RNA–Protein interactions for RNA: ENST00000498419.5

PUM1-211, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 5

Gene PUM1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-211ENST00000498419 NISCHQ9Y2I1 1504 aa14.58□□□□□ -0.07
PUM1-211ENST00000498419 CCDC180Q9P1Z9 1646 aa12.48□□□□□ -0.41
PUM1-211ENST00000498419 DCAF8L2P0C7V8 631 aa12.46□□□□□ -0.41
PUM1-211ENST00000498419 SHROOM4Q9ULL8 1493 aa12.3□□□□□ -0.44
PUM1-211ENST00000498419 ZCCHC6Q5VYS8 1495 aaKnown RBP12.23□□□□□ -0.45
PUM1-211ENST00000498419 ABCC9O60706 1549 aa12.16□□□□□ -0.46
PUM1-211ENST00000498419 DCAF1Q9Y4B6 1507 aa11.88□□□□□ -0.51
PUM1-211ENST00000498419 SUPT5HO00267 1087 aaKnown RBP11.86□□□□□ -0.51
PUM1-211ENST00000498419 SCRIBQ14160 1630 aa11.77□□□□□ -0.52
PUM1-211ENST00000498419 NACADO15069 1562 aa11.71□□□□□ -0.53
PUM1-211ENST00000498419 MYO15BQ96JP2 1530 aa11.69□□□□□ -0.54
PUM1-211ENST00000498419 RB1CC1Q8TDY2 1594 aa11.63□□□□□ -0.55
PUM1-211ENST00000498419 PABPN1Q86U42 306 aaKnown RBP eCLIP11.62□□□□□ -0.55
PUM1-211ENST00000498419 CECR2Q9BXF3 1484 aa11.48□□□□□ -0.57
PUM1-211ENST00000498419 CHIC1Q5VXU3 224 aa11.44□□□□□ -0.58
PUM1-211ENST00000498419 RSF1Q96T23 1441 aaPredicted RBP11.42□□□□□ -0.58
PUM1-211ENST00000498419 UNC13AQ9UPW8 1703 aa11.36□□□□□ -0.59
PUM1-211ENST00000498419 MROH2BQ7Z745 1585 aa11.35□□□□□ -0.59
PUM1-211ENST00000498419 BICRAQ9NZM4 1560 aa11.34□□□□□ -0.59
PUM1-211ENST00000498419 AEBP2Q6ZN18 517 aaPredicted RBP11.32□□□□□ -0.6
PUM1-211ENST00000498419 WIZO95785 1651 aa11.24□□□□□ -0.61
PUM1-211ENST00000498419 BAZ1AQ9NRL2 1556 aaPredicted RBP11.21□□□□□ -0.61
PUM1-211ENST00000498419 SMARCA4P51532 1647 aa11.17□□□□□ -0.62
PUM1-211ENST00000498419 LOC105371045A0A1W2PR82 267 aa11.11□□□□□ -0.63
PUM1-211ENST00000498419 ATAD2BQ9ULI0 1458 aa11.05□□□□□ -0.64
PUM1-211ENST00000498419 CCDC88BA6NC98 1476 aa11.04□□□□□ -0.64
PUM1-211ENST00000498419 TRIM41Q8WV44 630 aa11.03□□□□□ -0.64
PUM1-211ENST00000498419 TOP2AP11388 1531 aaKnown RBP11.02□□□□□ -0.64
PUM1-211ENST00000498419 EIF4G1Q04637 1599 aaKnown RBP11.01□□□□□ -0.65
PUM1-211ENST00000498419 FAM9AQ8IZU1 332 aaPredicted RBP11.01□□□□□ -0.65
PUM1-211ENST00000498419 EHMT2Q96KQ7 1210 aa11□□□□□ -0.65
PUM1-211ENST00000498419 BAZ1BQ9UIG0 1483 aaKnown RBP11□□□□□ -0.65
PUM1-211ENST00000498419 PCGF6Q9BYE7 350 aa10.98□□□□□ -0.65
PUM1-211ENST00000498419 SMARCA2P51531 1590 aa10.96□□□□□ -0.66
PUM1-211ENST00000498419 HRCP23327 699 aa10.93□□□□□ -0.66
PUM1-211ENST00000498419 PEG3Q9GZU2 1588 aa10.93□□□□□ -0.66
PUM1-211ENST00000498419 DNAJC5BQ9UF47 199 aa10.9□□□□□ -0.66
PUM1-211ENST00000498419 NCAPD3P42695 1498 aa10.89□□□□□ -0.67
PUM1-211ENST00000498419 ABCC8Q09428 1581 aa10.88□□□□□ -0.67
PUM1-211ENST00000498419 CC2D2AQ9P2K1 1620 aa10.86□□□□□ -0.67
PUM1-211ENST00000498419 TRIM26Q12899 539 aaPredicted RBP10.79□□□□□ -0.68
PUM1-211ENST00000498419 HMGXB3Q12766 1538 aa10.79□□□□□ -0.68
PUM1-211ENST00000498419 WRNQ14191 1432 aaPredicted RBP eCLIP10.74□□□□□ -0.691e-10■□□□□ 9.9
PUM1-211ENST00000498419 PPARGC1BQ86YN6 1023 aaKnown RBP10.73□□□□□ -0.69
PUM1-211ENST00000498419 SOGA1O94964 1423 aa10.73□□□□□ -0.69
PUM1-211ENST00000498419 CADPSQ9ULU8 1353 aa10.69□□□□□ -0.7
PUM1-211ENST00000498419 RUSC2Q8N2Y8 1516 aa10.69□□□□□ -0.7
PUM1-211ENST00000498419 NESP48681 1621 aa10.69□□□□□ -0.7
PUM1-211ENST00000498419 CFTRP13569 1480 aa10.68□□□□□ -0.7
PUM1-211ENST00000498419 SYNJ1O43426 1573 aa10.66□□□□□ -0.7
PUM1-211ENST00000498419 CSRNP3Q8WYN3 585 aa10.62□□□□□ -0.71
PUM1-211ENST00000498419 RANGAP1P46060 587 aaPredicted RBP10.61□□□□□ -0.71
PUM1-211ENST00000498419 UBTFP17480 764 aaKnown RBP10.6□□□□□ -0.71
PUM1-211ENST00000498419 CUX1P39880 1505 aa10.58□□□□□ -0.72
PUM1-211ENST00000498419 FANCD2Q9BXW9 1451 aa10.58□□□□□ -0.72
PUM1-211ENST00000498419 TOP2BQ02880 1626 aa10.53□□□□□ -0.72
PUM1-211ENST00000498419 EEA1Q15075 1411 aa10.52□□□□□ -0.72
PUM1-211ENST00000498419 CEP162Q5TB80 1403 aa10.52□□□□□ -0.73
PUM1-211ENST00000498419 TNIKQ9UKE5 1360 aa10.51□□□□□ -0.73
PUM1-211ENST00000498419 TTBK1Q5TCY1 1321 aaPredicted RBP10.5□□□□□ -0.73
PUM1-211ENST00000498419 ZEB1P37275 1124 aaPredicted RBP10.49□□□□□ -0.73
PUM1-211ENST00000498419 FGD5Q6ZNL6 1462 aa10.48□□□□□ -0.73
PUM1-211ENST00000498419 RAD54L2Q9Y4B4 1467 aa10.48□□□□□ -0.73
PUM1-211ENST00000498419 PDS5BQ9NTI5 1447 aa10.47□□□□□ -0.73
PUM1-211ENST00000498419 CEP164Q9UPV0 1460 aa10.47□□□□□ -0.73
PUM1-211ENST00000498419 CUX2O14529 1486 aa10.47□□□□□ -0.73
PUM1-211ENST00000498419 GOLGA3Q08378 1498 aa10.46□□□□□ -0.74
PUM1-211ENST00000498419 RAPGEF2Q9Y4G8 1499 aa10.45□□□□□ -0.74
PUM1-211ENST00000498419 BIVM-ERCC5R4GMW8 1640 aa10.45□□□□□ -0.74
PUM1-211ENST00000498419 KIF27Q86VH2 1401 aa10.44□□□□□ -0.74
PUM1-211ENST00000498419 LAMC3Q9Y6N6 1575 aa10.44□□□□□ -0.74
PUM1-211ENST00000498419 URB2Q14146 1524 aaKnown RBP10.44□□□□□ -0.74
PUM1-211ENST00000498419 TOPBP1Q92547 1522 aa10.44□□□□□ -0.74
PUM1-211ENST00000498419 TDRD9Q8NDG6 1382 aaKnown RBP10.43□□□□□ -0.74
PUM1-211ENST00000498419 POLA1P09884 1462 aaPredicted RBP10.42□□□□□ -0.74
PUM1-211ENST00000498419 IGF1RP08069 1367 aa10.41□□□□□ -0.74
PUM1-211ENST00000498419 KIF21BO75037 1637 aa10.4□□□□□ -0.74
PUM1-211ENST00000498419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.39□□□□□ -0.75
PUM1-211ENST00000498419 PRDM2Q13029 1718 aa10.38□□□□□ -0.75
PUM1-211ENST00000498419 DNMBPQ6XZF7 1577 aa10.38□□□□□ -0.75
PUM1-211ENST00000498419 ERCC6Q03468 1493 aa10.38□□□□□ -0.75
PUM1-211ENST00000498419 KIF21AQ7Z4S6 1674 aa10.38□□□□□ -0.75
PUM1-211ENST00000498419 PRXQ9BXM0 1461 aa10.35□□□□□ -0.75
PUM1-211ENST00000498419 CARMIL1Q5VZK9 1371 aa10.35□□□□□ -0.75
PUM1-211ENST00000498419 CCER1Q8TC90 406 aaPredicted RBP10.34□□□□□ -0.75
PUM1-211ENST00000498419 CLIP1P30622 1438 aa10.34□□□□□ -0.75
PUM1-211ENST00000498419 P3H3Q8IVL6 736 aa10.33□□□□□ -0.76
PUM1-211ENST00000498419 AQRO60306 1485 aaKnown RBP eCLIP10.32□□□□□ -0.767e-7■■■■■ 34.6
PUM1-211ENST00000498419 MRC2Q9UBG0 1479 aa10.31□□□□□ -0.76
PUM1-211ENST00000498419 ABCA10Q8WWZ4 1543 aa10.31□□□□□ -0.76
PUM1-211ENST00000498419 VPS8Q8N3P4 1428 aa10.28□□□□□ -0.76
PUM1-211ENST00000498419 GAPVD1Q14C86 1478 aa10.27□□□□□ -0.77
PUM1-211ENST00000498419 ZNF608Q9ULD9 1512 aaPredicted RBP10.27□□□□□ -0.77
PUM1-211ENST00000498419 FBLN2P98095 1184 aa10.25□□□□□ -0.77
PUM1-211ENST00000498419 ATP1B4Q9UN42 357 aaPredicted RBP10.25□□□□□ -0.77
PUM1-211ENST00000498419 ERICH3Q5RHP9 1530 aa10.24□□□□□ -0.77
PUM1-211ENST00000498419 APLP2Q06481 763 aa10.22□□□□□ -0.77
PUM1-211ENST00000498419 ARAP1Q96P48 1450 aa10.21□□□□□ -0.77
PUM1-211ENST00000498419 TARBP1Q13395 1621 aaKnown RBP10.21□□□□□ -0.78
PUM1-211ENST00000498419 WDR62O43379 1518 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms