RNA–Protein interactions for RNA: ENST00000426105.6

PUM1-206, Transcript of pumilio RNA binding family member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUM1, Length 4,043 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-206ENST00000426105 NISCHQ9Y2I1 1504 aa13.93□□□□□ -0.18
PUM1-206ENST00000426105 DCAF8L2P0C7V8 631 aa13.51□□□□□ -0.25
PUM1-206ENST00000426105 ABCC9O60706 1549 aa12.72□□□□□ -0.37
PUM1-206ENST00000426105 SHROOM4Q9ULL8 1493 aa12.38□□□□□ -0.43
PUM1-206ENST00000426105 PABPN1Q86U42 306 aaKnown RBP eCLIP12.33□□□□□ -0.44
PUM1-206ENST00000426105 CCDC180Q9P1Z9 1646 aa12.09□□□□□ -0.47
PUM1-206ENST00000426105 SUPT5HO00267 1087 aaKnown RBP11.95□□□□□ -0.5
PUM1-206ENST00000426105 RB1CC1Q8TDY2 1594 aa11.61□□□□□ -0.55
PUM1-206ENST00000426105 SCRIBQ14160 1630 aa11.59□□□□□ -0.55
PUM1-206ENST00000426105 DNAJC5BQ9UF47 199 aa11.55□□□□□ -0.56
PUM1-206ENST00000426105 EHMT2Q96KQ7 1210 aa11.51□□□□□ -0.57
PUM1-206ENST00000426105 ZCCHC6Q5VYS8 1495 aaKnown RBP11.5□□□□□ -0.57
PUM1-206ENST00000426105 NACADO15069 1562 aa11.45□□□□□ -0.58
PUM1-206ENST00000426105 DCAF1Q9Y4B6 1507 aa11.37□□□□□ -0.59
PUM1-206ENST00000426105 MYO15BQ96JP2 1530 aa11.33□□□□□ -0.6
PUM1-206ENST00000426105 TTBK1Q5TCY1 1321 aaPredicted RBP11.27□□□□□ -0.61
PUM1-206ENST00000426105 RANGAP1P46060 587 aaPredicted RBP11.26□□□□□ -0.61
PUM1-206ENST00000426105 FBLN2P98095 1184 aa11.26□□□□□ -0.61
PUM1-206ENST00000426105 FAM9AQ8IZU1 332 aaPredicted RBP11.25□□□□□ -0.61
PUM1-206ENST00000426105 CECR2Q9BXF3 1484 aa11.23□□□□□ -0.61
PUM1-206ENST00000426105 ERCC6Q03468 1493 aa11.13□□□□□ -0.63
PUM1-206ENST00000426105 TRIM41Q8WV44 630 aa11.02□□□□□ -0.64
PUM1-206ENST00000426105 BAZ1BQ9UIG0 1483 aaKnown RBP11.01□□□□□ -0.65
PUM1-206ENST00000426105 ATP1B4Q9UN42 357 aaPredicted RBP11□□□□□ -0.65
PUM1-206ENST00000426105 EIF4G1Q04637 1599 aaKnown RBP10.94□□□□□ -0.66
PUM1-206ENST00000426105 UNC13AQ9UPW8 1703 aa10.93□□□□□ -0.66
PUM1-206ENST00000426105 CC2D2AQ9P2K1 1620 aa10.92□□□□□ -0.66
PUM1-206ENST00000426105 BICRAQ9NZM4 1560 aa10.91□□□□□ -0.66
PUM1-206ENST00000426105 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.87□□□□□ -0.67
PUM1-206ENST00000426105 HNRNPUL2Q1KMD3 747 aaKnown RBP10.87□□□□□ -0.67
PUM1-206ENST00000426105 MROH2BQ7Z745 1585 aa10.87□□□□□ -0.67
PUM1-206ENST00000426105 RSF1Q96T23 1441 aaPredicted RBP10.87□□□□□ -0.67
PUM1-206ENST00000426105 UBTFP17480 764 aaKnown RBP10.87□□□□□ -0.67
PUM1-206ENST00000426105 ATAD2BQ9ULI0 1458 aa10.84□□□□□ -0.67
PUM1-206ENST00000426105 BAZ1AQ9NRL2 1556 aaPredicted RBP10.84□□□□□ -0.67
PUM1-206ENST00000426105 ARID3CA6NKF2 412 aa10.82□□□□□ -0.68
PUM1-206ENST00000426105 CHMP7Q8WUX9 453 aaPredicted RBP10.82□□□□□ -0.68
PUM1-206ENST00000426105 TRHP20396 242 aaPredicted RBP10.81□□□□□ -0.68
PUM1-206ENST00000426105 NESP48681 1621 aa10.8□□□□□ -0.68
PUM1-206ENST00000426105 SMARCA2P51531 1590 aa10.77□□□□□ -0.69
PUM1-206ENST00000426105 PDS5BQ9NTI5 1447 aa10.76□□□□□ -0.69
PUM1-206ENST00000426105 CADPSQ9ULU8 1353 aa10.74□□□□□ -0.69
PUM1-206ENST00000426105 P3H3Q8IVL6 736 aa10.73□□□□□ -0.69
PUM1-206ENST00000426105 MYT1LQ9UL68 1186 aa10.72□□□□□ -0.69
PUM1-206ENST00000426105 CYB5RLQ6IPT4 315 aa10.69□□□□□ -0.7
PUM1-206ENST00000426105 SMARCA4P51532 1647 aa10.68□□□□□ -0.7
PUM1-206ENST00000426105 NCAPD3P42695 1498 aa10.68□□□□□ -0.7
PUM1-206ENST00000426105 WIZO95785 1651 aa10.68□□□□□ -0.7
PUM1-206ENST00000426105 TDRD9Q8NDG6 1382 aaKnown RBP10.68□□□□□ -0.7
PUM1-206ENST00000426105 OSCARQ8IYS5 282 aa10.64□□□□□ -0.71
PUM1-206ENST00000426105 NPM1P06748 294 aaKnown RBP eCLIP10.63□□□□□ -0.71
PUM1-206ENST00000426105 APLP2Q06481 763 aa10.62□□□□□ -0.71
PUM1-206ENST00000426105 CCDC88BA6NC98 1476 aa10.62□□□□□ -0.71
PUM1-206ENST00000426105 PLPPR3Q6T4P5 718 aa10.62□□□□□ -0.71
PUM1-206ENST00000426105 FANCD2Q9BXW9 1451 aa10.6□□□□□ -0.71
PUM1-206ENST00000426105 CEP164Q9UPV0 1460 aa10.6□□□□□ -0.71
PUM1-206ENST00000426105 CHIC1Q5VXU3 224 aa10.58□□□□□ -0.72
PUM1-206ENST00000426105 PPARGC1BQ86YN6 1023 aaKnown RBP10.55□□□□□ -0.72
PUM1-206ENST00000426105 LOC105371045A0A1W2PR82 267 aa10.53□□□□□ -0.72
PUM1-206ENST00000426105 SOGA1O94964 1423 aa10.53□□□□□ -0.72
PUM1-206ENST00000426105 KCNH8Q96L42 1107 aa10.51□□□□□ -0.73
PUM1-206ENST00000426105 WRNQ14191 1432 aaPredicted RBP eCLIP10.49□□□□□ -0.731e-10■□□□□ 9.9
PUM1-206ENST00000426105 AQRO60306 1485 aaKnown RBP eCLIP10.48□□□□□ -0.737e-7■■■■■ 33.4
PUM1-206ENST00000426105 PEG3Q9GZU2 1588 aa10.47□□□□□ -0.73
PUM1-206ENST00000426105 CSRNP3Q8WYN3 585 aa10.46□□□□□ -0.73
PUM1-206ENST00000426105 TOP2AP11388 1531 aaKnown RBP10.46□□□□□ -0.74
PUM1-206ENST00000426105 RAD54L2Q9Y4B4 1467 aa10.45□□□□□ -0.74
PUM1-206ENST00000426105 CUX2O14529 1486 aa10.45□□□□□ -0.74
PUM1-206ENST00000426105 AEBP2Q6ZN18 517 aaPredicted RBP10.44□□□□□ -0.74
PUM1-206ENST00000426105 HMGXB3Q12766 1538 aa10.43□□□□□ -0.74
PUM1-206ENST00000426105 MRC2Q9UBG0 1479 aa10.41□□□□□ -0.74
PUM1-206ENST00000426105 ITGAEP38570 1179 aa10.41□□□□□ -0.74
PUM1-206ENST00000426105 ABCC8Q09428 1581 aa10.4□□□□□ -0.74
PUM1-206ENST00000426105 ZNF777Q9ULD5 760 aaPredicted RBP10.39□□□□□ -0.75
PUM1-206ENST00000426105 DNAJC5Q9H3Z4 198 aa10.38□□□□□ -0.75
PUM1-206ENST00000426105 CFTRP13569 1480 aa10.37□□□□□ -0.75
PUM1-206ENST00000426105 JPH4Q96JJ6 628 aa10.36□□□□□ -0.75
PUM1-206ENST00000426105 FGD5Q6ZNL6 1462 aa10.32□□□□□ -0.76
PUM1-206ENST00000426105 KIF27Q86VH2 1401 aa10.32□□□□□ -0.76
PUM1-206ENST00000426105 ZNF608Q9ULD9 1512 aaPredicted RBP10.31□□□□□ -0.76
PUM1-206ENST00000426105 ARID4BQ4LE39 1312 aaPredicted RBP10.3□□□□□ -0.76
PUM1-206ENST00000426105 LAMC3Q9Y6N6 1575 aa10.3□□□□□ -0.76
PUM1-206ENST00000426105 CARMIL1Q5VZK9 1371 aa10.3□□□□□ -0.76
PUM1-206ENST00000426105 TOPBP1Q92547 1522 aa10.28□□□□□ -0.76
PUM1-206ENST00000426105 FAM69CQ0P6D2 419 aa10.26□□□□□ -0.77
PUM1-206ENST00000426105 URB2Q14146 1524 aaKnown RBP10.26□□□□□ -0.77
PUM1-206ENST00000426105 GAPVD1Q14C86 1478 aa10.26□□□□□ -0.77
PUM1-206ENST00000426105 MLECQ14165 292 aa10.25□□□□□ -0.77
PUM1-206ENST00000426105 POLA1P09884 1462 aaPredicted RBP10.24□□□□□ -0.77
PUM1-206ENST00000426105 ESF1Q9H501 851 aaKnown RBP10.23□□□□□ -0.77
PUM1-206ENST00000426105 IFT140Q96RY7 1462 aa10.22□□□□□ -0.77
PUM1-206ENST00000426105 SENP3Q9H4L4 574 aaPredicted RBP10.22□□□□□ -0.77
PUM1-206ENST00000426105 CDK11AQ9UQ88 783 aaPredicted RBP10.21□□□□□ -0.77
PUM1-206ENST00000426105 PLEKHD1A6NEE1 506 aa10.21□□□□□ -0.78
PUM1-206ENST00000426105 FAM50AQ14320 339 aaKnown RBP10.21□□□□□ -0.78
PUM1-206ENST00000426105 SNAPC4Q5SXM2 1469 aa10.2□□□□□ -0.78
PUM1-206ENST00000426105 GRIN2BQ13224 1484 aa10.16□□□□□ -0.78
PUM1-206ENST00000426105 KIF21AQ7Z4S6 1674 aa10.16□□□□□ -0.78
PUM1-206ENST00000426105 RUSC2Q8N2Y8 1516 aa10.15□□□□□ -0.79
PUM1-206ENST00000426105 PTPRGP23470 1445 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms