RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 NISCHQ9Y2I1 1504 aa25.53■■□□□ 1.68
HDLBP-206ENST00000417540 CCDC180Q9P1Z9 1646 aa22.86■■□□□ 1.25
HDLBP-206ENST00000417540 ABCC9O60706 1549 aa22.43■■□□□ 1.18
HDLBP-206ENST00000417540 RB1CC1Q8TDY2 1594 aa21.46■■□□□ 1.03
HDLBP-206ENST00000417540 NACADO15069 1562 aa21.36■■□□□ 1.01
HDLBP-206ENST00000417540 ZCCHC6Q5VYS8 1495 aaKnown RBP21.34■■□□□ 1.01
HDLBP-206ENST00000417540 UNC13AQ9UPW8 1703 aa21.28■■□□□ 1
HDLBP-206ENST00000417540 MYO15BQ96JP2 1530 aa21.14■□□□□ 0.98
HDLBP-206ENST00000417540 DCAF8L2P0C7V8 631 aa21.12■□□□□ 0.97
HDLBP-206ENST00000417540 DNAJC5BQ9UF47 199 aa21.08■□□□□ 0.97
HDLBP-206ENST00000417540 DCAF1Q9Y4B6 1507 aa21.06■□□□□ 0.96
HDLBP-206ENST00000417540 BICRAQ9NZM4 1560 aa20.97■□□□□ 0.95
HDLBP-206ENST00000417540 SCRIBQ14160 1630 aa20.94■□□□□ 0.94
HDLBP-206ENST00000417540 PABPN1Q86U42 306 aaKnown RBP eCLIP20.81■□□□□ 0.92
HDLBP-206ENST00000417540 SHROOM4Q9ULL8 1493 aa20.53■□□□□ 0.88
HDLBP-206ENST00000417540 EIF4G1Q04637 1599 aaKnown RBP20.38■□□□□ 0.85
HDLBP-206ENST00000417540 CC2D2AQ9P2K1 1620 aa20.33■□□□□ 0.84
HDLBP-206ENST00000417540 CECR2Q9BXF3 1484 aa20.1■□□□□ 0.81
HDLBP-206ENST00000417540 SMARCA4P51532 1647 aa19.95■□□□□ 0.78
HDLBP-206ENST00000417540 BAZ1AQ9NRL2 1556 aaPredicted RBP19.79■□□□□ 0.76
HDLBP-206ENST00000417540 MROH2BQ7Z745 1585 aa19.76■□□□□ 0.75
HDLBP-206ENST00000417540 ATAD2BQ9ULI0 1458 aa19.75■□□□□ 0.75
HDLBP-206ENST00000417540 HMGXB3Q12766 1538 aa19.7■□□□□ 0.74
HDLBP-206ENST00000417540 SMARCA2P51531 1590 aa19.69■□□□□ 0.74
HDLBP-206ENST00000417540 PEG3Q9GZU2 1588 aa19.68■□□□□ 0.74
HDLBP-206ENST00000417540 NCAPD3P42695 1498 aa19.65■□□□□ 0.74
HDLBP-206ENST00000417540 WIZO95785 1651 aa19.61■□□□□ 0.73
HDLBP-206ENST00000417540 BAZ1BQ9UIG0 1483 aaKnown RBP19.59■□□□□ 0.73
HDLBP-206ENST00000417540 DNAJC5Q9H3Z4 198 aa19.48■□□□□ 0.71
HDLBP-206ENST00000417540 NESP48681 1621 aa19.43■□□□□ 0.7
HDLBP-206ENST00000417540 RSF1Q96T23 1441 aaPredicted RBP19.38■□□□□ 0.69
HDLBP-206ENST00000417540 KIF21AQ7Z4S6 1674 aa19.33■□□□□ 0.68
HDLBP-206ENST00000417540 TOP2AP11388 1531 aaKnown RBP19.32■□□□□ 0.68
HDLBP-206ENST00000417540 THOC2Q8NI27 1593 aaKnown RBP19.27■□□□□ 0.67
HDLBP-206ENST00000417540 LAMC3Q9Y6N6 1575 aa19.27■□□□□ 0.67
HDLBP-206ENST00000417540 ERCC6Q03468 1493 aa19.26■□□□□ 0.67
HDLBP-206ENST00000417540 PRDM2Q13029 1718 aa19.11■□□□□ 0.65
HDLBP-206ENST00000417540 CUX2O14529 1486 aa19.08■□□□□ 0.64
HDLBP-206ENST00000417540 CADPSQ9ULU8 1353 aa19.06■□□□□ 0.64
HDLBP-206ENST00000417540 CCDC88BA6NC98 1476 aa19■□□□□ 0.63
HDLBP-206ENST00000417540 CFTRP13569 1480 aa18.99■□□□□ 0.63
HDLBP-206ENST00000417540 PDS5BQ9NTI5 1447 aa18.98■□□□□ 0.63
HDLBP-206ENST00000417540 WDR62O43379 1518 aa18.97■□□□□ 0.63
HDLBP-206ENST00000417540 FANCD2Q9BXW9 1451 aa18.96■□□□□ 0.63
HDLBP-206ENST00000417540 MRC2Q9UBG0 1479 aa18.96■□□□□ 0.63
HDLBP-206ENST00000417540 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
HDLBP-206ENST00000417540 URB2Q14146 1524 aaKnown RBP18.86■□□□□ 0.61
HDLBP-206ENST00000417540 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
HDLBP-206ENST00000417540 SUPT5HO00267 1087 aaKnown RBP18.68■□□□□ 0.58
HDLBP-206ENST00000417540 DNMBPQ6XZF7 1577 aa18.68■□□□□ 0.58
HDLBP-206ENST00000417540 EIF4G3O43432 1585 aaKnown RBP18.59■□□□□ 0.57
HDLBP-206ENST00000417540 ZNF608Q9ULD9 1512 aaPredicted RBP18.57■□□□□ 0.56
HDLBP-206ENST00000417540 CUX1P39880 1505 aa18.56■□□□□ 0.56
HDLBP-206ENST00000417540 TARBP1Q13395 1621 aaKnown RBP18.56■□□□□ 0.56
HDLBP-206ENST00000417540 POLA1P09884 1462 aaPredicted RBP18.52■□□□□ 0.56
HDLBP-206ENST00000417540 TRIM41Q8WV44 630 aa18.52■□□□□ 0.56
HDLBP-206ENST00000417540 WDR97A6NE52 1622 aa18.52■□□□□ 0.55
HDLBP-206ENST00000417540 IFT140Q96RY7 1462 aa18.5■□□□□ 0.55
HDLBP-206ENST00000417540 FGD5Q6ZNL6 1462 aa18.47■□□□□ 0.55
HDLBP-206ENST00000417540 ABCC8Q09428 1581 aa18.46■□□□□ 0.55
HDLBP-206ENST00000417540 RAD54L2Q9Y4B4 1467 aa18.46■□□□□ 0.54
HDLBP-206ENST00000417540 SYNJ1O43426 1573 aa18.43■□□□□ 0.54
HDLBP-206ENST00000417540 CHD1O14646 1710 aa18.41■□□□□ 0.54
HDLBP-206ENST00000417540 BIVM-ERCC5R4GMW8 1640 aa18.4■□□□□ 0.54
HDLBP-206ENST00000417540 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
HDLBP-206ENST00000417540 AQRO60306 1485 aaKnown RBP eCLIP18.34■□□□□ 0.532e-9■■■■□ 25.9
HDLBP-206ENST00000417540 TOP2BQ02880 1626 aa18.34■□□□□ 0.53
HDLBP-206ENST00000417540 ABCA5Q8WWZ7 1642 aa18.32■□□□□ 0.52
HDLBP-206ENST00000417540 SNAPC4Q5SXM2 1469 aa18.27■□□□□ 0.52
HDLBP-206ENST00000417540 SOGA1O94964 1423 aa18.27■□□□□ 0.52
HDLBP-206ENST00000417540 WRNQ14191 1432 aaPredicted RBP eCLIP18.25■□□□□ 0.51
HDLBP-206ENST00000417540 TDRD9Q8NDG6 1382 aaKnown RBP18.24■□□□□ 0.51
HDLBP-206ENST00000417540 ABCA10Q8WWZ4 1543 aa18.23■□□□□ 0.51
HDLBP-206ENST00000417540 ADAMTS12P58397 1594 aa18.17■□□□□ 0.5
HDLBP-206ENST00000417540 RIMBP3CA6NJZ7 1639 aa18.16■□□□□ 0.5
HDLBP-206ENST00000417540 RIMBP3BA6NNM3 1639 aa18.16■□□□□ 0.5
HDLBP-206ENST00000417540 RIMBP3Q9UFD9 1639 aa18.16■□□□□ 0.5
HDLBP-206ENST00000417540 GRIN2BQ13224 1484 aa18.14■□□□□ 0.5
HDLBP-206ENST00000417540 GAPVD1Q14C86 1478 aa18.14■□□□□ 0.49
HDLBP-206ENST00000417540 MAGI1Q96QZ7 1491 aaPredicted RBP18.13■□□□□ 0.49
HDLBP-206ENST00000417540 CLASP1Q7Z460 1538 aa18.12■□□□□ 0.49
HDLBP-206ENST00000417540 OSCARQ8IYS5 282 aa18.09■□□□□ 0.49
HDLBP-206ENST00000417540 ARHGEF11O15085 1522 aa18.08■□□□□ 0.49
HDLBP-206ENST00000417540 SYNJ2O15056 1496 aa18.06■□□□□ 0.48
HDLBP-206ENST00000417540 CEP170Q5SW79 1584 aa18.02■□□□□ 0.48
HDLBP-206ENST00000417540 ERICH3Q5RHP9 1530 aa17.99■□□□□ 0.47
HDLBP-206ENST00000417540 FBLN2P98095 1184 aa17.98■□□□□ 0.47
HDLBP-206ENST00000417540 GRIN2AQ12879 1464 aa17.98■□□□□ 0.47
HDLBP-206ENST00000417540 ARAP1Q96P48 1450 aa17.97■□□□□ 0.47
HDLBP-206ENST00000417540 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
HDLBP-206ENST00000417540 ERCC6L2Q5T890 1561 aa17.93■□□□□ 0.46
HDLBP-206ENST00000417540 CUL7Q14999 1698 aa17.9■□□□□ 0.46
HDLBP-206ENST00000417540 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.45
HDLBP-206ENST00000417540 NUP160Q12769 1436 aa17.89■□□□□ 0.45
HDLBP-206ENST00000417540 SHROOM2Q13796 1616 aa17.87■□□□□ 0.45
HDLBP-206ENST00000417540 CHMP7Q8WUX9 453 aaPredicted RBP17.86■□□□□ 0.45
HDLBP-206ENST00000417540 KIF27Q86VH2 1401 aa17.81■□□□□ 0.44
HDLBP-206ENST00000417540 CYB5RLQ6IPT4 315 aa17.77■□□□□ 0.44
HDLBP-206ENST00000417540 IGF1RP08069 1367 aa17.73■□□□□ 0.43
HDLBP-206ENST00000417540 CTTNBP2Q8WZ74 1663 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms