RNA–Protein interactions for RNA: ENST00000421757.5

FNDC3B-204, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best) BASIC

Gene FNDC3B, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-204ENST00000421757 NISCHQ9Y2I1 1504 aa52.03■■■■■ 5.92
FNDC3B-204ENST00000421757 CCDC180Q9P1Z9 1646 aa46.25■■■■■ 4.99
FNDC3B-204ENST00000421757 ABCC9O60706 1549 aa45.52■■■■■ 4.88
FNDC3B-204ENST00000421757 DCAF8L2P0C7V8 631 aa43.73■■■■■ 4.59
FNDC3B-204ENST00000421757 RB1CC1Q8TDY2 1594 aa43.67■■■■■ 4.58
FNDC3B-204ENST00000421757 NACADO15069 1562 aa43.56■■■■■ 4.56
FNDC3B-204ENST00000421757 ZCCHC6Q5VYS8 1495 aaKnown RBP43.3■■■■■ 4.52
FNDC3B-204ENST00000421757 MYO15BQ96JP2 1530 aa43.21■■■■■ 4.51
FNDC3B-204ENST00000421757 DCAF1Q9Y4B6 1507 aa42.99■■■■■ 4.47
FNDC3B-204ENST00000421757 UNC13AQ9UPW8 1703 aa42.6■■■■■ 4.41
FNDC3B-204ENST00000421757 PABPN1Q86U42 306 aaKnown RBP eCLIP42.56■■■■■ 4.4
FNDC3B-204ENST00000421757 BICRAQ9NZM4 1560 aa42.3■■■■■ 4.36
FNDC3B-204ENST00000421757 SCRIBQ14160 1630 aa42.29■■■■■ 4.36
FNDC3B-204ENST00000421757 DNAJC5BQ9UF47 199 aa41.87■■■■■ 4.29
FNDC3B-204ENST00000421757 SHROOM4Q9ULL8 1493 aa41.83■■■■■ 4.29
FNDC3B-204ENST00000421757 EIF4G1Q04637 1599 aaKnown RBP41.24■■■■■ 4.19
FNDC3B-204ENST00000421757 CC2D2AQ9P2K1 1620 aa41.11■■■■■ 4.17
FNDC3B-204ENST00000421757 CECR2Q9BXF3 1484 aa40.89■■■■■ 4.14
FNDC3B-204ENST00000421757 SMARCA4P51532 1647 aa40.39■■■■■ 4.06
FNDC3B-204ENST00000421757 BAZ1AQ9NRL2 1556 aaPredicted RBP40.35■■■■■ 4.05
FNDC3B-204ENST00000421757 ATAD2BQ9ULI0 1458 aa40.22■■■■■ 4.03
FNDC3B-204ENST00000421757 NCAPD3P42695 1498 aa40.2■■■■■ 4.03
FNDC3B-204ENST00000421757 SMARCA2P51531 1590 aa40.17■■■■■ 4.02
FNDC3B-204ENST00000421757 MROH2BQ7Z745 1585 aa40.11■■■■■ 4.01
FNDC3B-204ENST00000421757 HMGXB3Q12766 1538 aa39.97■■■■□ 3.99
FNDC3B-204ENST00000421757 PEG3Q9GZU2 1588 aa39.95■■■■□ 3.99
FNDC3B-204ENST00000421757 BAZ1BQ9UIG0 1483 aaKnown RBP39.92■■■■□ 3.98
FNDC3B-204ENST00000421757 WIZO95785 1651 aa39.67■■■■□ 3.94
FNDC3B-204ENST00000421757 RSF1Q96T23 1441 aaPredicted RBP39.62■■■■□ 3.93
FNDC3B-204ENST00000421757 NESP48681 1621 aa39.32■■■■□ 3.89
FNDC3B-204ENST00000421757 ERCC6Q03468 1493 aa39.27■■■■□ 3.88
FNDC3B-204ENST00000421757 TOP2AP11388 1531 aaKnown RBP39.23■■■■□ 3.87
FNDC3B-204ENST00000421757 LAMC3Q9Y6N6 1575 aa39.16■■■■□ 3.86
FNDC3B-204ENST00000421757 CADPSQ9ULU8 1353 aa39.07■■■■□ 3.84
FNDC3B-204ENST00000421757 PDS5BQ9NTI5 1447 aa38.96■■■■□ 3.83
FNDC3B-204ENST00000421757 KIF21AQ7Z4S6 1674 aa38.81■■■■□ 3.8
FNDC3B-204ENST00000421757 CUX2O14529 1486 aa38.81■■■■□ 3.8
FNDC3B-204ENST00000421757 CCDC88BA6NC98 1476 aa38.79■■■■□ 3.8
FNDC3B-204ENST00000421757 CFTRP13569 1480 aa38.78■■■■□ 3.8
FNDC3B-204ENST00000421757 THOC2Q8NI27 1593 aaKnown RBP38.7■■■■□ 3.79
FNDC3B-204ENST00000421757 SUPT5HO00267 1087 aaKnown RBP38.66■■■■□ 3.78
FNDC3B-204ENST00000421757 FANCD2Q9BXW9 1451 aa38.62■■■■□ 3.77
FNDC3B-204ENST00000421757 CEP164Q9UPV0 1460 aa38.6■■■■□ 3.77
FNDC3B-204ENST00000421757 MRC2Q9UBG0 1479 aa38.54■■■■□ 3.76
FNDC3B-204ENST00000421757 PRDM2Q13029 1718 aa38.41■■■■□ 3.74
FNDC3B-204ENST00000421757 WDR62O43379 1518 aa38.38■■■■□ 3.74
FNDC3B-204ENST00000421757 URB2Q14146 1524 aaKnown RBP38.22■■■■□ 3.71
FNDC3B-204ENST00000421757 TOPBP1Q92547 1522 aa37.97■■■■□ 3.67
FNDC3B-204ENST00000421757 ABCC8Q09428 1581 aa37.97■■■■□ 3.67
FNDC3B-204ENST00000421757 DNMBPQ6XZF7 1577 aa37.9■■■■□ 3.66
FNDC3B-204ENST00000421757 DNAJC5Q9H3Z4 198 aa37.81■■■■□ 3.64
FNDC3B-204ENST00000421757 IFT140Q96RY7 1462 aa37.77■■■■□ 3.64
FNDC3B-204ENST00000421757 POLA1P09884 1462 aaPredicted RBP37.64■■■■□ 3.62
FNDC3B-204ENST00000421757 CUX1P39880 1505 aa37.63■■■■□ 3.61
FNDC3B-204ENST00000421757 ZNF608Q9ULD9 1512 aaPredicted RBP37.61■■■■□ 3.61
FNDC3B-204ENST00000421757 FGD5Q6ZNL6 1462 aa37.55■■■■□ 3.6
FNDC3B-204ENST00000421757 TARBP1Q13395 1621 aaKnown RBP37.53■■■■□ 3.6
FNDC3B-204ENST00000421757 SOGA1O94964 1423 aa37.53■■■■□ 3.6
FNDC3B-204ENST00000421757 RAD54L2Q9Y4B4 1467 aa37.52■■■■□ 3.6
FNDC3B-204ENST00000421757 EIF4G3O43432 1585 aaKnown RBP37.44■■■■□ 3.58
FNDC3B-204ENST00000421757 AQRO60306 1485 aaKnown RBP eCLIP37.42■■■■□ 3.581e-8■□□□□ 10.8
FNDC3B-204ENST00000421757 WRNQ14191 1432 aaPredicted RBP eCLIP37.38■■■■□ 3.57
FNDC3B-204ENST00000421757 TDRD9Q8NDG6 1382 aaKnown RBP37.35■■■■□ 3.57
FNDC3B-204ENST00000421757 OSCARQ8IYS5 282 aa37.27■■■■□ 3.56
FNDC3B-204ENST00000421757 TOP2BQ02880 1626 aa37.26■■■■□ 3.56
FNDC3B-204ENST00000421757 SYNJ1O43426 1573 aa37.25■■■■□ 3.55
FNDC3B-204ENST00000421757 BIVM-ERCC5R4GMW8 1640 aa37.24■■■■□ 3.55
FNDC3B-204ENST00000421757 WDR97A6NE52 1622 aa37.21■■■■□ 3.55
FNDC3B-204ENST00000421757 ABCA10Q8WWZ4 1543 aa37.15■■■■□ 3.54
FNDC3B-204ENST00000421757 FBLN2P98095 1184 aa37.1■■■■□ 3.53
FNDC3B-204ENST00000421757 GRIN2BQ13224 1484 aa37.08■■■■□ 3.53
FNDC3B-204ENST00000421757 GAPVD1Q14C86 1478 aa37.08■■■■□ 3.53
FNDC3B-204ENST00000421757 SNAPC4Q5SXM2 1469 aa37.06■■■■□ 3.52
FNDC3B-204ENST00000421757 ABCA5Q8WWZ7 1642 aa36.99■■■■□ 3.51
FNDC3B-204ENST00000421757 CHD1O14646 1710 aa36.99■■■■□ 3.51
FNDC3B-204ENST00000421757 MAGI1Q96QZ7 1491 aaPredicted RBP36.97■■■■□ 3.51
FNDC3B-204ENST00000421757 PBRM1Q86U86 1689 aa36.96■■■■□ 3.51
FNDC3B-204ENST00000421757 CHMP7Q8WUX9 453 aaPredicted RBP36.94■■■■□ 3.5
FNDC3B-204ENST00000421757 SYNJ2O15056 1496 aa36.85■■■■□ 3.49
FNDC3B-204ENST00000421757 ERICH3Q5RHP9 1530 aa36.7■■■■□ 3.47
FNDC3B-204ENST00000421757 ADAMTS12P58397 1594 aa36.66■■■■□ 3.46
FNDC3B-204ENST00000421757 TRIM41Q8WV44 630 aa36.64■■■■□ 3.46
FNDC3B-204ENST00000421757 FHAD1B1AJZ9 1412 aa36.64■■■■□ 3.46
FNDC3B-204ENST00000421757 KIF27Q86VH2 1401 aa36.62■■■■□ 3.45
FNDC3B-204ENST00000421757 RIMBP3CA6NJZ7 1639 aa36.61■■■■□ 3.45
FNDC3B-204ENST00000421757 RIMBP3BA6NNM3 1639 aa36.61■■■■□ 3.45
FNDC3B-204ENST00000421757 RIMBP3Q9UFD9 1639 aa36.61■■■■□ 3.45
FNDC3B-204ENST00000421757 ARHGEF11O15085 1522 aa36.6■■■■□ 3.45
FNDC3B-204ENST00000421757 GRIN2AQ12879 1464 aa36.6■■■■□ 3.45
FNDC3B-204ENST00000421757 CLASP1Q7Z460 1538 aa36.56■■■■□ 3.44
FNDC3B-204ENST00000421757 IGF1RP08069 1367 aa36.47■■■■□ 3.43
FNDC3B-204ENST00000421757 NUP160Q12769 1436 aa36.42■■■■□ 3.42
FNDC3B-204ENST00000421757 CEP170Q5SW79 1584 aa36.4■■■■□ 3.42
FNDC3B-204ENST00000421757 CYB5RLQ6IPT4 315 aa36.37■■■■□ 3.41
FNDC3B-204ENST00000421757 CUL7Q14999 1698 aa36.34■■■■□ 3.41
FNDC3B-204ENST00000421757 ARAP1Q96P48 1450 aa36.3■■■■□ 3.4
FNDC3B-204ENST00000421757 CARMIL1Q5VZK9 1371 aa36.27■■■■□ 3.4
FNDC3B-204ENST00000421757 RUSC2Q8N2Y8 1516 aa36.24■■■■□ 3.39
FNDC3B-204ENST00000421757 JPH4Q96JJ6 628 aa36.12■■■■□ 3.37
FNDC3B-204ENST00000421757 SHROOM2Q13796 1616 aa36.11■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms