RNA–Protein interactions for RNA: ENST00000475946.5

RREB1-207, Transcript of ras responsive element binding protein 1, humanhuman

TSL 1 (best)

Gene RREB1, Length 9,067 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RREB1-207ENST00000475946 PELP1Q8IZL8 1130 aaKnown RBP14.26□□□□□ -0.13
RREB1-207ENST00000475946 MYT1Q01538 1121 aa14.22□□□□□ -0.13
RREB1-207ENST00000475946 ERICH6Q7L0X2 663 aa13.61□□□□□ -0.23
RREB1-207ENST00000475946 CCER1Q8TC90 406 aaPredicted RBP13.53□□□□□ -0.24
RREB1-207ENST00000475946 YTHDC1Q96MU7 727 aaKnown RBP13.27□□□□□ -0.28
RREB1-207ENST00000475946 CENPBP07199 599 aaPredicted RBP13.19□□□□□ -0.3
RREB1-207ENST00000475946 TTBK1Q5TCY1 1321 aaPredicted RBP13.16□□□□□ -0.3
RREB1-207ENST00000475946 DCAF8L2P0C7V8 631 aa13.02□□□□□ -0.33
RREB1-207ENST00000475946 ZEB1P37275 1124 aaPredicted RBP12.95□□□□□ -0.34
RREB1-207ENST00000475946 NEFLP07196 543 aa12.92□□□□□ -0.34
RREB1-207ENST00000475946 DAXXQ9UER7 740 aaPredicted RBP12.81□□□□□ -0.36
RREB1-207ENST00000475946 APLP2Q06481 763 aa12.78□□□□□ -0.36
RREB1-207ENST00000475946 SUPT5HO00267 1087 aaKnown RBP12.67□□□□□ -0.38
RREB1-207ENST00000475946 RTL5Q5HYW3 569 aaPredicted RBP12.61□□□□□ -0.39
RREB1-207ENST00000475946 EHMT2Q96KQ7 1210 aa12.52□□□□□ -0.4
RREB1-207ENST00000475946 PCGF6Q9BYE7 350 aa12.51□□□□□ -0.41
RREB1-207ENST00000475946 FAM9AQ8IZU1 332 aaPredicted RBP12.48□□□□□ -0.41
RREB1-207ENST00000475946 ZNF316A6NFI3 1004 aaPredicted RBP12.46□□□□□ -0.41
RREB1-207ENST00000475946 NISCHQ9Y2I1 1504 aa12.43□□□□□ -0.42
RREB1-207ENST00000475946 GLIPR1L2Q4G1C9 344 aa12.38□□□□□ -0.43
RREB1-207ENST00000475946 MYT1LQ9UL68 1186 aa12.33□□□□□ -0.44
RREB1-207ENST00000475946 CLSPNQ9HAW4 1339 aa12.28□□□□□ -0.44
RREB1-207ENST00000475946 EIF5BO60841 1220 aaKnown RBP12.14□□□□□ -0.47
RREB1-207ENST00000475946 SHROOM4Q9ULL8 1493 aa12.07□□□□□ -0.48
RREB1-207ENST00000475946 ANP32BQ92688 251 aaKnown RBP11.99□□□□□ -0.49
RREB1-207ENST00000475946 HRCP23327 699 aa11.96□□□□□ -0.5
RREB1-207ENST00000475946 CDK11AQ9UQ88 783 aaPredicted RBP11.95□□□□□ -0.5
RREB1-207ENST00000475946 RANGAP1P46060 587 aaPredicted RBP11.92□□□□□ -0.5
RREB1-207ENST00000475946 ATP1B4Q9UN42 357 aaPredicted RBP11.92□□□□□ -0.5
RREB1-207ENST00000475946 POLR3GLQ9BT43 218 aa11.88□□□□□ -0.51
RREB1-207ENST00000475946 ANP32AP39687 249 aaKnown RBP11.88□□□□□ -0.51
RREB1-207ENST00000475946 ZBTB47Q9UFB7 747 aaPredicted RBP11.86□□□□□ -0.51
RREB1-207ENST00000475946 TRIM26Q12899 539 aaPredicted RBP11.84□□□□□ -0.51
RREB1-207ENST00000475946 TNNT2P45379 298 aaPredicted RBP11.82□□□□□ -0.52
RREB1-207ENST00000475946 UBTFP17480 764 aaKnown RBP11.77□□□□□ -0.53
RREB1-207ENST00000475946 DIEXFQ68CQ4 756 aaKnown RBP11.76□□□□□ -0.53
RREB1-207ENST00000475946 GTF3C3Q9Y5Q9 886 aa11.76□□□□□ -0.53
RREB1-207ENST00000475946 TRIM41Q8WV44 630 aa11.75□□□□□ -0.53
RREB1-207ENST00000475946 BCANQ96GW7 911 aa11.74□□□□□ -0.53
RREB1-207ENST00000475946 CDK11BP21127 795 aaKnown RBP11.68□□□□□ -0.54
RREB1-207ENST00000475946 CNGB1Q14028 1251 aaPredicted RBP11.68□□□□□ -0.54
RREB1-207ENST00000475946 SLC4A1APQ9BWU0 796 aaKnown RBP11.68□□□□□ -0.54
RREB1-207ENST00000475946 NCLP19338 710 aaKnown RBP11.67□□□□□ -0.54
RREB1-207ENST00000475946 HSP90AA1P07900 732 aaKnown RBP11.64□□□□□ -0.55
RREB1-207ENST00000475946 ANP32EQ9BTT0 268 aa11.64□□□□□ -0.55
RREB1-207ENST00000475946 CANXP27824 592 aaKnown RBP11.64□□□□□ -0.55
RREB1-207ENST00000475946 TRIM44Q96DX7 344 aaPredicted RBP11.62□□□□□ -0.55
RREB1-207ENST00000475946 NEFMP07197 916 aa11.6□□□□□ -0.55
RREB1-207ENST00000475946 NPM2Q86SE8 214 aaKnown RBP11.6□□□□□ -0.55
RREB1-207ENST00000475946 UPF2Q9HAU5 1272 aaKnown RBP11.58□□□□□ -0.56
RREB1-207ENST00000475946 ANP32CO43423 234 aa11.55□□□□□ -0.56
RREB1-207ENST00000475946 PPARGC1BQ86YN6 1023 aaKnown RBP11.53□□□□□ -0.56
RREB1-207ENST00000475946 ITGAEP38570 1179 aa11.52□□□□□ -0.57
RREB1-207ENST00000475946 NBR1Q14596 966 aa11.5□□□□□ -0.57
RREB1-207ENST00000475946 ACIN1Q9UKV3 1341 aaKnown RBP11.49□□□□□ -0.57
RREB1-207ENST00000475946 ARID4BQ4LE39 1312 aaPredicted RBP11.48□□□□□ -0.57
RREB1-207ENST00000475946 BCL11AQ9H165 835 aa11.46□□□□□ -0.57
RREB1-207ENST00000475946 CCDC180Q9P1Z9 1646 aa11.45□□□□□ -0.58
RREB1-207ENST00000475946 ARXQ96QS3 562 aa11.44□□□□□ -0.58
RREB1-207ENST00000475946 HNRNPUL2Q1KMD3 747 aaKnown RBP11.43□□□□□ -0.58
RREB1-207ENST00000475946 ERICH6BQ5W0A0 696 aa11.42□□□□□ -0.58
RREB1-207ENST00000475946 NAP1L5Q96NT1 182 aaPredicted RBP11.38□□□□□ -0.59
RREB1-207ENST00000475946 ZNF326Q5BKZ1 582 aaKnown RBP11.37□□□□□ -0.59
RREB1-207ENST00000475946 SLC24A1O60721 1099 aa11.37□□□□□ -0.59
RREB1-207ENST00000475946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.36□□□□□ -0.59
RREB1-207ENST00000475946 DNTTIP2Q5QJE6 756 aaKnown RBP11.34□□□□□ -0.59
RREB1-207ENST00000475946 CHIC1Q5VXU3 224 aa11.34□□□□□ -0.59
RREB1-207ENST00000475946 PTMAP06454 111 aaKnown RBP11.32□□□□□ -0.6
RREB1-207ENST00000475946 AMER1Q5JTC6 1135 aaPredicted RBP11.32□□□□□ -0.6
RREB1-207ENST00000475946 GOLGA6L22H0YM25 854 aa11.31□□□□□ -0.6
RREB1-207ENST00000475946 DDRGK1Q96HY6 314 aa11.31□□□□□ -0.6
RREB1-207ENST00000475946 FKBP8Q14318 412 aa11.3□□□□□ -0.6
RREB1-207ENST00000475946 BECN1Q14457 450 aa11.29□□□□□ -0.6
RREB1-207ENST00000475946 DCAF1Q9Y4B6 1507 aa11.29□□□□□ -0.6
RREB1-207ENST00000475946 CALRP27797 417 aaKnown RBP11.27□□□□□ -0.6
RREB1-207ENST00000475946 NEUROD1Q13562 356 aa11.26□□□□□ -0.61
RREB1-207ENST00000475946 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.25□□□□□ -0.61
RREB1-207ENST00000475946 ZRSR1Q15695 479 aaKnown RBP11.24□□□□□ -0.61
RREB1-207ENST00000475946 GOLGA6L6A8MZA4 724 aa11.24□□□□□ -0.61
RREB1-207ENST00000475946 CHAF1AQ13111 956 aaPredicted RBP11.23□□□□□ -0.61
RREB1-207ENST00000475946 TNNT3P45378 269 aaPredicted RBP11.23□□□□□ -0.61
RREB1-207ENST00000475946 CCDC136Q96JN2 1154 aa11.22□□□□□ -0.61
RREB1-207ENST00000475946 PTMSP20962 102 aa11.22□□□□□ -0.61
RREB1-207ENST00000475946 TRIM52Q96A61 297 aa11.21□□□□□ -0.62
RREB1-207ENST00000475946 USP35Q9P2H5 1018 aa11.18□□□□□ -0.62
RREB1-207ENST00000475946 NRDCO43847 1150 aa11.18□□□□□ -0.62
RREB1-207ENST00000475946 RTN4Q9NQC3 1192 aaKnown RBP11.17□□□□□ -0.62
RREB1-207ENST00000475946 FAM50AQ14320 339 aaKnown RBP11.17□□□□□ -0.62
RREB1-207ENST00000475946 PPM1GO15355 546 aaPredicted RBP11.16□□□□□ -0.62
RREB1-207ENST00000475946 KAT6BQ8WYB5 2073 aa11.14□□□□□ -0.63
RREB1-207ENST00000475946 MYH16Q9H6N6 1097 aa11.14□□□□□ -0.63
RREB1-207ENST00000475946 L1TD1Q5T7N2 865 aaKnown RBP11.12□□□□□ -0.63
RREB1-207ENST00000475946 MSNP26038 577 aaKnown RBP11.11□□□□□ -0.63
RREB1-207ENST00000475946 HNRNPUQ00839 825 aaKnown RBP eCLIP11.09□□□□□ -0.639e-6■□□□□ 8.1
RREB1-207ENST00000475946 SETQ01105 290 aaPredicted RBP11.06□□□□□ -0.64
RREB1-207ENST00000475946 CFAP44Q96MT7 982 aa11.04□□□□□ -0.64
RREB1-207ENST00000475946 CASC1Q6TDU7 716 aa11.04□□□□□ -0.64
RREB1-207ENST00000475946 LAS1LQ9Y4W2 734 aaKnown RBP11.03□□□□□ -0.64
RREB1-207ENST00000475946 LOC105371045A0A1W2PR82 267 aa11.02□□□□□ -0.65
RREB1-207ENST00000475946 NOP58Q9Y2X3 529 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms