201ENST00000310931 CECR2Q9BXF3 1484 aa15.31■□□□□ 0.04
HDLBP-201ENST00000310931 SMARCA2P51531 1590 aa15.28■□□□□ 0.04
HDLBP-201ENST00000310931 MROH2BQ7Z745 1585 aa15.27■□□□□ 0.03
HDLBP-201ENST00000310931 PEG3Q9GZU2 1588 aa15.22■□□□□ 0.03
HDLBP-201ENST00000310931 EIF4G1Q04637 1599 aaKnown RBP15.18■□□□□ 0.02
HDLBP-201ENST00000310931 TOP2AP11388 1531 aaKnown RBP15.17■□□□□ 0.02
HDLBP-201ENST00000310931 ATAD2BQ9ULI0 1458 aa15.12■□□□□ 0.01
HDLBP-201ENST00000310931 WIZO95785 1651 aa15.11■□□□□ 0.01
HDLBP-201ENST00000310931 BAZ1BQ9UIG0 1483 aaKnown RBP15.11■□□□□ 0.01
HDLBP-201ENST00000310931 HMGXB3Q12766 1538 aa15.1■□□□□ 0.01
HDLBP-201ENST00000310931 NCAPD3P42695 1498 aa15.08■□□□□ 0.01
HDLBP-201ENST00000310931 CC2D2AQ9P2K1 1620 aa14.95□□□□□ -0.02
HDLBP-201ENST00000310931 CCDC88BA6NC98 1476 aa14.89□□□□□ -0.03
HDLBP-201ENST00000310931 CENPBP07199 599 aaPredicted RBP14.85□□□□□ -0.03
HDLBP-201ENST00000310931 ERICH6Q7L0X2 663 aa14.84□□□□□ -0.03
HDLBP-201ENST00000310931 PCGF6Q9BYE7 350 aa14.72□□□□□ -0.05
HDLBP-201ENST00000310931 CHIC1Q5VXU3 224 aa14.71□□□□□ -0.05
HDLBP-201ENST00000310931 CADPSQ9ULU8 1353 aa14.68□□□□□ -0.06
HDLBP-201ENST00000310931 CFTRP13569 1480 aa14.68□□□□□ -0.06
HDLBP-201ENST00000310931 TRIM41Q8WV44 630 aa14.67□□□□□ -0.06
HDLBP-201ENST00000310931 LAMC3Q9Y6N6 1575 aa14.64□□□□□ -0.07
HDLBP-201ENST00000310931 PRDM2Q13029 1718 aa14.64□□□□□ -0.07
HDLBP-201ENST00000310931 CCER1Q8TC90 406 aaPredicted RBP14.61□□□□□ -0.07
HDLBP-201ENST00000310931 PDS5BQ9NTI5 1447 aa14.59□□□□□ -0.07
HDLBP-201ENST00000310931 WRNQ14191 1432 aaPredicted RBP eCLIP14.57□□□□□ -0.08
HDLBP-201ENST00000310931 ABCC8Q09428 1581 aa14.56□□□□□ -0.08
HDLBP-201ENST00000310931 EEA1Q15075 1411 aa14.52□□□□□ -0.08
HDLBP-201ENST00000310931 TTBK1Q5TCY1 1321 aaPredicted RBP14.52□□□□□ -0.08
HDLBP-201ENST00000310931 FANCD2Q9BXW9 1451 aa14.49□□□□□ -0.09
HDLBP-201ENST00000310931 CEP164Q9UPV0 1460 aa14.48□□□□□ -0.09
HDLBP-201ENST00000310931 TOP2BQ02880 1626 aa14.44□□□□□ -0.1
HDLBP-201ENST00000310931 BIVM-ERCC5R4GMW8 1640 aa14.43□□□□□ -0.1
HDLBP-201ENST00000310931 ZEB1P37275 1124 aaPredicted RBP14.43□□□□□ -0.1
HDLBP-201ENST00000310931 HRCP23327 699 aa14.4□□□□□ -0.1
HDLBP-201ENST00000310931 DNMBPQ6XZF7 1577 aa14.39□□□□□ -0.11
HDLBP-201ENST00000310931 DNAJC5BQ9UF47 199 aa14.38□□□□□ -0.11
HDLBP-201ENST00000310931 YTHDC1Q96MU7 727 aaKnown RBP14.35□□□□□ -0.11
HDLBP-201ENST00000310931 SYNJ1O43426 1573 aa14.35□□□□□ -0.11
HDLBP-201ENST00000310931 ERCC6Q03468 1493 aa14.34□□□□□ -0.11
HDLBP-201ENST00000310931 MRC2Q9UBG0 1479 aa14.34□□□□□ -0.11
HDLBP-201ENST00000310931 NESP48681 1621 aa14.33□□□□□ -0.11
HDLBP-201ENST00000310931 CUX1P39880 1505 aa14.33□□□□□ -0.12
HDLBP-201ENST00000310931 KIF27Q86VH2 1401 aa14.3□□□□□ -0.12
HDLBP-201ENST00000310931 TOPBP1Q92547 1522 aa14.29□□□□□ -0.12
HDLBP-201ENST00000310931 EHMT2Q96KQ7 1210 aa14.29□□□□□ -0.12
HDLBP-201ENST00000310931 PPARGC1BQ86YN6 1023 aaKnown RBP14.26□□□□□ -0.13
HDLBP-201ENST00000310931 CSRNP3Q8WYN3 585 aa14.25□□□□□ -0.13
HDLBP-201ENST00000310931 FGD5Q6ZNL6 1462 aa14.25□□□□□ -0.13
HDLBP-201ENST00000310931 KIF21AQ7Z4S6 1674 aa14.24□□□□□ -0.13
HDLBP-201ENST00000310931 WDR97A6NE52 1622 aa14.23□□□□□ -0.13
HDLBP-201ENST00000310931 NEFLP07196 543 aa14.22□□□□□ -0.13
HDLBP-201ENST00000310931 SOGA1O94964 1423 aa14.21□□□□□ -0.13
HDLBP-201ENST00000310931 WDR62O43379 1518 aa14.21□□□□□ -0.14
HDLBP-201ENST00000310931 URB2Q14146 1524 aaKnown RBP14.2□□□□□ -0.14
HDLBP-201ENST00000310931 ABCA10Q8WWZ4 1543 aa14.19□□□□□ -0.14
HDLBP-201ENST00000310931 IFT140Q96RY7 1462 aa14.19□□□□□ -0.14
HDLBP-201ENST00000310931 FAM9AQ8IZU1 332 aaPredicted RBP14.18□□□□□ -0.14
HDLBP-201ENST00000310931 POLA1P09884 1462 aaPredicted RBP14.18□□□□□ -0.14
HDLBP-201ENST00000310931 GOLGA3Q08378 1498 aa14.18□□□□□ -0.14
HDLBP-201ENST00000310931 CUX2O14529 1486 aa14.17□□□□□ -0.14
HDLBP-201ENST00000310931 KIF21BO75037 1637 aa14.16□□□□□ -0.14
HDLBP-201ENST00000310931 ERICH3Q5RHP9 1530 aa14.13□□□□□ -0.15
HDLBP-201ENST00000310931 THOC2Q8NI27 1593 aaKnown RBP14.09□□□□□ -0.15
HDLBP-201ENST00000310931 CUL7Q14999 1698 aa14.09□□□□□ -0.15
HDLBP-201ENST00000310931 TNIKQ9UKE5 1360 aa14.09□□□□□ -0.15
HDLBP-201ENST00000310931 UBTFP17480 764 aaKnown RBP14.07□□□□□ -0.16
HDLBP-201ENST00000310931 LOC105371045A0A1W2PR82 267 aa14.07□□□□□ -0.16
HDLBP-201ENST00000310931 GAPVD1Q14C86 1478 aa14.06□□□□□ -0.16
HDLBP-201ENST00000310931 RAD54L2Q9Y4B4 1467 aa14.04□□□□□ -0.16
HDLBP-201ENST00000310931 RAPGEF2Q9Y4G8 1499 aa14.04□□□□□ -0.16
HDLBP-201ENST00000310931 PRXQ9BXM0 1461 aa14.04□□□□□ -0.16
HDLBP-201ENST00000310931 CARMIL1Q5VZK9 1371 aa14.03□□□□□ -0.16
HDLBP-201ENST00000310931 GRIN2BQ13224 1484 aa14.03□□□□□ -0.16
HDLBP-201ENST00000310931 TARBP1Q13395 1621 aaKnown RBP14.03□□□□□ -0.16
HDLBP-201ENST00000310931 IGF1RP08069 1367 aa14.02□□□□□ -0.17
HDLBP-201ENST00000310931 ABCA5Q8WWZ7 1642 aa14.02□□□□□ -0.17
HDLBP-201ENST00000310931 RUSC2Q8N2Y8 1516 aa14.01□□□□□ -0.17
HDLBP-201ENST00000310931 FHAD1B1AJZ9 1412 aa13.97□□□□□ -0.17
HDLBP-201ENST00000310931 TDRD9Q8NDG6 1382 aaKnown RBP13.95□□□□□ -0.18
HDLBP-201ENST00000310931 MAGI1Q96QZ7 1491 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms