RNA–Protein interactions for RNA: ENST00000437413.2

SMG1P3-202, Transcript of SMG1 pseudogene 3, humanhuman

TSL 4

Gene SMG1P3, Length 589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-202ENST00000437413 NISCHQ9Y2I1 1504 aa52.71■■■■■ 6.03
SMG1P3-202ENST00000437413 CCDC180Q9P1Z9 1646 aa46.83■■■■■ 5.09
SMG1P3-202ENST00000437413 ABCC9O60706 1549 aa45.31■■■■■ 4.84
SMG1P3-202ENST00000437413 ZCCHC6Q5VYS8 1495 aaKnown RBP43.98■■■■■ 4.63
SMG1P3-202ENST00000437413 NACADO15069 1562 aa43.93■■■■■ 4.62
SMG1P3-202ENST00000437413 RB1CC1Q8TDY2 1594 aa43.88■■■■■ 4.62
SMG1P3-202ENST00000437413 MYO15BQ96JP2 1530 aa43.84■■■■■ 4.61
SMG1P3-202ENST00000437413 DCAF1Q9Y4B6 1507 aa43.74■■■■■ 4.59
SMG1P3-202ENST00000437413 DCAF8L2P0C7V8 631 aa43.74■■■■■ 4.59
SMG1P3-202ENST00000437413 UNC13AQ9UPW8 1703 aa42.81■■■■■ 4.44
SMG1P3-202ENST00000437413 SCRIBQ14160 1630 aa42.58■■■■■ 4.41
SMG1P3-202ENST00000437413 BICRAQ9NZM4 1560 aa42.45■■■■■ 4.39
SMG1P3-202ENST00000437413 PABPN1Q86U42 306 aaKnown RBP eCLIP42.33■■■■■ 4.375e-6■■■■□ 22.2
SMG1P3-202ENST00000437413 SHROOM4Q9ULL8 1493 aa42.24■■■■■ 4.35
SMG1P3-202ENST00000437413 EIF4G1Q04637 1599 aaKnown RBP41.33■■■■■ 4.21
SMG1P3-202ENST00000437413 DNAJC5BQ9UF47 199 aa41.21■■■■■ 4.19
SMG1P3-202ENST00000437413 CC2D2AQ9P2K1 1620 aa41.07■■■■■ 4.16
SMG1P3-202ENST00000437413 CECR2Q9BXF3 1484 aa40.92■■■■■ 4.14
SMG1P3-202ENST00000437413 BAZ1AQ9NRL2 1556 aaPredicted RBP40.88■■■■■ 4.13
SMG1P3-202ENST00000437413 SMARCA4P51532 1647 aa40.83■■■■■ 4.13
SMG1P3-202ENST00000437413 SMARCA2P51531 1590 aa40.57■■■■■ 4.08
SMG1P3-202ENST00000437413 MROH2BQ7Z745 1585 aa40.55■■■■■ 4.08
SMG1P3-202ENST00000437413 ATAD2BQ9ULI0 1458 aa40.51■■■■■ 4.08
SMG1P3-202ENST00000437413 PEG3Q9GZU2 1588 aa40.51■■■■■ 4.08
SMG1P3-202ENST00000437413 NCAPD3P42695 1498 aa40.5■■■■■ 4.07
SMG1P3-202ENST00000437413 HMGXB3Q12766 1538 aa40.36■■■■■ 4.05
SMG1P3-202ENST00000437413 RSF1Q96T23 1441 aaPredicted RBP40.23■■■■■ 4.03
SMG1P3-202ENST00000437413 BAZ1BQ9UIG0 1483 aaKnown RBP40.21■■■■■ 4.03
SMG1P3-202ENST00000437413 WIZO95785 1651 aa40.14■■■■■ 4.02
SMG1P3-202ENST00000437413 TOP2AP11388 1531 aaKnown RBP39.81■■■■□ 3.96
SMG1P3-202ENST00000437413 LAMC3Q9Y6N6 1575 aa39.41■■■■□ 3.9
SMG1P3-202ENST00000437413 SUPT5HO00267 1087 aaKnown RBP39.34■■■■□ 3.89
SMG1P3-202ENST00000437413 CADPSQ9ULU8 1353 aa39.31■■■■□ 3.88
SMG1P3-202ENST00000437413 CCDC88BA6NC98 1476 aa39.28■■■■□ 3.88
SMG1P3-202ENST00000437413 NESP48681 1621 aa39.28■■■■□ 3.88
SMG1P3-202ENST00000437413 CFTRP13569 1480 aa39.15■■■■□ 3.86
SMG1P3-202ENST00000437413 PDS5BQ9NTI5 1447 aa39.12■■■■□ 3.85
SMG1P3-202ENST00000437413 ERCC6Q03468 1493 aa39.11■■■■□ 3.85
SMG1P3-202ENST00000437413 PRDM2Q13029 1718 aa38.94■■■■□ 3.82
SMG1P3-202ENST00000437413 KIF21AQ7Z4S6 1674 aa38.9■■■■□ 3.82
SMG1P3-202ENST00000437413 FANCD2Q9BXW9 1451 aa38.83■■■■□ 3.81
SMG1P3-202ENST00000437413 CEP164Q9UPV0 1460 aa38.78■■■■□ 3.8
SMG1P3-202ENST00000437413 THOC2Q8NI27 1593 aaKnown RBP38.72■■■■□ 3.79
SMG1P3-202ENST00000437413 CUX2O14529 1486 aa38.66■■■■□ 3.78
SMG1P3-202ENST00000437413 MRC2Q9UBG0 1479 aa38.66■■■■□ 3.78
SMG1P3-202ENST00000437413 WDR62O43379 1518 aa38.53■■■■□ 3.76
SMG1P3-202ENST00000437413 URB2Q14146 1524 aaKnown RBP38.39■■■■□ 3.74
SMG1P3-202ENST00000437413 ABCC8Q09428 1581 aa38.39■■■■□ 3.74
SMG1P3-202ENST00000437413 DNMBPQ6XZF7 1577 aa38.27■■■■□ 3.72
SMG1P3-202ENST00000437413 TOPBP1Q92547 1522 aa38.25■■■■□ 3.71
SMG1P3-202ENST00000437413 CUX1P39880 1505 aa38.04■■■■□ 3.68
SMG1P3-202ENST00000437413 IFT140Q96RY7 1462 aa37.98■■■■□ 3.67
SMG1P3-202ENST00000437413 WRNQ14191 1432 aaPredicted RBP eCLIP37.96■■■■□ 3.672e-6■■■■□ 22.3
SMG1P3-202ENST00000437413 POLA1P09884 1462 aaPredicted RBP37.94■■■■□ 3.66
SMG1P3-202ENST00000437413 FGD5Q6ZNL6 1462 aa37.88■■■■□ 3.65
SMG1P3-202ENST00000437413 TOP2BQ02880 1626 aa37.87■■■■□ 3.65
SMG1P3-202ENST00000437413 BIVM-ERCC5R4GMW8 1640 aa37.87■■■■□ 3.65
SMG1P3-202ENST00000437413 TARBP1Q13395 1621 aaKnown RBP37.81■■■■□ 3.64
SMG1P3-202ENST00000437413 SYNJ1O43426 1573 aa37.8■■■■□ 3.64
SMG1P3-202ENST00000437413 SOGA1O94964 1423 aa37.79■■■■□ 3.64
SMG1P3-202ENST00000437413 DNAJC5Q9H3Z4 198 aa37.76■■■■□ 3.64
SMG1P3-202ENST00000437413 RAD54L2Q9Y4B4 1467 aa37.7■■■■□ 3.63
SMG1P3-202ENST00000437413 WDR97A6NE52 1622 aa37.69■■■■□ 3.62
SMG1P3-202ENST00000437413 ZNF608Q9ULD9 1512 aaPredicted RBP37.65■■■■□ 3.62
SMG1P3-202ENST00000437413 EIF4G3O43432 1585 aaKnown RBP37.6■■■■□ 3.61
SMG1P3-202ENST00000437413 ABCA10Q8WWZ4 1543 aa37.59■■■■□ 3.61
SMG1P3-202ENST00000437413 AQRO60306 1485 aaKnown RBP eCLIP37.49■■■■□ 3.59
SMG1P3-202ENST00000437413 TDRD9Q8NDG6 1382 aaKnown RBP37.47■■■■□ 3.59
SMG1P3-202ENST00000437413 ABCA5Q8WWZ7 1642 aa37.39■■■■□ 3.58
SMG1P3-202ENST00000437413 GAPVD1Q14C86 1478 aa37.38■■■■□ 3.57
SMG1P3-202ENST00000437413 GRIN2BQ13224 1484 aa37.35■■■■□ 3.57
SMG1P3-202ENST00000437413 PBRM1Q86U86 1689 aa37.28■■■■□ 3.56
SMG1P3-202ENST00000437413 MAGI1Q96QZ7 1491 aaPredicted RBP37.26■■■■□ 3.55
SMG1P3-202ENST00000437413 TRIM41Q8WV44 630 aa37.23■■■■□ 3.55
SMG1P3-202ENST00000437413 SNAPC4Q5SXM2 1469 aa37.2■■■■□ 3.54
SMG1P3-202ENST00000437413 ERICH3Q5RHP9 1530 aa37.18■■■■□ 3.54
SMG1P3-202ENST00000437413 KIF27Q86VH2 1401 aa37.17■■■■□ 3.54
SMG1P3-202ENST00000437413 SYNJ2O15056 1496 aa37.07■■■■□ 3.53
SMG1P3-202ENST00000437413 OSCARQ8IYS5 282 aa37.05■■■■□ 3.52
SMG1P3-202ENST00000437413 CHD1O14646 1710 aa37.05■■■■□ 3.52
SMG1P3-202ENST00000437413 ADAMTS12P58397 1594 aa37■■■■□ 3.51
SMG1P3-202ENST00000437413 CHMP7Q8WUX9 453 aaPredicted RBP36.99■■■■□ 3.51
SMG1P3-202ENST00000437413 FHAD1B1AJZ9 1412 aa36.98■■■■□ 3.51
SMG1P3-202ENST00000437413 FBLN2P98095 1184 aa36.96■■■■□ 3.51
SMG1P3-202ENST00000437413 CHIC1Q5VXU3 224 aa36.94■■■■□ 3.5
SMG1P3-202ENST00000437413 IGF1RP08069 1367 aa36.92■■■■□ 3.5
SMG1P3-202ENST00000437413 CUL7Q14999 1698 aa36.92■■■■□ 3.5
SMG1P3-202ENST00000437413 GRIN2AQ12879 1464 aa36.85■■■■□ 3.49
SMG1P3-202ENST00000437413 RUSC2Q8N2Y8 1516 aa36.77■■■■□ 3.48
SMG1P3-202ENST00000437413 EEA1Q15075 1411 aa36.75■■■■□ 3.47
SMG1P3-202ENST00000437413 CARMIL1Q5VZK9 1371 aa36.73■■■■□ 3.47
SMG1P3-202ENST00000437413 CLASP1Q7Z460 1538 aa36.69■■■■□ 3.46
SMG1P3-202ENST00000437413 NUP160Q12769 1436 aa36.68■■■■□ 3.46
SMG1P3-202ENST00000437413 CEP170Q5SW79 1584 aa36.62■■■■□ 3.45
SMG1P3-202ENST00000437413 RAPGEF2Q9Y4G8 1499 aa36.57■■■■□ 3.45
SMG1P3-202ENST00000437413 CSRNP3Q8WYN3 585 aa36.53■■■■□ 3.44
SMG1P3-202ENST00000437413 PRXQ9BXM0 1461 aa36.51■■■■□ 3.44
SMG1P3-202ENST00000437413 KIAA0586Q9BVV6 1533 aa36.44■■■■□ 3.42
SMG1P3-202ENST00000437413 ARHGEF11O15085 1522 aa36.43■■■■□ 3.42
SMG1P3-202ENST00000437413 SHROOM2Q13796 1616 aa36.4■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms