RNA–Protein interactions for RNA: ENST00000419093.5

LSS-203, Transcript of lanosterol synthase, humanhuman

TSL 3

Gene LSS, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-203ENST00000419093 NISCHQ9Y2I1 1504 aa23.02■■□□□ 1.28
LSS-203ENST00000419093 ABCC9O60706 1549 aa20.7■□□□□ 0.9
LSS-203ENST00000419093 CCDC180Q9P1Z9 1646 aa20.35■□□□□ 0.85
LSS-203ENST00000419093 DNAJC5BQ9UF47 199 aa19.93■□□□□ 0.78
LSS-203ENST00000419093 RB1CC1Q8TDY2 1594 aa19.59■□□□□ 0.73
LSS-203ENST00000419093 NACADO15069 1562 aa19.36■□□□□ 0.69
LSS-203ENST00000419093 ZCCHC6Q5VYS8 1495 aaKnown RBP19.23■□□□□ 0.67
LSS-203ENST00000419093 DCAF8L2P0C7V8 631 aa19.19■□□□□ 0.66
LSS-203ENST00000419093 PABPN1Q86U42 306 aaKnown RBP eCLIP19.15■□□□□ 0.661e-7■□□□□ 8.7
LSS-203ENST00000419093 UNC13AQ9UPW8 1703 aa19.14■□□□□ 0.65
LSS-203ENST00000419093 DCAF1Q9Y4B6 1507 aa19.1■□□□□ 0.65
LSS-203ENST00000419093 MYO15BQ96JP2 1530 aa19.05■□□□□ 0.64
LSS-203ENST00000419093 BICRAQ9NZM4 1560 aa19.02■□□□□ 0.64
LSS-203ENST00000419093 SHROOM4Q9ULL8 1493 aa18.84■□□□□ 0.61
LSS-203ENST00000419093 DNAJC5Q9H3Z4 198 aa18.79■□□□□ 0.6
LSS-203ENST00000419093 CECR2Q9BXF3 1484 aa18.77■□□□□ 0.59
LSS-203ENST00000419093 CC2D2AQ9P2K1 1620 aa18.74■□□□□ 0.59
LSS-203ENST00000419093 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
LSS-203ENST00000419093 SCRIBQ14160 1630 aa18.48■□□□□ 0.55
LSS-203ENST00000419093 CUX2O14529 1486 aa18.2■□□□□ 0.5
LSS-203ENST00000419093 ERCC6Q03468 1493 aa17.94■□□□□ 0.46
LSS-203ENST00000419093 NCAPD3P42695 1498 aa17.88■□□□□ 0.45
LSS-203ENST00000419093 BAZ1AQ9NRL2 1556 aaPredicted RBP17.83■□□□□ 0.45
LSS-203ENST00000419093 SMARCA4P51532 1647 aa17.73■□□□□ 0.43
LSS-203ENST00000419093 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
LSS-203ENST00000419093 MROH2BQ7Z745 1585 aa17.7■□□□□ 0.42
LSS-203ENST00000419093 HMGXB3Q12766 1538 aa17.69■□□□□ 0.42
LSS-203ENST00000419093 ATAD2BQ9ULI0 1458 aa17.69■□□□□ 0.42
LSS-203ENST00000419093 SMARCA2P51531 1590 aa17.65■□□□□ 0.42
LSS-203ENST00000419093 THOC2Q8NI27 1593 aaKnown RBP17.64■□□□□ 0.41
LSS-203ENST00000419093 NESP48681 1621 aa17.63■□□□□ 0.41
LSS-203ENST00000419093 SUPT5HO00267 1087 aaKnown RBP17.61■□□□□ 0.41
LSS-203ENST00000419093 PEG3Q9GZU2 1588 aa17.58■□□□□ 0.41
LSS-203ENST00000419093 TRIM41Q8WV44 630 aa17.56■□□□□ 0.4
LSS-203ENST00000419093 LAMC3Q9Y6N6 1575 aa17.55■□□□□ 0.4
LSS-203ENST00000419093 WIZO95785 1651 aa17.5■□□□□ 0.39
LSS-203ENST00000419093 BAZ1BQ9UIG0 1483 aaKnown RBP17.49■□□□□ 0.39
LSS-203ENST00000419093 PDS5BQ9NTI5 1447 aa17.45■□□□□ 0.38
LSS-203ENST00000419093 KIF21AQ7Z4S6 1674 aa17.43■□□□□ 0.38
LSS-203ENST00000419093 TOP2AP11388 1531 aaKnown RBP17.39■□□□□ 0.37
LSS-203ENST00000419093 WDR62O43379 1518 aa17.3■□□□□ 0.36
LSS-203ENST00000419093 MRC2Q9UBG0 1479 aa17.3■□□□□ 0.36
LSS-203ENST00000419093 CADPSQ9ULU8 1353 aa17.27■□□□□ 0.35
LSS-203ENST00000419093 OSCARQ8IYS5 282 aa17.24■□□□□ 0.35
LSS-203ENST00000419093 CCDC88BA6NC98 1476 aa17.21■□□□□ 0.35
LSS-203ENST00000419093 CEP164Q9UPV0 1460 aa17.11■□□□□ 0.33
LSS-203ENST00000419093 RIMBP3CA6NJZ7 1639 aa17.04■□□□□ 0.32
LSS-203ENST00000419093 RIMBP3BA6NNM3 1639 aa17.04■□□□□ 0.32
LSS-203ENST00000419093 RIMBP3Q9UFD9 1639 aa17.04■□□□□ 0.32
LSS-203ENST00000419093 CFTRP13569 1480 aa17.03■□□□□ 0.32
LSS-203ENST00000419093 FANCD2Q9BXW9 1451 aa17.03■□□□□ 0.32
LSS-203ENST00000419093 ARHGEF11O15085 1522 aa16.94■□□□□ 0.3
LSS-203ENST00000419093 URB2Q14146 1524 aaKnown RBP16.92■□□□□ 0.3
LSS-203ENST00000419093 IFT140Q96RY7 1462 aa16.82■□□□□ 0.28
LSS-203ENST00000419093 PRDM2Q13029 1718 aa16.81■□□□□ 0.28
LSS-203ENST00000419093 CYB5RLQ6IPT4 315 aa16.79■□□□□ 0.28
LSS-203ENST00000419093 ZNF608Q9ULD9 1512 aaPredicted RBP16.77■□□□□ 0.28
LSS-203ENST00000419093 TRHP20396 242 aaPredicted RBP16.75■□□□□ 0.27
LSS-203ENST00000419093 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
LSS-203ENST00000419093 ARAP1Q96P48 1450 aa16.72■□□□□ 0.27
LSS-203ENST00000419093 WRNQ14191 1432 aaPredicted RBP eCLIP16.7■□□□□ 0.264e-8■■■□□ 14.6
LSS-203ENST00000419093 AEBP2Q6ZN18 517 aaPredicted RBP16.69■□□□□ 0.26
LSS-203ENST00000419093 EIF4G3O43432 1585 aaKnown RBP16.68■□□□□ 0.26
LSS-203ENST00000419093 TOPBP1Q92547 1522 aa16.66■□□□□ 0.26
LSS-203ENST00000419093 CHD1O14646 1710 aa16.66■□□□□ 0.26
LSS-203ENST00000419093 CHIC1Q5VXU3 224 aa16.65■□□□□ 0.26
LSS-203ENST00000419093 DNMBPQ6XZF7 1577 aa16.6■□□□□ 0.25
LSS-203ENST00000419093 CUX1P39880 1505 aa16.59■□□□□ 0.25
LSS-203ENST00000419093 TARBP1Q13395 1621 aaKnown RBP16.58■□□□□ 0.24
LSS-203ENST00000419093 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
LSS-203ENST00000419093 AQRO60306 1485 aaKnown RBP eCLIP16.55■□□□□ 0.245e-9■■■■■ 29.1
LSS-203ENST00000419093 SYNJ1O43426 1573 aa16.53■□□□□ 0.24
LSS-203ENST00000419093 BIVM-ERCC5R4GMW8 1640 aa16.52■□□□□ 0.24
LSS-203ENST00000419093 CLASP1Q7Z460 1538 aa16.5■□□□□ 0.23
LSS-203ENST00000419093 FGD5Q6ZNL6 1462 aa16.49■□□□□ 0.23
LSS-203ENST00000419093 SOGA1O94964 1423 aa16.49■□□□□ 0.23
LSS-203ENST00000419093 POLA1P09884 1462 aaPredicted RBP16.48■□□□□ 0.23
LSS-203ENST00000419093 FBLN2P98095 1184 aa16.48■□□□□ 0.23
LSS-203ENST00000419093 WDR97A6NE52 1622 aa16.47■□□□□ 0.23
LSS-203ENST00000419093 MAGI1Q96QZ7 1491 aaPredicted RBP16.39■□□□□ 0.21
LSS-203ENST00000419093 RAD54L2Q9Y4B4 1467 aa16.39■□□□□ 0.21
LSS-203ENST00000419093 ABCA10Q8WWZ4 1543 aa16.38■□□□□ 0.21
LSS-203ENST00000419093 KIF27Q86VH2 1401 aa16.36■□□□□ 0.21
LSS-203ENST00000419093 SNAPC4Q5SXM2 1469 aa16.36■□□□□ 0.21
LSS-203ENST00000419093 CHMP7Q8WUX9 453 aaPredicted RBP16.36■□□□□ 0.21
LSS-203ENST00000419093 TDRD9Q8NDG6 1382 aaKnown RBP16.36■□□□□ 0.21
LSS-203ENST00000419093 EEA1Q15075 1411 aa16.34■□□□□ 0.21
LSS-203ENST00000419093 SYNJ2O15056 1496 aa16.33■□□□□ 0.2
LSS-203ENST00000419093 GAPVD1Q14C86 1478 aa16.33■□□□□ 0.2
LSS-203ENST00000419093 GRIN2BQ13224 1484 aa16.3■□□□□ 0.2
LSS-203ENST00000419093 CSRNP3Q8WYN3 585 aa16.27■□□□□ 0.2
LSS-203ENST00000419093 FAM9AQ8IZU1 332 aaPredicted RBP16.24■□□□□ 0.19
LSS-203ENST00000419093 IGF1RP08069 1367 aa16.23■□□□□ 0.19
LSS-203ENST00000419093 ABCA5Q8WWZ7 1642 aa16.21■□□□□ 0.19
LSS-203ENST00000419093 ERICH3Q5RHP9 1530 aa16.2■□□□□ 0.18
LSS-203ENST00000419093 RUSC2Q8N2Y8 1516 aa16.2■□□□□ 0.18
LSS-203ENST00000419093 PBRM1Q86U86 1689 aa16.18■□□□□ 0.18
LSS-203ENST00000419093 CARMIL1Q5VZK9 1371 aa16.16■□□□□ 0.18
LSS-203ENST00000419093 KIF13AQ9H1H9 1805 aa16.16■□□□□ 0.18
LSS-203ENST00000419093 FHAD1B1AJZ9 1412 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms