RNA–Protein interactions for RNA: ENST00000420451.5

HDLBP-207, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-207ENST00000420451 NISCHQ9Y2I1 1504 aa27.03■■□□□ 1.92
HDLBP-207ENST00000420451 CCDC180Q9P1Z9 1646 aa24.33■■□□□ 1.49
HDLBP-207ENST00000420451 ABCC9O60706 1549 aa24.23■■□□□ 1.47
HDLBP-207ENST00000420451 RB1CC1Q8TDY2 1594 aa23.11■■□□□ 1.29
HDLBP-207ENST00000420451 NACADO15069 1562 aa22.96■■□□□ 1.27
HDLBP-207ENST00000420451 DNAJC5BQ9UF47 199 aa22.77■■□□□ 1.24
HDLBP-207ENST00000420451 UNC13AQ9UPW8 1703 aa22.69■■□□□ 1.22
HDLBP-207ENST00000420451 MYO15BQ96JP2 1530 aa22.69■■□□□ 1.22
HDLBP-207ENST00000420451 DCAF8L2P0C7V8 631 aa22.62■■□□□ 1.21
HDLBP-207ENST00000420451 PABPN1Q86U42 306 aaKnown RBP eCLIP22.5■■□□□ 1.19
HDLBP-207ENST00000420451 BICRAQ9NZM4 1560 aa22.5■■□□□ 1.19
HDLBP-207ENST00000420451 ZCCHC6Q5VYS8 1495 aaKnown RBP22.41■■□□□ 1.18
HDLBP-207ENST00000420451 DCAF1Q9Y4B6 1507 aa22.38■■□□□ 1.17
HDLBP-207ENST00000420451 SHROOM4Q9ULL8 1493 aa22.18■■□□□ 1.14
HDLBP-207ENST00000420451 SCRIBQ14160 1630 aa22.08■■□□□ 1.13
HDLBP-207ENST00000420451 CC2D2AQ9P2K1 1620 aa21.95■■□□□ 1.1
HDLBP-207ENST00000420451 EIF4G1Q04637 1599 aaKnown RBP21.91■■□□□ 1.1
HDLBP-207ENST00000420451 CECR2Q9BXF3 1484 aa21.83■■□□□ 1.09
HDLBP-207ENST00000420451 NCAPD3P42695 1498 aa21.19■□□□□ 0.98
HDLBP-207ENST00000420451 SMARCA4P51532 1647 aa21.11■□□□□ 0.97
HDLBP-207ENST00000420451 ATAD2BQ9ULI0 1458 aa21.11■□□□□ 0.97
HDLBP-207ENST00000420451 HMGXB3Q12766 1538 aa21.05■□□□□ 0.96
HDLBP-207ENST00000420451 SMARCA2P51531 1590 aa21.05■□□□□ 0.96
HDLBP-207ENST00000420451 BAZ1AQ9NRL2 1556 aaPredicted RBP20.98■□□□□ 0.95
HDLBP-207ENST00000420451 PEG3Q9GZU2 1588 aa20.95■□□□□ 0.94
HDLBP-207ENST00000420451 CUX2O14529 1486 aa20.94■□□□□ 0.94
HDLBP-207ENST00000420451 DNAJC5Q9H3Z4 198 aa20.91■□□□□ 0.94
HDLBP-207ENST00000420451 ERCC6Q03468 1493 aa20.88■□□□□ 0.93
HDLBP-207ENST00000420451 BAZ1BQ9UIG0 1483 aaKnown RBP20.87■□□□□ 0.93
HDLBP-207ENST00000420451 NESP48681 1621 aa20.84■□□□□ 0.93
HDLBP-207ENST00000420451 MROH2BQ7Z745 1585 aa20.82■□□□□ 0.92
HDLBP-207ENST00000420451 LAMC3Q9Y6N6 1575 aa20.73■□□□□ 0.91
HDLBP-207ENST00000420451 THOC2Q8NI27 1593 aaKnown RBP20.71■□□□□ 0.91
HDLBP-207ENST00000420451 KIF21AQ7Z4S6 1674 aa20.63■□□□□ 0.89
HDLBP-207ENST00000420451 WIZO95785 1651 aa20.58■□□□□ 0.89
HDLBP-207ENST00000420451 PDS5BQ9NTI5 1447 aa20.54■□□□□ 0.88
HDLBP-207ENST00000420451 CADPSQ9ULU8 1353 aa20.5■□□□□ 0.87
HDLBP-207ENST00000420451 WDR62O43379 1518 aa20.39■□□□□ 0.85
HDLBP-207ENST00000420451 MRC2Q9UBG0 1479 aa20.39■□□□□ 0.85
HDLBP-207ENST00000420451 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
HDLBP-207ENST00000420451 TOP2AP11388 1531 aaKnown RBP20.32■□□□□ 0.84
HDLBP-207ENST00000420451 CFTRP13569 1480 aa20.3■□□□□ 0.84
HDLBP-207ENST00000420451 CEP164Q9UPV0 1460 aa20.3■□□□□ 0.84
HDLBP-207ENST00000420451 FANCD2Q9BXW9 1451 aa20.27■□□□□ 0.84
HDLBP-207ENST00000420451 PRDM2Q13029 1718 aa20.18■□□□□ 0.82
HDLBP-207ENST00000420451 URB2Q14146 1524 aaKnown RBP20.13■□□□□ 0.81
HDLBP-207ENST00000420451 CCDC88BA6NC98 1476 aa20.06■□□□□ 0.8
HDLBP-207ENST00000420451 TOPBP1Q92547 1522 aa19.91■□□□□ 0.78
HDLBP-207ENST00000420451 IFT140Q96RY7 1462 aa19.9■□□□□ 0.78
HDLBP-207ENST00000420451 OSCARQ8IYS5 282 aa19.89■□□□□ 0.77
HDLBP-207ENST00000420451 TRIM41Q8WV44 630 aa19.88■□□□□ 0.77
HDLBP-207ENST00000420451 ZNF608Q9ULD9 1512 aaPredicted RBP19.87■□□□□ 0.77
HDLBP-207ENST00000420451 ABCC8Q09428 1581 aa19.86■□□□□ 0.77
HDLBP-207ENST00000420451 DNMBPQ6XZF7 1577 aa19.85■□□□□ 0.77
HDLBP-207ENST00000420451 EIF4G3O43432 1585 aaKnown RBP19.8■□□□□ 0.76
HDLBP-207ENST00000420451 TARBP1Q13395 1621 aaKnown RBP19.79■□□□□ 0.76
HDLBP-207ENST00000420451 RIMBP3CA6NJZ7 1639 aa19.74■□□□□ 0.75
HDLBP-207ENST00000420451 RIMBP3BA6NNM3 1639 aa19.74■□□□□ 0.75
HDLBP-207ENST00000420451 RIMBP3Q9UFD9 1639 aa19.74■□□□□ 0.75
HDLBP-207ENST00000420451 POLA1P09884 1462 aaPredicted RBP19.71■□□□□ 0.75
HDLBP-207ENST00000420451 CHD1O14646 1710 aa19.68■□□□□ 0.74
HDLBP-207ENST00000420451 AQRO60306 1485 aaKnown RBP eCLIP19.66■□□□□ 0.742e-7■■■■□ 25.9
HDLBP-207ENST00000420451 ARHGEF11O15085 1522 aa19.66■□□□□ 0.74
HDLBP-207ENST00000420451 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
HDLBP-207ENST00000420451 WDR97A6NE52 1622 aa19.59■□□□□ 0.73
HDLBP-207ENST00000420451 SOGA1O94964 1423 aa19.57■□□□□ 0.72
HDLBP-207ENST00000420451 CUX1P39880 1505 aa19.56■□□□□ 0.72
HDLBP-207ENST00000420451 FGD5Q6ZNL6 1462 aa19.56■□□□□ 0.72
HDLBP-207ENST00000420451 TDRD9Q8NDG6 1382 aaKnown RBP19.51■□□□□ 0.71
HDLBP-207ENST00000420451 SNAPC4Q5SXM2 1469 aa19.48■□□□□ 0.71
HDLBP-207ENST00000420451 ARAP1Q96P48 1450 aa19.47■□□□□ 0.71
HDLBP-207ENST00000420451 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
HDLBP-207ENST00000420451 MAGI1Q96QZ7 1491 aaPredicted RBP19.45■□□□□ 0.7
HDLBP-207ENST00000420451 FBLN2P98095 1184 aa19.43■□□□□ 0.7
HDLBP-207ENST00000420451 GRIN2BQ13224 1484 aa19.42■□□□□ 0.7
HDLBP-207ENST00000420451 PBRM1Q86U86 1689 aa19.42■□□□□ 0.7
HDLBP-207ENST00000420451 CYB5RLQ6IPT4 315 aa19.41■□□□□ 0.7
HDLBP-207ENST00000420451 SYNJ1O43426 1573 aa19.39■□□□□ 0.69
HDLBP-207ENST00000420451 ABCA5Q8WWZ7 1642 aa19.38■□□□□ 0.69
HDLBP-207ENST00000420451 SYNJ2O15056 1496 aa19.37■□□□□ 0.69
HDLBP-207ENST00000420451 ABCA10Q8WWZ4 1543 aa19.36■□□□□ 0.69
HDLBP-207ENST00000420451 GAPVD1Q14C86 1478 aa19.35■□□□□ 0.69
HDLBP-207ENST00000420451 CHMP7Q8WUX9 453 aaPredicted RBP19.32■□□□□ 0.68
HDLBP-207ENST00000420451 BIVM-ERCC5R4GMW8 1640 aa19.3■□□□□ 0.68
HDLBP-207ENST00000420451 SUPT5HO00267 1087 aaKnown RBP19.29■□□□□ 0.68
HDLBP-207ENST00000420451 TOP2BQ02880 1626 aa19.26■□□□□ 0.67
HDLBP-207ENST00000420451 WRNQ14191 1432 aaPredicted RBP eCLIP19.22■□□□□ 0.67
HDLBP-207ENST00000420451 ADAMTS12P58397 1594 aa19.21■□□□□ 0.67
HDLBP-207ENST00000420451 GRIN2AQ12879 1464 aa19.19■□□□□ 0.66
HDLBP-207ENST00000420451 CEP170Q5SW79 1584 aa19.15■□□□□ 0.66
HDLBP-207ENST00000420451 TRHP20396 242 aaPredicted RBP19.15■□□□□ 0.66
HDLBP-207ENST00000420451 NUP160Q12769 1436 aa19.15■□□□□ 0.66
HDLBP-207ENST00000420451 ERCC6L2Q5T890 1561 aa19.12■□□□□ 0.65
HDLBP-207ENST00000420451 ERICH3Q5RHP9 1530 aa19.12■□□□□ 0.65
HDLBP-207ENST00000420451 SHROOM2Q13796 1616 aa19.11■□□□□ 0.65
HDLBP-207ENST00000420451 FHAD1B1AJZ9 1412 aa19.1■□□□□ 0.65
HDLBP-207ENST00000420451 RUSC2Q8N2Y8 1516 aa18.95■□□□□ 0.62
HDLBP-207ENST00000420451 PRG4Q92954 1404 aaPredicted RBP18.9■□□□□ 0.62
HDLBP-207ENST00000420451 KIF13AQ9H1H9 1805 aa18.88■□□□□ 0.61
HDLBP-207ENST00000420451 JPH4Q96JJ6 628 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms