RNA–Protein interactions for RNA: ENST00000507053.1

DDX46-206, Transcript of DEAD-box helicase 46, humanhuman

TSL 4

Gene DDX46, Length 530 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX46-206ENST00000507053 AEBP2Q6ZN18 517 aaPredicted RBP22.32■■□□□ 1.16
DDX46-206ENST00000507053 CHIC1Q5VXU3 224 aa21.13■□□□□ 0.97
DDX46-206ENST00000507053 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
DDX46-206ENST00000507053 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
DDX46-206ENST00000507053 FOXD1Q16676 465 aa17.71■□□□□ 0.43
DDX46-206ENST00000507053 PLPPR3Q6T4P5 718 aa16.83■□□□□ 0.28
DDX46-206ENST00000507053 PPP6R1Q9UPN7 881 aa16.61■□□□□ 0.25
DDX46-206ENST00000507053 ADRA2BP18089 450 aa16.52■□□□□ 0.24
DDX46-206ENST00000507053 PIAS4Q8N2W9 510 aaPredicted RBP16.49■□□□□ 0.23
DDX46-206ENST00000507053 MSH5O43196 834 aa16.48■□□□□ 0.23
DDX46-206ENST00000507053 POTEDQ86YR6 584 aa16.14■□□□□ 0.17
DDX46-206ENST00000507053 MAPK8IP2Q13387 824 aaPredicted RBP15.19■□□□□ 0.02
DDX46-206ENST00000507053 DMRT2Q9Y5R5 561 aa15.05■□□□□ -0
DDX46-206ENST00000507053 SCAF1Q9H7N4 1312 aaKnown RBP14.98□□□□□ -0.01
DDX46-206ENST00000507053 PPP4R3CPQ6ZMV5 832 aa14.79□□□□□ -0.04
DDX46-206ENST00000507053 HOXD11P31277 338 aaPredicted RBP14.5□□□□□ -0.09
DDX46-206ENST00000507053 CNKSR2Q8WXI2 1034 aa14.48□□□□□ -0.09
DDX46-206ENST00000507053 RNF216Q9NWF9 866 aaPredicted RBP14.37□□□□□ -0.11
DDX46-206ENST00000507053 DCAF8L1A6NGE4 600 aa14.35□□□□□ -0.11
DDX46-206ENST00000507053 NCBP3Q53F19 620 aaKnown RBP14.15□□□□□ -0.14
DDX46-206ENST00000507053 CACNB1Q02641 598 aaPredicted RBP14.14□□□□□ -0.15
DDX46-206ENST00000507053 RNF39Q9H2S5 420 aa14.13□□□□□ -0.15
DDX46-206ENST00000507053 NPM3O75607 178 aaKnown RBP14.04□□□□□ -0.16
DDX46-206ENST00000507053 DNAJC5BQ9UF47 199 aa13.97□□□□□ -0.17
DDX46-206ENST00000507053 C1QBPQ07021 282 aaKnown RBP13.87□□□□□ -0.19
DDX46-206ENST00000507053 KCNA4P22459 653 aa13.81□□□□□ -0.2
DDX46-206ENST00000507053 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.75□□□□□ -0.217e-11■■■□□ 17.7
DDX46-206ENST00000507053 U3KPZ7 1027 aaPredicted RBP13.54□□□□□ -0.24
DDX46-206ENST00000507053 SLC4A2P04920 1241 aa13.46□□□□□ -0.25
DDX46-206ENST00000507053 SPINK5Q9NQ38 1064 aaPredicted RBP13.35□□□□□ -0.27
DDX46-206ENST00000507053 CAPN15O75808 1086 aa13.24□□□□□ -0.29
DDX46-206ENST00000507053 DSG3P32926 999 aa13.23□□□□□ -0.29
DDX46-206ENST00000507053 TRHP20396 242 aaPredicted RBP13.05□□□□□ -0.32
DDX46-206ENST00000507053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.04□□□□□ -0.32
DDX46-206ENST00000507053 HNRNPUL2Q1KMD3 747 aaKnown RBP13.04□□□□□ -0.32
DDX46-206ENST00000507053 APLP2Q06481 763 aa13□□□□□ -0.33
DDX46-206ENST00000507053 SAMD1Q6SPF0 538 aaPredicted RBP13□□□□□ -0.33
DDX46-206ENST00000507053 ZNF219Q9P2Y4 722 aaPredicted RBP12.99□□□□□ -0.33
DDX46-206ENST00000507053 ABCB7O75027 752 aa12.98□□□□□ -0.33
DDX46-206ENST00000507053 SLC4A1APQ9BWU0 796 aaKnown RBP12.97□□□□□ -0.33
DDX46-206ENST00000507053 MYCNP04198 464 aaPredicted RBP12.93□□□□□ -0.34
DDX46-206ENST00000507053 FOXD4L1Q9NU39 408 aa12.82□□□□□ -0.36
DDX46-206ENST00000507053 ZBTB22O15209 634 aa12.74□□□□□ -0.37
DDX46-206ENST00000507053 ATF5Q9Y2D1 282 aaPredicted RBP12.74□□□□□ -0.37
DDX46-206ENST00000507053 POLA2Q14181 598 aa12.72□□□□□ -0.37
DDX46-206ENST00000507053 POTEHQ6S545 545 aa12.62□□□□□ -0.39
DDX46-206ENST00000507053 RBM42Q9BTD8 480 aaKnown RBP12.53□□□□□ -0.4
DDX46-206ENST00000507053 ATXN8OSP0DMR3 200 aa12.41□□□□□ -0.42
DDX46-206ENST00000507053 ZBTB12Q9Y330 459 aaPredicted RBP12.39□□□□□ -0.43
DDX46-206ENST00000507053 OSCARQ8IYS5 282 aa12.33□□□□□ -0.44
DDX46-206ENST00000507053 CHRDL2Q6WN34 429 aa12.32□□□□□ -0.44
DDX46-206ENST00000507053 AKT1S1Q96B36 256 aa12.29□□□□□ -0.44
DDX46-206ENST00000507053 REM2Q8IYK8 340 aaPredicted RBP12.21□□□□□ -0.45
DDX46-206ENST00000507053 MKRN4PQ13434 485 aaPredicted RBP12.15□□□□□ -0.46
DDX46-206ENST00000507053 CSRNP3Q8WYN3 585 aa12.12□□□□□ -0.47
DDX46-206ENST00000507053 FBLN2P98095 1184 aa12.1□□□□□ -0.47
DDX46-206ENST00000507053 PITPNM1O00562 1244 aa12.08□□□□□ -0.48
DDX46-206ENST00000507053 SPDYE2BA6NHP3 402 aa12.05□□□□□ -0.48
DDX46-206ENST00000507053 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
DDX46-206ENST00000507053 SPDYE2Q495Y8 402 aa12.05□□□□□ -0.48
DDX46-206ENST00000507053 PIP4P2Q8N4L2 257 aa12.05□□□□□ -0.48
DDX46-206ENST00000507053 FXR2P51116 673 aaKnown RBP eCLIP11.98□□□□□ -0.49
DDX46-206ENST00000507053 SSUH2Q9Y2M2 353 aa11.95□□□□□ -0.5
DDX46-206ENST00000507053 EHMT2Q96KQ7 1210 aa11.92□□□□□ -0.5
DDX46-206ENST00000507053 ZNF692Q9BU19 519 aaPredicted RBP11.91□□□□□ -0.5
DDX46-206ENST00000507053 SPDYE1Q8NFV5 336 aaPredicted RBP11.83□□□□□ -0.52
DDX46-206ENST00000507053 SP7Q8TDD2 431 aaPredicted RBP11.83□□□□□ -0.52
DDX46-206ENST00000507053 CLEC11AQ9Y240 323 aa11.8□□□□□ -0.52
DDX46-206ENST00000507053 HAX1O00165 279 aa11.78□□□□□ -0.52
DDX46-206ENST00000507053 PABPN1Q86U42 306 aaKnown RBP eCLIP11.76□□□□□ -0.53
DDX46-206ENST00000507053 PRKAR2AP13861 404 aaKnown RBP11.74□□□□□ -0.53
DDX46-206ENST00000507053 EVX2Q03828 476 aa11.74□□□□□ -0.53
DDX46-206ENST00000507053 CHADLQ6NUI6 762 aa11.63□□□□□ -0.55
DDX46-206ENST00000507053 PRR29P0C7W0 189 aa11.61□□□□□ -0.55
DDX46-206ENST00000507053 C19orf67A6NJJ6 358 aa11.59□□□□□ -0.55
DDX46-206ENST00000507053 SPDYE4A6NLX3 237 aa11.5□□□□□ -0.57
DDX46-206ENST00000507053 FARP1Q9Y4F1 1045 aaPredicted RBP11.46□□□□□ -0.57
DDX46-206ENST00000507053 GABBR2O75899 941 aa11.41□□□□□ -0.58
DDX46-206ENST00000507053 CREBZFQ9NS37 354 aa11.4□□□□□ -0.58
DDX46-206ENST00000507053 CD44P16070 742 aaKnown RBP11.36□□□□□ -0.59
DDX46-206ENST00000507053 STAG3Q9UJ98 1225 aa11.36□□□□□ -0.59
DDX46-206ENST00000507053 PROM2Q8N271 834 aa11.29□□□□□ -0.6
DDX46-206ENST00000507053 MNX1P50219 401 aaPredicted RBP11.24□□□□□ -0.61
DDX46-206ENST00000507053 POTEIP0CG38 1075 aa11.23□□□□□ -0.61
DDX46-206ENST00000507053 ZNF579Q8NAF0 562 aaKnown RBP11.21□□□□□ -0.61
DDX46-206ENST00000507053 ZRANB1Q9UGI0 708 aa11.2□□□□□ -0.62
DDX46-206ENST00000507053 CLCN6P51797 869 aa11.14□□□□□ -0.63
DDX46-206ENST00000507053 GALR2O43603 387 aaPredicted RBP11.1□□□□□ -0.63
DDX46-206ENST00000507053 LHX8Q68G74 356 aa11.09□□□□□ -0.63
DDX46-206ENST00000507053 PHF12Q96QT6 1004 aa11.09□□□□□ -0.63
DDX46-206ENST00000507053 NPM1P06748 294 aaKnown RBP eCLIP11.08□□□□□ -0.64
DDX46-206ENST00000507053 DCBLD2Q96PD2 775 aa11.04□□□□□ -0.64
DDX46-206ENST00000507053 PAK3O75914 559 aaPredicted RBP11.03□□□□□ -0.64
DDX46-206ENST00000507053 FKBP8Q14318 412 aa10.94□□□□□ -0.66
DDX46-206ENST00000507053 MIER1Q8N108 512 aa10.94□□□□□ -0.66
DDX46-206ENST00000507053 TSPYL2Q9H2G4 693 aaPredicted RBP10.94□□□□□ -0.66
DDX46-206ENST00000507053 MS4A3Q96HJ5 214 aa10.93□□□□□ -0.66
DDX46-206ENST00000507053 CCDC61Q9Y6R9 512 aa10.93□□□□□ -0.66
DDX46-206ENST00000507053 PELP1Q8IZL8 1130 aaKnown RBP10.92□□□□□ -0.66
DDX46-206ENST00000507053 RASEFQ8IZ41 740 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms