RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-223ENST00000532678 AEBP2Q6ZN18 517 aaPredicted RBP24.73■■□□□ 1.55
PUM1-223ENST00000532678 CHIC1Q5VXU3 224 aa24.19■■□□□ 1.46
PUM1-223ENST00000532678 PHF23Q9BUL5 403 aaPredicted RBP21.22■□□□□ 0.99
PUM1-223ENST00000532678 SENP3Q9H4L4 574 aaPredicted RBP21.07■□□□□ 0.96
PUM1-223ENST00000532678 NISCHQ9Y2I1 1504 aa19.87■□□□□ 0.77
PUM1-223ENST00000532678 PLPPR3Q6T4P5 718 aa19.64■□□□□ 0.73
PUM1-223ENST00000532678 FOXD1Q16676 465 aa19.5■□□□□ 0.71
PUM1-223ENST00000532678 PPP6R1Q9UPN7 881 aa18.7■□□□□ 0.58
PUM1-223ENST00000532678 ADRA2BP18089 450 aa18.65■□□□□ 0.58
PUM1-223ENST00000532678 PIAS4Q8N2W9 510 aaPredicted RBP18.34■□□□□ 0.53
PUM1-223ENST00000532678 MSH5O43196 834 aa18.06■□□□□ 0.48
PUM1-223ENST00000532678 ABCC9O60706 1549 aa17.9■□□□□ 0.46
PUM1-223ENST00000532678 CCDC180Q9P1Z9 1646 aa17.86■□□□□ 0.45
PUM1-223ENST00000532678 PPP4R3CPQ6ZMV5 832 aa17.26■□□□□ 0.35
PUM1-223ENST00000532678 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.34
PUM1-223ENST00000532678 RB1CC1Q8TDY2 1594 aa16.98■□□□□ 0.31
PUM1-223ENST00000532678 MAPK8IP2Q13387 824 aaPredicted RBP16.91■□□□□ 0.3
PUM1-223ENST00000532678 NCBP3Q53F19 620 aaKnown RBP16.85■□□□□ 0.29
PUM1-223ENST00000532678 NACADO15069 1562 aa16.83■□□□□ 0.28
PUM1-223ENST00000532678 CNKSR2Q8WXI2 1034 aa16.83■□□□□ 0.28
PUM1-223ENST00000532678 DMRT2Q9Y5R5 561 aa16.82■□□□□ 0.28
PUM1-223ENST00000532678 KCNA4P22459 653 aa16.77■□□□□ 0.28
PUM1-223ENST00000532678 DCAF8L2P0C7V8 631 aa16.76■□□□□ 0.27
PUM1-223ENST00000532678 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
PUM1-223ENST00000532678 UNC13AQ9UPW8 1703 aa16.71■□□□□ 0.27
PUM1-223ENST00000532678 PABPN1Q86U42 306 aaKnown RBP eCLIP16.63■□□□□ 0.25
PUM1-223ENST00000532678 NPM3O75607 178 aaKnown RBP16.55■□□□□ 0.24
PUM1-223ENST00000532678 MYO15BQ96JP2 1530 aa16.55■□□□□ 0.24
PUM1-223ENST00000532678 RNF216Q9NWF9 866 aaPredicted RBP16.54■□□□□ 0.24
PUM1-223ENST00000532678 BICRAQ9NZM4 1560 aa16.54■□□□□ 0.24
PUM1-223ENST00000532678 ZCCHC6Q5VYS8 1495 aaKnown RBP16.5■□□□□ 0.23
PUM1-223ENST00000532678 HOXD11P31277 338 aaPredicted RBP16.49■□□□□ 0.23
PUM1-223ENST00000532678 POTEDQ86YR6 584 aa16.42■□□□□ 0.22
PUM1-223ENST00000532678 DCAF1Q9Y4B6 1507 aa16.36■□□□□ 0.21
PUM1-223ENST00000532678 SCRIBQ14160 1630 aa16.36■□□□□ 0.21
PUM1-223ENST00000532678 SHROOM4Q9ULL8 1493 aa16.19■□□□□ 0.18
PUM1-223ENST00000532678 CC2D2AQ9P2K1 1620 aa16.16■□□□□ 0.18
PUM1-223ENST00000532678 EIF4G1Q04637 1599 aaKnown RBP16.11■□□□□ 0.17
PUM1-223ENST00000532678 CECR2Q9BXF3 1484 aa16.08■□□□□ 0.16
PUM1-223ENST00000532678 SLC4A1APQ9BWU0 796 aaKnown RBP15.99■□□□□ 0.15
PUM1-223ENST00000532678 DCAF8L1A6NGE4 600 aa15.89■□□□□ 0.13
PUM1-223ENST00000532678 SLC4A2P04920 1241 aa15.64■□□□□ 0.09
PUM1-223ENST00000532678 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.59■□□□□ 0.091e-6■□□□□ 10.2
PUM1-223ENST00000532678 SMARCA4P51532 1647 aa15.55■□□□□ 0.08
PUM1-223ENST00000532678 NCAPD3P42695 1498 aa15.52■□□□□ 0.07
PUM1-223ENST00000532678 ATAD2BQ9ULI0 1458 aa15.52■□□□□ 0.07
PUM1-223ENST00000532678 FOXD4L1Q9NU39 408 aa15.51■□□□□ 0.07
PUM1-223ENST00000532678 SMARCA2P51531 1590 aa15.46■□□□□ 0.07
PUM1-223ENST00000532678 RNF39Q9H2S5 420 aa15.46■□□□□ 0.07
PUM1-223ENST00000532678 HMGXB3Q12766 1538 aa15.45■□□□□ 0.06
PUM1-223ENST00000532678 ZBTB22O15209 634 aa15.43■□□□□ 0.06
PUM1-223ENST00000532678 ERCC6Q03468 1493 aa15.42■□□□□ 0.06
PUM1-223ENST00000532678 BAZ1AQ9NRL2 1556 aaPredicted RBP15.41■□□□□ 0.06
PUM1-223ENST00000532678 NESP48681 1621 aa15.39■□□□□ 0.05
PUM1-223ENST00000532678 U3KPZ7 1027 aaPredicted RBP15.38■□□□□ 0.05
PUM1-223ENST00000532678 BAZ1BQ9UIG0 1483 aaKnown RBP15.38■□□□□ 0.05
PUM1-223ENST00000532678 EHMT2Q96KQ7 1210 aa15.37■□□□□ 0.05
PUM1-223ENST00000532678 MROH2BQ7Z745 1585 aa15.36■□□□□ 0.05
PUM1-223ENST00000532678 CSRNP3Q8WYN3 585 aa15.35■□□□□ 0.05
PUM1-223ENST00000532678 CUX2O14529 1486 aa15.34■□□□□ 0.05
PUM1-223ENST00000532678 PEG3Q9GZU2 1588 aa15.34■□□□□ 0.05
PUM1-223ENST00000532678 MYCNP04198 464 aaPredicted RBP15.33■□□□□ 0.04
PUM1-223ENST00000532678 C1QBPQ07021 282 aaKnown RBP15.3■□□□□ 0.04
PUM1-223ENST00000532678 DNAJC5Q9H3Z4 198 aa15.29■□□□□ 0.04
PUM1-223ENST00000532678 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.26■□□□□ 0.03
PUM1-223ENST00000532678 HNRNPUL2Q1KMD3 747 aaKnown RBP15.26■□□□□ 0.03
PUM1-223ENST00000532678 THOC2Q8NI27 1593 aaKnown RBP15.24■□□□□ 0.03
PUM1-223ENST00000532678 KIF21AQ7Z4S6 1674 aa15.23■□□□□ 0.03
PUM1-223ENST00000532678 WIZO95785 1651 aa15.22■□□□□ 0.03
PUM1-223ENST00000532678 LAMC3Q9Y6N6 1575 aa15.2■□□□□ 0.02
PUM1-223ENST00000532678 SAMD1Q6SPF0 538 aaPredicted RBP15.18■□□□□ 0.02
PUM1-223ENST00000532678 APLP2Q06481 763 aa15.12■□□□□ 0.01
PUM1-223ENST00000532678 ATXN8OSP0DMR3 200 aa15.08■□□□□ 0
PUM1-223ENST00000532678 PDS5BQ9NTI5 1447 aa15.07■□□□□ 0
PUM1-223ENST00000532678 CADPSQ9ULU8 1353 aa15.05■□□□□ -0
PUM1-223ENST00000532678 MRC2Q9UBG0 1479 aa15.01□□□□□ -0.01
PUM1-223ENST00000532678 RSF1Q96T23 1441 aaPredicted RBP15□□□□□ -0.01
PUM1-223ENST00000532678 CACNB1Q02641 598 aaPredicted RBP14.99□□□□□ -0.01
PUM1-223ENST00000532678 WDR62O43379 1518 aa14.98□□□□□ -0.01
PUM1-223ENST00000532678 TOP2AP11388 1531 aaKnown RBP14.97□□□□□ -0.01
PUM1-223ENST00000532678 CEP164Q9UPV0 1460 aa14.95□□□□□ -0.02
PUM1-223ENST00000532678 FANCD2Q9BXW9 1451 aa14.93□□□□□ -0.02
PUM1-223ENST00000532678 SPINK5Q9NQ38 1064 aaPredicted RBP14.9□□□□□ -0.02
PUM1-223ENST00000532678 CFTRP13569 1480 aa14.89□□□□□ -0.03
PUM1-223ENST00000532678 ZNF219Q9P2Y4 722 aaPredicted RBP14.86□□□□□ -0.03
PUM1-223ENST00000532678 PRDM2Q13029 1718 aa14.85□□□□□ -0.03
PUM1-223ENST00000532678 URB2Q14146 1524 aaKnown RBP14.84□□□□□ -0.03
PUM1-223ENST00000532678 CAPN15O75808 1086 aa14.83□□□□□ -0.04
PUM1-223ENST00000532678 ATF5Q9Y2D1 282 aaPredicted RBP14.83□□□□□ -0.04
PUM1-223ENST00000532678 CCDC88BA6NC98 1476 aa14.78□□□□□ -0.04
PUM1-223ENST00000532678 TRHP20396 242 aaPredicted RBP14.73□□□□□ -0.05
PUM1-223ENST00000532678 TRIM41Q8WV44 630 aa14.72□□□□□ -0.05
PUM1-223ENST00000532678 ZNF608Q9ULD9 1512 aaPredicted RBP14.67□□□□□ -0.06
PUM1-223ENST00000532678 DSG3P32926 999 aa14.67□□□□□ -0.06
PUM1-223ENST00000532678 TOPBP1Q92547 1522 aa14.66□□□□□ -0.06
PUM1-223ENST00000532678 IFT140Q96RY7 1462 aa14.63□□□□□ -0.07
PUM1-223ENST00000532678 EIF4G3O43432 1585 aaKnown RBP14.61□□□□□ -0.07
PUM1-223ENST00000532678 DNMBPQ6XZF7 1577 aa14.61□□□□□ -0.07
PUM1-223ENST00000532678 OSCARQ8IYS5 282 aa14.58□□□□□ -0.08
PUM1-223ENST00000532678 RIMBP3CA6NJZ7 1639 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms