RNA–Protein interactions for RNA: ENST00000373742.6

PUM1-203, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2 BASIC

Gene PUM1, Length 3,515 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-203ENST00000373742 NISCHQ9Y2I1 1504 aa19.05■□□□□ 0.64
PUM1-203ENST00000373742 CCDC180Q9P1Z9 1646 aa16.24■□□□□ 0.19
PUM1-203ENST00000373742 SHROOM4Q9ULL8 1493 aa16.23■□□□□ 0.19
PUM1-203ENST00000373742 ZCCHC6Q5VYS8 1495 aaKnown RBP16.05■□□□□ 0.16
PUM1-203ENST00000373742 DCAF8L2P0C7V8 631 aa16.05■□□□□ 0.16
PUM1-203ENST00000373742 SUPT5HO00267 1087 aaKnown RBP15.73■□□□□ 0.11
PUM1-203ENST00000373742 DCAF1Q9Y4B6 1507 aa15.53■□□□□ 0.08
PUM1-203ENST00000373742 ABCC9O60706 1549 aa15.48■□□□□ 0.07
PUM1-203ENST00000373742 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
PUM1-203ENST00000373742 MYO15BQ96JP2 1530 aa15.15■□□□□ 0.02
PUM1-203ENST00000373742 NACADO15069 1562 aa15.1■□□□□ 0.01
PUM1-203ENST00000373742 CHIC1Q5VXU3 224 aa15.09■□□□□ 0.01
PUM1-203ENST00000373742 RSF1Q96T23 1441 aaPredicted RBP15□□□□□ -0.01
PUM1-203ENST00000373742 CECR2Q9BXF3 1484 aa14.98□□□□□ -0.01
PUM1-203ENST00000373742 RB1CC1Q8TDY2 1594 aa14.94□□□□□ -0.02
PUM1-203ENST00000373742 MROH2BQ7Z745 1585 aa14.87□□□□□ -0.03
PUM1-203ENST00000373742 UNC13AQ9UPW8 1703 aa14.8□□□□□ -0.04
PUM1-203ENST00000373742 PABPN1Q86U42 306 aaKnown RBP eCLIP14.8□□□□□ -0.04
PUM1-203ENST00000373742 WIZO95785 1651 aa14.78□□□□□ -0.04
PUM1-203ENST00000373742 LOC105371045A0A1W2PR82 267 aa14.73□□□□□ -0.05
PUM1-203ENST00000373742 BICRAQ9NZM4 1560 aa14.63□□□□□ -0.07
PUM1-203ENST00000373742 BAZ1AQ9NRL2 1556 aaPredicted RBP14.62□□□□□ -0.07
PUM1-203ENST00000373742 TRIM41Q8WV44 630 aa14.59□□□□□ -0.07
PUM1-203ENST00000373742 FAM9AQ8IZU1 332 aaPredicted RBP14.58□□□□□ -0.07
PUM1-203ENST00000373742 SMARCA4P51532 1647 aa14.58□□□□□ -0.08
PUM1-203ENST00000373742 EHMT2Q96KQ7 1210 aa14.57□□□□□ -0.08
PUM1-203ENST00000373742 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.1
PUM1-203ENST00000373742 CCDC88BA6NC98 1476 aa14.45□□□□□ -0.1
PUM1-203ENST00000373742 SMARCA2P51531 1590 aa14.41□□□□□ -0.1
PUM1-203ENST00000373742 EIF4G1Q04637 1599 aaKnown RBP14.4□□□□□ -0.1
PUM1-203ENST00000373742 ABCC8Q09428 1581 aa14.38□□□□□ -0.11
PUM1-203ENST00000373742 PCGF6Q9BYE7 350 aa14.38□□□□□ -0.11
PUM1-203ENST00000373742 ATAD2BQ9ULI0 1458 aa14.28□□□□□ -0.12
PUM1-203ENST00000373742 PEG3Q9GZU2 1588 aa14.25□□□□□ -0.13
PUM1-203ENST00000373742 BAZ1BQ9UIG0 1483 aaKnown RBP14.22□□□□□ -0.13
PUM1-203ENST00000373742 SOGA1O94964 1423 aa14.18□□□□□ -0.14
PUM1-203ENST00000373742 PPARGC1BQ86YN6 1023 aaKnown RBP14.16□□□□□ -0.14
PUM1-203ENST00000373742 RUSC2Q8N2Y8 1516 aa14.16□□□□□ -0.14
PUM1-203ENST00000373742 HRCP23327 699 aa14.08□□□□□ -0.16
PUM1-203ENST00000373742 WRNQ14191 1432 aaPredicted RBP eCLIP14.08□□□□□ -0.161e-10■□□□□ 9.9
PUM1-203ENST00000373742 SYNJ1O43426 1573 aa14.07□□□□□ -0.16
PUM1-203ENST00000373742 TRIM26Q12899 539 aaPredicted RBP14.05□□□□□ -0.16
PUM1-203ENST00000373742 NCAPD3P42695 1498 aa14□□□□□ -0.17
PUM1-203ENST00000373742 TTBK1Q5TCY1 1321 aaPredicted RBP14□□□□□ -0.17
PUM1-203ENST00000373742 CSRNP3Q8WYN3 585 aa13.99□□□□□ -0.17
PUM1-203ENST00000373742 HMGXB3Q12766 1538 aa13.96□□□□□ -0.17
PUM1-203ENST00000373742 UBTFP17480 764 aaKnown RBP13.96□□□□□ -0.17
PUM1-203ENST00000373742 CEP162Q5TB80 1403 aa13.92□□□□□ -0.18
PUM1-203ENST00000373742 RANGAP1P46060 587 aaPredicted RBP13.91□□□□□ -0.18
PUM1-203ENST00000373742 CC2D2AQ9P2K1 1620 aa13.89□□□□□ -0.19
PUM1-203ENST00000373742 TOP2BQ02880 1626 aa13.86□□□□□ -0.19
PUM1-203ENST00000373742 TNIKQ9UKE5 1360 aa13.85□□□□□ -0.19
PUM1-203ENST00000373742 EEA1Q15075 1411 aa13.85□□□□□ -0.19
PUM1-203ENST00000373742 CFTRP13569 1480 aa13.84□□□□□ -0.19
PUM1-203ENST00000373742 CUX1P39880 1505 aa13.84□□□□□ -0.19
PUM1-203ENST00000373742 GOLGA3Q08378 1498 aa13.83□□□□□ -0.2
PUM1-203ENST00000373742 RAPGEF2Q9Y4G8 1499 aa13.82□□□□□ -0.2
PUM1-203ENST00000373742 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
PUM1-203ENST00000373742 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
PUM1-203ENST00000373742 CEP164Q9UPV0 1460 aa13.77□□□□□ -0.2
PUM1-203ENST00000373742 CADPSQ9ULU8 1353 aa13.75□□□□□ -0.21
PUM1-203ENST00000373742 KIF21BO75037 1637 aa13.74□□□□□ -0.21
PUM1-203ENST00000373742 NESP48681 1621 aa13.73□□□□□ -0.21
PUM1-203ENST00000373742 CLIP1P30622 1438 aa13.7□□□□□ -0.22
PUM1-203ENST00000373742 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.69□□□□□ -0.22
PUM1-203ENST00000373742 PRDM2Q13029 1718 aa13.66□□□□□ -0.22
PUM1-203ENST00000373742 PRXQ9BXM0 1461 aa13.65□□□□□ -0.22
PUM1-203ENST00000373742 FANCD2Q9BXW9 1451 aa13.64□□□□□ -0.23
PUM1-203ENST00000373742 KIF27Q86VH2 1401 aa13.64□□□□□ -0.23
PUM1-203ENST00000373742 FGD5Q6ZNL6 1462 aa13.63□□□□□ -0.23
PUM1-203ENST00000373742 CUX2O14529 1486 aa13.63□□□□□ -0.23
PUM1-203ENST00000373742 RAD54L2Q9Y4B4 1467 aa13.59□□□□□ -0.23
PUM1-203ENST00000373742 VPS8Q8N3P4 1428 aa13.58□□□□□ -0.24
PUM1-203ENST00000373742 IGF1RP08069 1367 aa13.57□□□□□ -0.24
PUM1-203ENST00000373742 ERICH3Q5RHP9 1530 aa13.56□□□□□ -0.24
PUM1-203ENST00000373742 CCER1Q8TC90 406 aaPredicted RBP13.55□□□□□ -0.24
PUM1-203ENST00000373742 ARAP1Q96P48 1450 aa13.54□□□□□ -0.24
PUM1-203ENST00000373742 HNRNPUL2Q1KMD3 747 aaKnown RBP13.53□□□□□ -0.24
PUM1-203ENST00000373742 TOPBP1Q92547 1522 aa13.52□□□□□ -0.25
PUM1-203ENST00000373742 POLA1P09884 1462 aaPredicted RBP13.51□□□□□ -0.25
PUM1-203ENST00000373742 KANK4Q5T7N3 995 aaPredicted RBP13.5□□□□□ -0.25
PUM1-203ENST00000373742 ZEB1P37275 1124 aaPredicted RBP13.5□□□□□ -0.25
PUM1-203ENST00000373742 APLP2Q06481 763 aa13.49□□□□□ -0.25
PUM1-203ENST00000373742 URB2Q14146 1524 aaKnown RBP13.49□□□□□ -0.25
PUM1-203ENST00000373742 CARMIL1Q5VZK9 1371 aa13.49□□□□□ -0.25
PUM1-203ENST00000373742 DNMBPQ6XZF7 1577 aa13.48□□□□□ -0.25
PUM1-203ENST00000373742 P3H3Q8IVL6 736 aa13.47□□□□□ -0.25
PUM1-203ENST00000373742 ARHGAP35Q9NRY4 1499 aa13.47□□□□□ -0.25
PUM1-203ENST00000373742 TDRD9Q8NDG6 1382 aaKnown RBP13.44□□□□□ -0.26
PUM1-203ENST00000373742 LAMC3Q9Y6N6 1575 aa13.44□□□□□ -0.26
PUM1-203ENST00000373742 KIF21AQ7Z4S6 1674 aa13.43□□□□□ -0.26
PUM1-203ENST00000373742 ABCA10Q8WWZ4 1543 aa13.41□□□□□ -0.26
PUM1-203ENST00000373742 PDS5BQ9NTI5 1447 aa13.37□□□□□ -0.27
PUM1-203ENST00000373742 ATP1B4Q9UN42 357 aaPredicted RBP13.36□□□□□ -0.27
PUM1-203ENST00000373742 FHOD3Q2V2M9 1422 aa13.33□□□□□ -0.28
PUM1-203ENST00000373742 ITGAEP38570 1179 aa13.33□□□□□ -0.28
PUM1-203ENST00000373742 WDR97A6NE52 1622 aa13.32□□□□□ -0.28
PUM1-203ENST00000373742 GAPVD1Q14C86 1478 aa13.3□□□□□ -0.28
PUM1-203ENST00000373742 AQRO60306 1485 aaKnown RBP eCLIP13.28□□□□□ -0.287e-7■■■■■ 33.4
PUM1-203ENST00000373742 ABCA5Q8WWZ7 1642 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms