RNA–Protein interactions for RNA: ENST00000435817.6

FCHSD1-201, Transcript of FCH and double SH3 domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FCHSD1, Length 4,320 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCHSD1-201ENST00000435817 NISCHQ9Y2I1 1504 aa22.72■■□□□ 1.23
FCHSD1-201ENST00000435817 DCAF8L2P0C7V8 631 aa22.04■■□□□ 1.12
FCHSD1-201ENST00000435817 SHROOM4Q9ULL8 1493 aa21.16■□□□□ 0.98
FCHSD1-201ENST00000435817 SUPT5HO00267 1087 aaKnown RBP20.97■□□□□ 0.95
FCHSD1-201ENST00000435817 EHMT2Q96KQ7 1210 aa20.17■□□□□ 0.82
FCHSD1-201ENST00000435817 FAM9AQ8IZU1 332 aaPredicted RBP19.74■□□□□ 0.75
FCHSD1-201ENST00000435817 TTBK1Q5TCY1 1321 aaPredicted RBP19.4■□□□□ 0.7
FCHSD1-201ENST00000435817 ABCC9O60706 1549 aa19.35■□□□□ 0.69
FCHSD1-201ENST00000435817 PCGF6Q9BYE7 350 aa19.32■□□□□ 0.68
FCHSD1-201ENST00000435817 TRIM41Q8WV44 630 aa19.32■□□□□ 0.68
FCHSD1-201ENST00000435817 RANGAP1P46060 587 aaPredicted RBP19.26■□□□□ 0.67
FCHSD1-201ENST00000435817 APLP2Q06481 763 aa19.22■□□□□ 0.67
FCHSD1-201ENST00000435817 LOC105371045A0A1W2PR82 267 aa19.17■□□□□ 0.66
FCHSD1-201ENST00000435817 CHIC1Q5VXU3 224 aa19.17■□□□□ 0.66
FCHSD1-201ENST00000435817 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
FCHSD1-201ENST00000435817 PPARGC1BQ86YN6 1023 aaKnown RBP19.06■□□□□ 0.64
FCHSD1-201ENST00000435817 UBTFP17480 764 aaKnown RBP18.98■□□□□ 0.63
FCHSD1-201ENST00000435817 ZCCHC6Q5VYS8 1495 aaKnown RBP18.92■□□□□ 0.62
FCHSD1-201ENST00000435817 ATP1B4Q9UN42 357 aaPredicted RBP18.87■□□□□ 0.61
FCHSD1-201ENST00000435817 CCER1Q8TC90 406 aaPredicted RBP18.73■□□□□ 0.59
FCHSD1-201ENST00000435817 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
FCHSD1-201ENST00000435817 CCDC180Q9P1Z9 1646 aa18.62■□□□□ 0.57
FCHSD1-201ENST00000435817 ZEB1P37275 1124 aaPredicted RBP18.46■□□□□ 0.55
FCHSD1-201ENST00000435817 TRIM26Q12899 539 aaPredicted RBP18.45■□□□□ 0.54
FCHSD1-201ENST00000435817 ITGAEP38570 1179 aa18.38■□□□□ 0.53
FCHSD1-201ENST00000435817 MYO15BQ96JP2 1530 aa18.32■□□□□ 0.52
FCHSD1-201ENST00000435817 HNRNPUL2Q1KMD3 747 aaKnown RBP18.29■□□□□ 0.52
FCHSD1-201ENST00000435817 HRCP23327 699 aa18.28■□□□□ 0.52
FCHSD1-201ENST00000435817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.22■□□□□ 0.51
FCHSD1-201ENST00000435817 RSF1Q96T23 1441 aaPredicted RBP18.2■□□□□ 0.5
FCHSD1-201ENST00000435817 YTHDC1Q96MU7 727 aaKnown RBP18.19■□□□□ 0.5
FCHSD1-201ENST00000435817 PELP1Q8IZL8 1130 aaKnown RBP18.18■□□□□ 0.5
FCHSD1-201ENST00000435817 CECR2Q9BXF3 1484 aa18.16■□□□□ 0.5
FCHSD1-201ENST00000435817 CENPBP07199 599 aaPredicted RBP18.15■□□□□ 0.5
FCHSD1-201ENST00000435817 CSRNP3Q8WYN3 585 aa17.96■□□□□ 0.47
FCHSD1-201ENST00000435817 MYT1LQ9UL68 1186 aa17.94■□□□□ 0.46
FCHSD1-201ENST00000435817 RB1CC1Q8TDY2 1594 aa17.91■□□□□ 0.46
FCHSD1-201ENST00000435817 P3H3Q8IVL6 736 aa17.9■□□□□ 0.46
FCHSD1-201ENST00000435817 DCAF1Q9Y4B6 1507 aa17.9■□□□□ 0.46
FCHSD1-201ENST00000435817 NACADO15069 1562 aa17.88■□□□□ 0.45
FCHSD1-201ENST00000435817 FAM50AQ14320 339 aaKnown RBP17.88■□□□□ 0.45
FCHSD1-201ENST00000435817 POLR3GLQ9BT43 218 aa17.87■□□□□ 0.45
FCHSD1-201ENST00000435817 CNGB1Q14028 1251 aaPredicted RBP17.87■□□□□ 0.45
FCHSD1-201ENST00000435817 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
FCHSD1-201ENST00000435817 FBLN2P98095 1184 aa17.81■□□□□ 0.44
FCHSD1-201ENST00000435817 ARID3CA6NKF2 412 aa17.78■□□□□ 0.44
FCHSD1-201ENST00000435817 NEFLP07196 543 aa17.71■□□□□ 0.43
FCHSD1-201ENST00000435817 NEUROD1Q13562 356 aa17.69■□□□□ 0.42
FCHSD1-201ENST00000435817 DIEXFQ68CQ4 756 aaKnown RBP17.67■□□□□ 0.42
FCHSD1-201ENST00000435817 TRIM52Q96A61 297 aa17.65■□□□□ 0.42
FCHSD1-201ENST00000435817 WIZO95785 1651 aa17.61■□□□□ 0.41
FCHSD1-201ENST00000435817 BAZ1AQ9NRL2 1556 aaPredicted RBP17.57■□□□□ 0.4
FCHSD1-201ENST00000435817 SOGA1O94964 1423 aa17.57■□□□□ 0.4
FCHSD1-201ENST00000435817 ABCC8Q09428 1581 aa17.56■□□□□ 0.4
FCHSD1-201ENST00000435817 BAZ1BQ9UIG0 1483 aaKnown RBP17.53■□□□□ 0.4
FCHSD1-201ENST00000435817 CCDC88BA6NC98 1476 aa17.53■□□□□ 0.4
FCHSD1-201ENST00000435817 ERICH6Q7L0X2 663 aa17.51■□□□□ 0.39
FCHSD1-201ENST00000435817 WRNQ14191 1432 aaPredicted RBP eCLIP17.5■□□□□ 0.39
FCHSD1-201ENST00000435817 ZNF326Q5BKZ1 582 aaKnown RBP17.47■□□□□ 0.39
FCHSD1-201ENST00000435817 CEP162Q5TB80 1403 aa17.42■□□□□ 0.38
FCHSD1-201ENST00000435817 SLC4A1APQ9BWU0 796 aaKnown RBP17.41■□□□□ 0.38
FCHSD1-201ENST00000435817 ZNF777Q9ULD5 760 aaPredicted RBP17.4■□□□□ 0.38
FCHSD1-201ENST00000435817 CLIP1P30622 1438 aa17.36■□□□□ 0.37
FCHSD1-201ENST00000435817 ZNF316A6NFI3 1004 aaPredicted RBP17.33■□□□□ 0.37
FCHSD1-201ENST00000435817 RUSC2Q8N2Y8 1516 aa17.32■□□□□ 0.36
FCHSD1-201ENST00000435817 CHIC2Q9UKJ5 165 aa17.23■□□□□ 0.35
FCHSD1-201ENST00000435817 GOLGA3Q08378 1498 aa17.23■□□□□ 0.35
FCHSD1-201ENST00000435817 CDK11AQ9UQ88 783 aaPredicted RBP17.22■□□□□ 0.35
FCHSD1-201ENST00000435817 TNIKQ9UKE5 1360 aa17.21■□□□□ 0.35
FCHSD1-201ENST00000435817 SMARCA4P51532 1647 aa17.2■□□□□ 0.34
FCHSD1-201ENST00000435817 ATAD2BQ9ULI0 1458 aa17.2■□□□□ 0.34
FCHSD1-201ENST00000435817 TOP2AP11388 1531 aaKnown RBP17.19■□□□□ 0.34
FCHSD1-201ENST00000435817 ANP32CO43423 234 aa17.19■□□□□ 0.34
FCHSD1-201ENST00000435817 GTF3C3Q9Y5Q9 886 aa17.19■□□□□ 0.34
FCHSD1-201ENST00000435817 BCANQ96GW7 911 aa17.18■□□□□ 0.34
FCHSD1-201ENST00000435817 HIRIP3Q9BW71 556 aaPredicted RBP17.16■□□□□ 0.34
FCHSD1-201ENST00000435817 KANK4Q5T7N3 995 aaPredicted RBP17.12■□□□□ 0.33
FCHSD1-201ENST00000435817 CHMP7Q8WUX9 453 aaPredicted RBP17.12■□□□□ 0.33
FCHSD1-201ENST00000435817 KIF27Q86VH2 1401 aa17.11■□□□□ 0.33
FCHSD1-201ENST00000435817 EEA1Q15075 1411 aa17.11■□□□□ 0.33
FCHSD1-201ENST00000435817 CEP164Q9UPV0 1460 aa17.1■□□□□ 0.33
FCHSD1-201ENST00000435817 CUX2O14529 1486 aa17.09■□□□□ 0.33
FCHSD1-201ENST00000435817 MTUS2Q5JR59 1369 aa17.06■□□□□ 0.32
FCHSD1-201ENST00000435817 DDX10Q13206 875 aaKnown RBP17.05■□□□□ 0.32
FCHSD1-201ENST00000435817 TDRD9Q8NDG6 1382 aaKnown RBP17.04■□□□□ 0.32
FCHSD1-201ENST00000435817 TONSLQ96HA7 1378 aa17.04■□□□□ 0.32
FCHSD1-201ENST00000435817 SMARCA2P51531 1590 aa17.03■□□□□ 0.32
FCHSD1-201ENST00000435817 RRP7BPQ9NSQ0 103 aa17.02■□□□□ 0.31
FCHSD1-201ENST00000435817 RAPGEF2Q9Y4G8 1499 aa17.01■□□□□ 0.31
FCHSD1-201ENST00000435817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.31
FCHSD1-201ENST00000435817 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
FCHSD1-201ENST00000435817 CARMIL1Q5VZK9 1371 aa17■□□□□ 0.31
FCHSD1-201ENST00000435817 CHGAP10645 457 aaKnown RBP16.97■□□□□ 0.31
FCHSD1-201ENST00000435817 ACIN1Q9UKV3 1341 aaKnown RBP16.97■□□□□ 0.31
FCHSD1-201ENST00000435817 DAXXQ9UER7 740 aaPredicted RBP16.96■□□□□ 0.31
FCHSD1-201ENST00000435817 MIER1Q8N108 512 aa16.95■□□□□ 0.3
FCHSD1-201ENST00000435817 NPM1P06748 294 aaKnown RBP eCLIP16.94■□□□□ 0.3
FCHSD1-201ENST00000435817 SIN3AQ96ST3 1273 aa16.94■□□□□ 0.3
FCHSD1-201ENST00000435817 TSPY4P0CV99 314 aa16.93■□□□□ 0.3
FCHSD1-201ENST00000435817 TSPY10P0CW01 314 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms