Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 PPP2R5C-212ENST00000554442 800 ntTSL 1 (best) BASIC9.5□□□□□ -0.891e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-242ENST00000553020 576 ntTSL 59.47□□□□□ -0.891e-7■■■■□ 24.4
SRSF1Q07955 PPP2R5C-203ENST00000350249 3845 ntTSL 1 (best) BASIC9.46□□□□□ -0.91e-7■■■■□ 24.4
SRSF1Q07955 PPP2R5C-230ENST00000557714 536 ntTSL 4 BASIC9.14□□□□□ -0.951e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-202ENST00000418359 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.971e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-201ENST00000229195 3282 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -11e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-224ENST00000550194 747 ntTSL 58.27□□□□□ -1.091e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-207ENST00000547867 571 ntTSL 48.27□□□□□ -1.091e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-234ENST00000551873 677 ntTSL 58.27□□□□□ -1.091e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-212ENST00000548599 643 ntTSL 58.27□□□□□ -1.091e-7■■■■□ 24.4
SRSF1Q07955 PPP2R5C-202ENST00000334743 4328 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.091e-7■■■■□ 24.4
SRSF1Q07955 PPP2R5C-208ENST00000553842 421 ntTSL 38.06□□□□□ -1.121e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-205ENST00000547321 577 ntTSL 27.81□□□□□ -1.161e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-229ENST00000551179 355 ntTSL 27.81□□□□□ -1.161e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-228ENST00000551132 618 ntTSL 37.81□□□□□ -1.161e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-243ENST00000553078 440 ntTSL 37.81□□□□□ -1.161e-7■■■■□ 24.4
SRSF1Q07955 PPP2R5C-220ENST00000556373 285 ntTSL 57.8□□□□□ -1.161e-7■■■■□ 24.4
SRSF1Q07955 PPP2R5C-201ENST00000328724 4045 ntTSL 2 BASIC7.76□□□□□ -1.171e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-225ENST00000550641 964 ntTSL 57.64□□□□□ -1.191e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-232ENST00000551661 571 ntTSL 47.36□□□□□ -1.231e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-208ENST00000548021 724 ntTSL 26.71□□□□□ -1.341e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-237ENST00000552319 783 ntTSL 56.65□□□□□ -1.341e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-217ENST00000549443 457 ntTSL 46.65□□□□□ -1.341e-7■■■■□ 24.4
SRSF1Q07955 PPP2R5C-221ENST00000556493 457 ntTSL 46.28□□□□□ -1.41e-7■■■■□ 24.4
SRSF1Q07955 CNOT2-238ENST00000552422 443 ntTSL 36.03□□□□□ -1.441e-7■■■■□ 24.4
SRSF1Q07955 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC5.75□□□□□ -1.491e-7■■■■□ 24.4
SRSF1Q07955 ACSS2-204ENST00000464399 358 ntTSL 55.69□□□□□ -1.51e-7■■■■□ 24.4
SRSF1Q07955 PPP2R5C-229ENST00000557621 759 ntTSL 55.51□□□□□ -1.531e-7■■■■□ 24.4
SRSF1Q07955 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.79□□□□□ -1.641e-7■■■■□ 24.4
SRSF1Q07955 PPP2R5C-219ENST00000556307 601 ntTSL 34.65□□□□□ -1.671e-7■■■■□ 24.4
SRSF1Q07955 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.99□□□□□ -1.771e-7■■■■□ 24.4
SRSF1Q07955 RTKN-206ENST00000469859 496 ntTSL 315.92■□□□□ 0.145e-6■■■■□ 24.4
SRSF1Q07955 EZH2-207ENST00000483012 1491 ntTSL 222.14■■□□□ 1.139e-15■■■■□ 24.4
SRSF1Q07955 EZH2-210ENST00000498186 1876 ntTSL 219.67■□□□□ 0.749e-15■■■■□ 24.4
SRSF1Q07955 EML4-205ENST00000409040 962 ntTSL 1 (best)16.95■□□□□ 0.36e-8■■■■□ 24.4
SRSF1Q07955 EIF2B5-203ENST00000432982 597 ntTSL 516.41■□□□□ 0.226e-8■■■■□ 24.4
SRSF1Q07955 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.26e-8■■■■□ 24.4
SRSF1Q07955 EIF2B5-214ENST00000492773 553 ntTSL 412.91□□□□□ -0.346e-8■■■■□ 24.4
SRSF1Q07955 EIF2B5-212ENST00000491144 3038 ntTSL 212.61□□□□□ -0.396e-8■■■■□ 24.4
SRSF1Q07955 EIF2B5-204ENST00000465218 1310 ntTSL 511.88□□□□□ -0.516e-8■■■■□ 24.4
SRSF1Q07955 EIF2B5-209ENST00000481054 3460 ntTSL 1 (best)11.41□□□□□ -0.586e-8■■■■□ 24.4
SRSF1Q07955 EIF2B5-210ENST00000484154 449 ntTSL 38.84□□□□□ -0.996e-8■■■■□ 24.4
SRSF1Q07955 MCM4-214ENST00000523853 354 ntTSL 27.6□□□□□ -1.196e-8■■■■□ 24.4
SRSF1Q07955 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.266e-8■■■■□ 24.4
SRSF1Q07955 EIF2B5-207ENST00000479250 466 ntTSL 26.93□□□□□ -1.36e-8■■■■□ 24.4
SRSF1Q07955 MCM4-204ENST00000518382 366 ntTSL 34.34□□□□□ -1.716e-8■■■■□ 24.4
SRSF1Q07955 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.092e-6■■■■□ 24.2
SRSF1Q07955 NISCH-206ENST00000474188 564 ntTSL 210.89□□□□□ -0.673e-8■■■■□ 24.2
SRSF1Q07955 SNF8-208ENST00000510195 445 ntTSL 225.56■■□□□ 1.689e-7■■■■□ 24.1
SRSF1Q07955 SNF8-213ENST00000514929 775 ntTSL 523.08■■□□□ 1.299e-7■■■■□ 24.1
SRSF1Q07955 SNF8-209ENST00000510558 1051 ntTSL 521.81■■□□□ 1.089e-7■■■■□ 24.1
SRSF1Q07955 SNF8-217ENST00000576353 700 ntTSL 521.72■■□□□ 1.079e-7■■■■□ 24.1
SRSF1Q07955 SNF8-216ENST00000573795 583 ntTSL 521.67■■□□□ 1.069e-7■■■■□ 24.1
SRSF1Q07955 COMTD1-203ENST00000469299 871 ntTSL 321.19■□□□□ 0.989e-7■■■■□ 24.1
SRSF1Q07955 COMTD1-202ENST00000460899 1094 ntTSL 221.19■□□□□ 0.989e-7■■■■□ 24.1
SRSF1Q07955 COMTD1-204ENST00000470947 796 ntTSL 221.19■□□□□ 0.989e-7■■■■□ 24.1
SRSF1Q07955 COMTD1-205ENST00000490521 562 ntTSL 220.84■□□□□ 0.939e-7■■■■□ 24.1
SRSF1Q07955 COMTD1-207ENST00000494596 539 ntTSL 218.84■□□□□ 0.619e-7■■■■□ 24.1
SRSF1Q07955 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.449e-7■■■■□ 24.1
SRSF1Q07955 NBEAL2-208ENST00000475689 677 ntTSL 217.69■□□□□ 0.429e-7■■■■□ 24.1
SRSF1Q07955 APBB3-208ENST00000503979 875 ntTSL 217.45■□□□□ 0.389e-7■■■■□ 24.1
SRSF1Q07955 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.389e-7■■■■□ 24.1
SRSF1Q07955 SNF8-205ENST00000507302 742 ntTSL 316.83■□□□□ 0.289e-7■■■■□ 24.1
SRSF1Q07955 APBB3-218ENST00000511463 636 ntTSL 316.57■□□□□ 0.249e-7■■■■□ 24.1
SRSF1Q07955 TRIM11-205ENST00000602308 586 ntTSL 315.83■□□□□ 0.129e-7■■■■□ 24.1
SRSF1Q07955 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.039e-7■■■■□ 24.1
SRSF1Q07955 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.05■□□□□ -09e-7■■■■□ 24.1
SRSF1Q07955 MPV17-221ENST00000621183 896 ntTSL 514.69□□□□□ -0.069e-7■■■■□ 24.1
SRSF1Q07955 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.37□□□□□ -0.119e-7■■■■□ 24.1
SRSF1Q07955 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.83□□□□□ -0.29e-7■■■■□ 24.1
SRSF1Q07955 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.239e-7■■■■□ 24.1
SRSF1Q07955 TRIM11-206ENST00000602582 682 ntTSL 313.47□□□□□ -0.259e-7■■■■□ 24.1
SRSF1Q07955 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.21□□□□□ -0.299e-7■■■■□ 24.1
SRSF1Q07955 MPV17-211ENST00000426513 905 ntTSL 313.12□□□□□ -0.319e-7■■■■□ 24.1
SRSF1Q07955 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.429e-7■■■■□ 24.1
SRSF1Q07955 APBB3-221ENST00000515056 2064 ntTSL 212.33□□□□□ -0.449e-7■■■■□ 24.1
SRSF1Q07955 CDC45-212ENST00000493724 469 ntTSL 212.26□□□□□ -0.459e-7■■■■□ 24.1
SRSF1Q07955 MPV17-209ENST00000405983 859 ntTSL 5 BASIC12.2□□□□□ -0.469e-7■■■■□ 24.1
SRSF1Q07955 MPV17-210ENST00000415514 597 ntTSL 512.2□□□□□ -0.469e-7■■■■□ 24.1
SRSF1Q07955 SNF8-207ENST00000509995 560 ntTSL 312□□□□□ -0.499e-7■■■■□ 24.1
SRSF1Q07955 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.24□□□□□ -0.619e-7■■■■□ 24.1
SRSF1Q07955 APBB3-209ENST00000504872 538 ntTSL 410.92□□□□□ -0.669e-7■■■■□ 24.1
SRSF1Q07955 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC10.81□□□□□ -0.689e-7■■■■□ 24.1
SRSF1Q07955 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.739e-7■■■■□ 24.1
SRSF1Q07955 SNF8-201ENST00000290330 951 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.819e-7■■■■□ 24.1
SRSF1Q07955 PEX1-203ENST00000428214 3681 ntTSL 1 (best) BASIC9.19□□□□□ -0.949e-7■■■■□ 24.1
SRSF1Q07955 SNF8-214ENST00000515174 823 ntTSL 29.02□□□□□ -0.979e-7■■■■□ 24.1
SRSF1Q07955 PEX1-208ENST00000484913 4051 ntTSL 28.95□□□□□ -0.989e-7■■■■□ 24.1
SRSF1Q07955 SNF8-211ENST00000512243 863 ntTSL 28.27□□□□□ -1.099e-7■■■■□ 24.1
SRSF1Q07955 MPV17-202ENST00000357186 2011 ntTSL 2 BASIC8.2□□□□□ -1.19e-7■■■■□ 24.1
SRSF1Q07955 MPV17-220ENST00000620797 624 ntTSL 38.16□□□□□ -1.19e-7■■■■□ 24.1
SRSF1Q07955 MPV17-213ENST00000430991 482 ntTSL 58.01□□□□□ -1.139e-7■■■■□ 24.1
SRSF1Q07955 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC7.4□□□□□ -1.229e-7■■■■□ 24.1
SRSF1Q07955 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.269e-7■■■■□ 24.1
SRSF1Q07955 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.39e-7■■■■□ 24.1
SRSF1Q07955 PEX1-210ENST00000496420 5333 ntTSL 26.88□□□□□ -1.319e-7■■■■□ 24.1
SRSF1Q07955 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.47□□□□□ -1.379e-7■■■■□ 24.1
SRSF1Q07955 CCNT1-202ENST00000417344 2017 ntTSL 25.15□□□□□ -1.589e-7■■■■□ 24.1
SRSF1Q07955 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.49□□□□□ -1.699e-7■■■■□ 24.1
SRSF1Q07955 PEX1-202ENST00000422866 734 ntTSL 54.13□□□□□ -1.759e-7■■■■□ 24.1
Retrieved 100 of 14,836 protein–RNA pairs in 516.2 ms