RNA–Protein interactions for RNA: ENST00000441124.5

HDLBP-218, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-218ENST00000441124 NISCHQ9Y2I1 1504 aa47.17■■■■■ 5.14
HDLBP-218ENST00000441124 ABCC9O60706 1549 aa43.54■■■■■ 4.56
HDLBP-218ENST00000441124 CCDC180Q9P1Z9 1646 aa42.54■■■■■ 4.4
HDLBP-218ENST00000441124 DNAJC5BQ9UF47 199 aa41.5■■■■■ 4.23
HDLBP-218ENST00000441124 RB1CC1Q8TDY2 1594 aa40.97■■■■■ 4.15
HDLBP-218ENST00000441124 PABPN1Q86U42 306 aaKnown RBP eCLIP40.49■■■■■ 4.07
HDLBP-218ENST00000441124 NACADO15069 1562 aa40.47■■■■■ 4.07
HDLBP-218ENST00000441124 DCAF8L2P0C7V8 631 aa40.46■■■■■ 4.07
HDLBP-218ENST00000441124 UNC13AQ9UPW8 1703 aa39.9■■■■□ 3.98
HDLBP-218ENST00000441124 BICRAQ9NZM4 1560 aa39.76■■■■□ 3.96
HDLBP-218ENST00000441124 MYO15BQ96JP2 1530 aa39.57■■■■□ 3.93
HDLBP-218ENST00000441124 CECR2Q9BXF3 1484 aa39.26■■■■□ 3.88
HDLBP-218ENST00000441124 CC2D2AQ9P2K1 1620 aa39.18■■■■□ 3.86
HDLBP-218ENST00000441124 SHROOM4Q9ULL8 1493 aa39.1■■■■□ 3.85
HDLBP-218ENST00000441124 ZCCHC6Q5VYS8 1495 aaKnown RBP38.92■■■■□ 3.82
HDLBP-218ENST00000441124 SCRIBQ14160 1630 aa38.9■■■■□ 3.82
HDLBP-218ENST00000441124 EIF4G1Q04637 1599 aaKnown RBP38.9■■■■□ 3.82
HDLBP-218ENST00000441124 DCAF1Q9Y4B6 1507 aa38.81■■■■□ 3.8
HDLBP-218ENST00000441124 DNAJC5Q9H3Z4 198 aa38.63■■■■□ 3.77
HDLBP-218ENST00000441124 CUX2O14529 1486 aa37.72■■■■□ 3.63
HDLBP-218ENST00000441124 ERCC6Q03468 1493 aa37.67■■■■□ 3.62
HDLBP-218ENST00000441124 NCAPD3P42695 1498 aa37.39■■■■□ 3.58
HDLBP-218ENST00000441124 ATAD2BQ9ULI0 1458 aa37.22■■■■□ 3.55
HDLBP-218ENST00000441124 NESP48681 1621 aa37.15■■■■□ 3.54
HDLBP-218ENST00000441124 SMARCA2P51531 1590 aa37.04■■■■□ 3.52
HDLBP-218ENST00000441124 HMGXB3Q12766 1538 aa37.02■■■■□ 3.52
HDLBP-218ENST00000441124 SMARCA4P51532 1647 aa36.94■■■■□ 3.5
HDLBP-218ENST00000441124 BAZ1BQ9UIG0 1483 aaKnown RBP36.86■■■■□ 3.49
HDLBP-218ENST00000441124 TRIM41Q8WV44 630 aa36.82■■■■□ 3.48
HDLBP-218ENST00000441124 THOC2Q8NI27 1593 aaKnown RBP36.81■■■■□ 3.48
HDLBP-218ENST00000441124 BAZ1AQ9NRL2 1556 aaPredicted RBP36.66■■■■□ 3.46
HDLBP-218ENST00000441124 LAMC3Q9Y6N6 1575 aa36.66■■■■□ 3.46
HDLBP-218ENST00000441124 PDS5BQ9NTI5 1447 aa36.57■■■■□ 3.44
HDLBP-218ENST00000441124 KIF21AQ7Z4S6 1674 aa36.53■■■■□ 3.44
HDLBP-218ENST00000441124 PEG3Q9GZU2 1588 aa36.5■■■■□ 3.43
HDLBP-218ENST00000441124 MROH2BQ7Z745 1585 aa36.38■■■■□ 3.41
HDLBP-218ENST00000441124 CADPSQ9ULU8 1353 aa36.29■■■■□ 3.4
HDLBP-218ENST00000441124 MRC2Q9UBG0 1479 aa36.29■■■■□ 3.4
HDLBP-218ENST00000441124 WDR62O43379 1518 aa36.15■■■■□ 3.38
HDLBP-218ENST00000441124 CEP164Q9UPV0 1460 aa36■■■■□ 3.35
HDLBP-218ENST00000441124 OSCARQ8IYS5 282 aa35.98■■■■□ 3.35
HDLBP-218ENST00000441124 FANCD2Q9BXW9 1451 aa35.9■■■■□ 3.34
HDLBP-218ENST00000441124 WIZO95785 1651 aa35.88■■■■□ 3.33
HDLBP-218ENST00000441124 CFTRP13569 1480 aa35.67■■■■□ 3.3
HDLBP-218ENST00000441124 URB2Q14146 1524 aaKnown RBP35.62■■■■□ 3.29
HDLBP-218ENST00000441124 RIMBP3CA6NJZ7 1639 aa35.5■■■■□ 3.27
HDLBP-218ENST00000441124 RIMBP3BA6NNM3 1639 aa35.5■■■■□ 3.27
HDLBP-218ENST00000441124 RIMBP3Q9UFD9 1639 aa35.5■■■■□ 3.27
HDLBP-218ENST00000441124 TOP2AP11388 1531 aaKnown RBP35.37■■■■□ 3.25
HDLBP-218ENST00000441124 RSF1Q96T23 1441 aaPredicted RBP35.35■■■■□ 3.25
HDLBP-218ENST00000441124 ZNF608Q9ULD9 1512 aaPredicted RBP35.35■■■■□ 3.25
HDLBP-218ENST00000441124 ARHGEF11O15085 1522 aa35.34■■■■□ 3.25
HDLBP-218ENST00000441124 IFT140Q96RY7 1462 aa35.29■■■■□ 3.24
HDLBP-218ENST00000441124 CYB5RLQ6IPT4 315 aa35.27■■■■□ 3.24
HDLBP-218ENST00000441124 TRHP20396 242 aaPredicted RBP35.19■■■■□ 3.22
HDLBP-218ENST00000441124 TOPBP1Q92547 1522 aa35.11■■■■□ 3.21
HDLBP-218ENST00000441124 PRDM2Q13029 1718 aa35.08■■■■□ 3.21
HDLBP-218ENST00000441124 EIF4G3O43432 1585 aaKnown RBP35.04■■■■□ 3.2
HDLBP-218ENST00000441124 FBLN2P98095 1184 aa35.03■■■■□ 3.2
HDLBP-218ENST00000441124 CCDC88BA6NC98 1476 aa35.03■■■■□ 3.2
HDLBP-218ENST00000441124 AQRO60306 1485 aaKnown RBP eCLIP34.97■■■■□ 3.192e-16■■■■□ 25
HDLBP-218ENST00000441124 ARAP1Q96P48 1450 aa34.95■■■■□ 3.19
HDLBP-218ENST00000441124 ABCC8Q09428 1581 aa34.93■■■■□ 3.18
HDLBP-218ENST00000441124 CHD1O14646 1710 aa34.89■■■■□ 3.18
HDLBP-218ENST00000441124 DNMBPQ6XZF7 1577 aa34.87■■■■□ 3.17
HDLBP-218ENST00000441124 TARBP1Q13395 1621 aaKnown RBP34.77■■■■□ 3.16
HDLBP-218ENST00000441124 AEBP2Q6ZN18 517 aaPredicted RBP34.73■■■■□ 3.15
HDLBP-218ENST00000441124 POLA1P09884 1462 aaPredicted RBP34.7■■■■□ 3.15
HDLBP-218ENST00000441124 TDRD9Q8NDG6 1382 aaKnown RBP34.66■■■■□ 3.14
HDLBP-218ENST00000441124 RAD54L2Q9Y4B4 1467 aa34.65■■■■□ 3.14
HDLBP-218ENST00000441124 SOGA1O94964 1423 aa34.58■■■■□ 3.13
HDLBP-218ENST00000441124 CHMP7Q8WUX9 453 aaPredicted RBP34.57■■■■□ 3.12
HDLBP-218ENST00000441124 SNAPC4Q5SXM2 1469 aa34.57■■■■□ 3.12
HDLBP-218ENST00000441124 CLASP1Q7Z460 1538 aa34.48■■■■□ 3.11
HDLBP-218ENST00000441124 SYNJ1O43426 1573 aa34.44■■■■□ 3.1
HDLBP-218ENST00000441124 FGD5Q6ZNL6 1462 aa34.4■■■■□ 3.1
HDLBP-218ENST00000441124 MAGI1Q96QZ7 1491 aaPredicted RBP34.37■■■■□ 3.09
HDLBP-218ENST00000441124 GRIN2BQ13224 1484 aa34.33■■■■□ 3.09
HDLBP-218ENST00000441124 WDR97A6NE52 1622 aa34.3■■■■□ 3.08
HDLBP-218ENST00000441124 SYNJ2O15056 1496 aa34.29■■■■□ 3.08
HDLBP-218ENST00000441124 GAPVD1Q14C86 1478 aa34.27■■■■□ 3.08
HDLBP-218ENST00000441124 CUX1P39880 1505 aa34.22■■■■□ 3.07
HDLBP-218ENST00000441124 PBRM1Q86U86 1689 aa34.05■■■■□ 3.04
HDLBP-218ENST00000441124 ERCC6L2Q5T890 1561 aa33.97■■■■□ 3.03
HDLBP-218ENST00000441124 ABCA10Q8WWZ4 1543 aa33.91■■■■□ 3.02
HDLBP-218ENST00000441124 ABCA5Q8WWZ7 1642 aa33.89■■■■□ 3.02
HDLBP-218ENST00000441124 GRIN2AQ12879 1464 aa33.88■■■■□ 3.01
HDLBP-218ENST00000441124 CEP170Q5SW79 1584 aa33.82■■■■□ 3
HDLBP-218ENST00000441124 NUP160Q12769 1436 aa33.76■■■□□ 2.99
HDLBP-218ENST00000441124 ADAMTS12P58397 1594 aa33.72■■■□□ 2.99
HDLBP-218ENST00000441124 WRNQ14191 1432 aaPredicted RBP eCLIP33.7■■■□□ 2.98
HDLBP-218ENST00000441124 FHAD1B1AJZ9 1412 aa33.65■■■□□ 2.98
HDLBP-218ENST00000441124 SHROOM2Q13796 1616 aa33.62■■■□□ 2.97
HDLBP-218ENST00000441124 PRG4Q92954 1404 aaPredicted RBP33.6■■■□□ 2.97
HDLBP-218ENST00000441124 FAM69CQ0P6D2 419 aa33.57■■■□□ 2.96
HDLBP-218ENST00000441124 KIF13AQ9H1H9 1805 aa33.57■■■□□ 2.96
HDLBP-218ENST00000441124 JPH4Q96JJ6 628 aa33.52■■■□□ 2.96
HDLBP-218ENST00000441124 NPM1P06748 294 aaKnown RBP eCLIP33.51■■■□□ 2.95
HDLBP-218ENST00000441124 ERICH3Q5RHP9 1530 aa33.45■■■□□ 2.95
HDLBP-218ENST00000441124 SUPT5HO00267 1087 aaKnown RBP33.45■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms