RNA–Protein interactions for RNA: ENST00000413241.5

HDLBP-205, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-205ENST00000413241 NISCHQ9Y2I1 1504 aa25.35■■□□□ 1.65
HDLBP-205ENST00000413241 CCDC180Q9P1Z9 1646 aa22.73■■□□□ 1.23
HDLBP-205ENST00000413241 ABCC9O60706 1549 aa22.58■■□□□ 1.21
HDLBP-205ENST00000413241 RB1CC1Q8TDY2 1594 aa21.59■■□□□ 1.05
HDLBP-205ENST00000413241 NACADO15069 1562 aa21.47■■□□□ 1.03
HDLBP-205ENST00000413241 DCAF8L2P0C7V8 631 aa21.32■■□□□ 1
HDLBP-205ENST00000413241 MYO15BQ96JP2 1530 aa21.23■□□□□ 0.99
HDLBP-205ENST00000413241 DNAJC5BQ9UF47 199 aa21.08■□□□□ 0.97
HDLBP-205ENST00000413241 UNC13AQ9UPW8 1703 aa21.07■□□□□ 0.96
HDLBP-205ENST00000413241 ZCCHC6Q5VYS8 1495 aaKnown RBP21.03■□□□□ 0.96
HDLBP-205ENST00000413241 PABPN1Q86U42 306 aaKnown RBP eCLIP21.03■□□□□ 0.96
HDLBP-205ENST00000413241 DCAF1Q9Y4B6 1507 aa20.98■□□□□ 0.95
HDLBP-205ENST00000413241 BICRAQ9NZM4 1560 aa20.93■□□□□ 0.94
HDLBP-205ENST00000413241 SHROOM4Q9ULL8 1493 aa20.72■□□□□ 0.91
HDLBP-205ENST00000413241 SCRIBQ14160 1630 aa20.67■□□□□ 0.9
HDLBP-205ENST00000413241 CC2D2AQ9P2K1 1620 aa20.43■□□□□ 0.86
HDLBP-205ENST00000413241 EIF4G1Q04637 1599 aaKnown RBP20.42■□□□□ 0.86
HDLBP-205ENST00000413241 CECR2Q9BXF3 1484 aa20.35■□□□□ 0.85
HDLBP-205ENST00000413241 NCAPD3P42695 1498 aa19.8■□□□□ 0.76
HDLBP-205ENST00000413241 SMARCA4P51532 1647 aa19.76■□□□□ 0.75
HDLBP-205ENST00000413241 ATAD2BQ9ULI0 1458 aa19.74■□□□□ 0.75
HDLBP-205ENST00000413241 SMARCA2P51531 1590 aa19.72■□□□□ 0.75
HDLBP-205ENST00000413241 BAZ1AQ9NRL2 1556 aaPredicted RBP19.69■□□□□ 0.74
HDLBP-205ENST00000413241 HMGXB3Q12766 1538 aa19.68■□□□□ 0.74
HDLBP-205ENST00000413241 PEG3Q9GZU2 1588 aa19.58■□□□□ 0.73
HDLBP-205ENST00000413241 BAZ1BQ9UIG0 1483 aaKnown RBP19.57■□□□□ 0.72
HDLBP-205ENST00000413241 ERCC6Q03468 1493 aa19.52■□□□□ 0.72
HDLBP-205ENST00000413241 MROH2BQ7Z745 1585 aa19.52■□□□□ 0.71
HDLBP-205ENST00000413241 CUX2O14529 1486 aa19.48■□□□□ 0.71
HDLBP-205ENST00000413241 NESP48681 1621 aa19.43■□□□□ 0.7
HDLBP-205ENST00000413241 LAMC3Q9Y6N6 1575 aa19.36■□□□□ 0.69
HDLBP-205ENST00000413241 DNAJC5Q9H3Z4 198 aa19.32■□□□□ 0.68
HDLBP-205ENST00000413241 WIZO95785 1651 aa19.3■□□□□ 0.68
HDLBP-205ENST00000413241 THOC2Q8NI27 1593 aaKnown RBP19.24■□□□□ 0.67
HDLBP-205ENST00000413241 PDS5BQ9NTI5 1447 aa19.24■□□□□ 0.67
HDLBP-205ENST00000413241 CADPSQ9ULU8 1353 aa19.2■□□□□ 0.66
HDLBP-205ENST00000413241 KIF21AQ7Z4S6 1674 aa19.2■□□□□ 0.66
HDLBP-205ENST00000413241 RSF1Q96T23 1441 aaPredicted RBP19.16■□□□□ 0.66
HDLBP-205ENST00000413241 TOP2AP11388 1531 aaKnown RBP19.07■□□□□ 0.64
HDLBP-205ENST00000413241 MRC2Q9UBG0 1479 aa19.05■□□□□ 0.64
HDLBP-205ENST00000413241 CFTRP13569 1480 aa19.01■□□□□ 0.63
HDLBP-205ENST00000413241 WDR62O43379 1518 aa19■□□□□ 0.63
HDLBP-205ENST00000413241 CEP164Q9UPV0 1460 aa19■□□□□ 0.63
HDLBP-205ENST00000413241 FANCD2Q9BXW9 1451 aa18.98■□□□□ 0.63
HDLBP-205ENST00000413241 CCDC88BA6NC98 1476 aa18.84■□□□□ 0.61
HDLBP-205ENST00000413241 PRDM2Q13029 1718 aa18.83■□□□□ 0.61
HDLBP-205ENST00000413241 URB2Q14146 1524 aaKnown RBP18.81■□□□□ 0.6
HDLBP-205ENST00000413241 ABCC8Q09428 1581 aa18.64■□□□□ 0.57
HDLBP-205ENST00000413241 TOPBP1Q92547 1522 aa18.63■□□□□ 0.57
HDLBP-205ENST00000413241 IFT140Q96RY7 1462 aa18.62■□□□□ 0.57
HDLBP-205ENST00000413241 OSCARQ8IYS5 282 aa18.59■□□□□ 0.57
HDLBP-205ENST00000413241 DNMBPQ6XZF7 1577 aa18.58■□□□□ 0.56
HDLBP-205ENST00000413241 ZNF608Q9ULD9 1512 aaPredicted RBP18.54■□□□□ 0.56
HDLBP-205ENST00000413241 TRIM41Q8WV44 630 aa18.49■□□□□ 0.55
HDLBP-205ENST00000413241 EIF4G3O43432 1585 aaKnown RBP18.47■□□□□ 0.55
HDLBP-205ENST00000413241 TARBP1Q13395 1621 aaKnown RBP18.46■□□□□ 0.55
HDLBP-205ENST00000413241 POLA1P09884 1462 aaPredicted RBP18.45■□□□□ 0.54
HDLBP-205ENST00000413241 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.542e-7■■■■□ 25.9
HDLBP-205ENST00000413241 SOGA1O94964 1423 aa18.36■□□□□ 0.53
HDLBP-205ENST00000413241 RAD54L2Q9Y4B4 1467 aa18.36■□□□□ 0.53
HDLBP-205ENST00000413241 SUPT5HO00267 1087 aaKnown RBP18.35■□□□□ 0.53
HDLBP-205ENST00000413241 FGD5Q6ZNL6 1462 aa18.34■□□□□ 0.53
HDLBP-205ENST00000413241 CUX1P39880 1505 aa18.33■□□□□ 0.53
HDLBP-205ENST00000413241 WDR97A6NE52 1622 aa18.33■□□□□ 0.52
HDLBP-205ENST00000413241 RIMBP3CA6NJZ7 1639 aa18.32■□□□□ 0.52
HDLBP-205ENST00000413241 RIMBP3BA6NNM3 1639 aa18.32■□□□□ 0.52
HDLBP-205ENST00000413241 RIMBP3Q9UFD9 1639 aa18.32■□□□□ 0.52
HDLBP-205ENST00000413241 CHD1O14646 1710 aa18.31■□□□□ 0.52
HDLBP-205ENST00000413241 TDRD9Q8NDG6 1382 aaKnown RBP18.3■□□□□ 0.52
HDLBP-205ENST00000413241 ARHGEF11O15085 1522 aa18.28■□□□□ 0.52
HDLBP-205ENST00000413241 FBLN2P98095 1184 aa18.25■□□□□ 0.51
HDLBP-205ENST00000413241 SNAPC4Q5SXM2 1469 aa18.22■□□□□ 0.51
HDLBP-205ENST00000413241 GRIN2BQ13224 1484 aa18.2■□□□□ 0.5
HDLBP-205ENST00000413241 MAGI1Q96QZ7 1491 aaPredicted RBP18.2■□□□□ 0.5
HDLBP-205ENST00000413241 CHMP7Q8WUX9 453 aaPredicted RBP18.16■□□□□ 0.5
HDLBP-205ENST00000413241 GAPVD1Q14C86 1478 aa18.15■□□□□ 0.5
HDLBP-205ENST00000413241 ABCA10Q8WWZ4 1543 aa18.15■□□□□ 0.5
HDLBP-205ENST00000413241 PBRM1Q86U86 1689 aa18.14■□□□□ 0.49
HDLBP-205ENST00000413241 SYNJ2O15056 1496 aa18.14■□□□□ 0.49
HDLBP-205ENST00000413241 SYNJ1O43426 1573 aa18.13■□□□□ 0.49
HDLBP-205ENST00000413241 CLASP1Q7Z460 1538 aa18.12■□□□□ 0.49
HDLBP-205ENST00000413241 ABCA5Q8WWZ7 1642 aa18.12■□□□□ 0.49
HDLBP-205ENST00000413241 CYB5RLQ6IPT4 315 aa18.11■□□□□ 0.49
HDLBP-205ENST00000413241 WRNQ14191 1432 aaPredicted RBP eCLIP18.1■□□□□ 0.49
HDLBP-205ENST00000413241 BIVM-ERCC5R4GMW8 1640 aa18.09■□□□□ 0.49
HDLBP-205ENST00000413241 ARAP1Q96P48 1450 aa18.09■□□□□ 0.49
HDLBP-205ENST00000413241 TOP2BQ02880 1626 aa18.09■□□□□ 0.49
HDLBP-205ENST00000413241 ADAMTS12P58397 1594 aa17.96■□□□□ 0.47
HDLBP-205ENST00000413241 GRIN2AQ12879 1464 aa17.96■□□□□ 0.47
HDLBP-205ENST00000413241 ERICH3Q5RHP9 1530 aa17.94■□□□□ 0.46
HDLBP-205ENST00000413241 FHAD1B1AJZ9 1412 aa17.93■□□□□ 0.46
HDLBP-205ENST00000413241 NUP160Q12769 1436 aa17.9■□□□□ 0.46
HDLBP-205ENST00000413241 TRHP20396 242 aaPredicted RBP17.89■□□□□ 0.45
HDLBP-205ENST00000413241 CEP170Q5SW79 1584 aa17.88■□□□□ 0.45
HDLBP-205ENST00000413241 SHROOM2Q13796 1616 aa17.82■□□□□ 0.44
HDLBP-205ENST00000413241 ERCC6L2Q5T890 1561 aa17.81■□□□□ 0.44
HDLBP-205ENST00000413241 KIF27Q86VH2 1401 aa17.73■□□□□ 0.43
HDLBP-205ENST00000413241 JPH4Q96JJ6 628 aa17.72■□□□□ 0.43
HDLBP-205ENST00000413241 IGF1RP08069 1367 aa17.71■□□□□ 0.43
HDLBP-205ENST00000413241 RUSC2Q8N2Y8 1516 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms