RNA–Protein interactions for RNA: ENST00000550194.5

CNOT2-224, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-224ENST00000550194 DNAJC5BQ9UF47 199 aa18.16■□□□□ 0.5
CNOT2-224ENST00000550194 ABCC9O60706 1549 aa17.98■□□□□ 0.47
CNOT2-224ENST00000550194 NISCHQ9Y2I1 1504 aa17.82■□□□□ 0.44
CNOT2-224ENST00000550194 DNAJC5Q9H3Z4 198 aa17.62■□□□□ 0.41
CNOT2-224ENST00000550194 CCDC180Q9P1Z9 1646 aa16.63■□□□□ 0.25
CNOT2-224ENST00000550194 PABPN1Q86U42 306 aaKnown RBP eCLIP16.49■□□□□ 0.23
CNOT2-224ENST00000550194 RB1CC1Q8TDY2 1594 aa16.46■□□□□ 0.23
CNOT2-224ENST00000550194 CECR2Q9BXF3 1484 aa16.32■□□□□ 0.2
CNOT2-224ENST00000550194 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
CNOT2-224ENST00000550194 TRIM41Q8WV44 630 aa16.25■□□□□ 0.19
CNOT2-224ENST00000550194 CC2D2AQ9P2K1 1620 aa16.19■□□□□ 0.18
CNOT2-224ENST00000550194 BICRAQ9NZM4 1560 aa16.14■□□□□ 0.17
CNOT2-224ENST00000550194 CUX2O14529 1486 aa16.03■□□□□ 0.16
CNOT2-224ENST00000550194 NACADO15069 1562 aa16■□□□□ 0.15
CNOT2-224ENST00000550194 EIF4G1Q04637 1599 aaKnown RBP15.8■□□□□ 0.12
CNOT2-224ENST00000550194 SHROOM4Q9ULL8 1493 aa15.65■□□□□ 0.1
CNOT2-224ENST00000550194 AEBP2Q6ZN18 517 aaPredicted RBP15.61■□□□□ 0.09
CNOT2-224ENST00000550194 ERCC6Q03468 1493 aa15.56■□□□□ 0.08
CNOT2-224ENST00000550194 DCAF8L2P0C7V8 631 aa15.54■□□□□ 0.08
CNOT2-224ENST00000550194 ILDR1Q86SU0 546 aaPredicted RBP15.36■□□□□ 0.05
CNOT2-224ENST00000550194 MYO15BQ96JP2 1530 aa15.3■□□□□ 0.04
CNOT2-224ENST00000550194 THOC2Q8NI27 1593 aaKnown RBP15.23■□□□□ 0.03
CNOT2-224ENST00000550194 RIMBP3CA6NJZ7 1639 aa15.1■□□□□ 0.01
CNOT2-224ENST00000550194 RIMBP3BA6NNM3 1639 aa15.1■□□□□ 0.01
CNOT2-224ENST00000550194 SCRIBQ14160 1630 aa15.1■□□□□ 0.01
CNOT2-224ENST00000550194 RIMBP3Q9UFD9 1639 aa15.1■□□□□ 0.01
CNOT2-224ENST00000550194 BAZ1AQ9NRL2 1556 aaPredicted RBP15.08■□□□□ 0
CNOT2-224ENST00000550194 NESP48681 1621 aa15.08■□□□□ 0
CNOT2-224ENST00000550194 TRHP20396 242 aaPredicted RBP15.04■□□□□ -0
CNOT2-224ENST00000550194 OSCARQ8IYS5 282 aa15.01□□□□□ -0.01
CNOT2-224ENST00000550194 SMARCA2P51531 1590 aa14.95□□□□□ -0.02
CNOT2-224ENST00000550194 KIF21AQ7Z4S6 1674 aa14.87□□□□□ -0.03
CNOT2-224ENST00000550194 ARHGEF11O15085 1522 aa14.87□□□□□ -0.03
CNOT2-224ENST00000550194 NCAPD3P42695 1498 aa14.8□□□□□ -0.04
CNOT2-224ENST00000550194 CYB5RLQ6IPT4 315 aa14.79□□□□□ -0.04
CNOT2-224ENST00000550194 LAMC3Q9Y6N6 1575 aa14.69□□□□□ -0.06
CNOT2-224ENST00000550194 WDR62O43379 1518 aa14.66□□□□□ -0.06
CNOT2-224ENST00000550194 ARAP1Q96P48 1450 aa14.65□□□□□ -0.06
CNOT2-224ENST00000550194 MRC2Q9UBG0 1479 aa14.61□□□□□ -0.07
CNOT2-224ENST00000550194 DCAF1Q9Y4B6 1507 aa14.61□□□□□ -0.07
CNOT2-224ENST00000550194 PDS5BQ9NTI5 1447 aa14.59□□□□□ -0.07
CNOT2-224ENST00000550194 HMGXB3Q12766 1538 aa14.57□□□□□ -0.08
CNOT2-224ENST00000550194 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
CNOT2-224ENST00000550194 ZCCHC6Q5VYS8 1495 aaKnown RBP14.48□□□□□ -0.09
CNOT2-224ENST00000550194 LMTK3Q96Q04 1460 aa14.45□□□□□ -0.1
CNOT2-224ENST00000550194 SOCS7O14512 581 aa14.4□□□□□ -0.1
CNOT2-224ENST00000550194 CHIC1Q5VXU3 224 aa14.4□□□□□ -0.1
CNOT2-224ENST00000550194 KDM4FA0A1W2PPD8 638 aa14.38□□□□□ -0.11
CNOT2-224ENST00000550194 FBXO41Q8TF61 875 aa14.35□□□□□ -0.11
CNOT2-224ENST00000550194 ERCC6L2Q5T890 1561 aa14.33□□□□□ -0.12
CNOT2-224ENST00000550194 BAZ1BQ9UIG0 1483 aaKnown RBP14.32□□□□□ -0.12
CNOT2-224ENST00000550194 ILDR2Q71H61 639 aa14.31□□□□□ -0.12
CNOT2-224ENST00000550194 RSF1Q96T23 1441 aaPredicted RBP14.3□□□□□ -0.12
CNOT2-224ENST00000550194 SMARCA4P51532 1647 aa14.27□□□□□ -0.12
CNOT2-224ENST00000550194 CHD1O14646 1710 aa14.26□□□□□ -0.13
CNOT2-224ENST00000550194 CEP164Q9UPV0 1460 aa14.25□□□□□ -0.13
CNOT2-224ENST00000550194 CADPSQ9ULU8 1353 aa14.25□□□□□ -0.13
CNOT2-224ENST00000550194 HECW2Q9P2P5 1572 aa14.22□□□□□ -0.13
CNOT2-224ENST00000550194 ZNF608Q9ULD9 1512 aaPredicted RBP14.2□□□□□ -0.14
CNOT2-224ENST00000550194 URB2Q14146 1524 aaKnown RBP14.15□□□□□ -0.14
CNOT2-224ENST00000550194 FANCD2Q9BXW9 1451 aa14.12□□□□□ -0.15
CNOT2-224ENST00000550194 KIF13AQ9H1H9 1805 aa14.11□□□□□ -0.15
CNOT2-224ENST00000550194 PEG3Q9GZU2 1588 aa14.09□□□□□ -0.15
CNOT2-224ENST00000550194 EIF4G3O43432 1585 aaKnown RBP14.06□□□□□ -0.16
CNOT2-224ENST00000550194 DISP3Q9P2K9 1392 aa14.05□□□□□ -0.16
CNOT2-224ENST00000550194 CLASP1Q7Z460 1538 aa14.02□□□□□ -0.16
CNOT2-224ENST00000550194 IFT140Q96RY7 1462 aa14.01□□□□□ -0.17
CNOT2-224ENST00000550194 SYNJ2O15056 1496 aa13.99□□□□□ -0.17
CNOT2-224ENST00000550194 FBLN2P98095 1184 aa13.97□□□□□ -0.17
CNOT2-224ENST00000550194 GAPVD1Q14C86 1478 aa13.94□□□□□ -0.18
CNOT2-224ENST00000550194 ADGRL1O94910 1474 aa13.93□□□□□ -0.18
CNOT2-224ENST00000550194 KDM6BO15054 1643 aa13.9□□□□□ -0.19
CNOT2-224ENST00000550194 AQRO60306 1485 aaKnown RBP eCLIP13.87□□□□□ -0.19
CNOT2-224ENST00000550194 SPATA31D1Q6ZQQ2 1576 aa13.83□□□□□ -0.19
CNOT2-224ENST00000550194 CFTRP13569 1480 aa13.82□□□□□ -0.2
CNOT2-224ENST00000550194 SYNJ1O43426 1573 aa13.82□□□□□ -0.2
CNOT2-224ENST00000550194 TARBP1Q13395 1621 aaKnown RBP13.75□□□□□ -0.21
CNOT2-224ENST00000550194 MROH2BQ7Z745 1585 aa13.75□□□□□ -0.21
CNOT2-224ENST00000550194 TOPBP1Q92547 1522 aa13.71□□□□□ -0.21
CNOT2-224ENST00000550194 FAM69CQ0P6D2 419 aa13.71□□□□□ -0.21
CNOT2-224ENST00000550194 ABCC10Q5T3U5 1492 aa13.71□□□□□ -0.21
CNOT2-224ENST00000550194 TSPOAP1O95153 1857 aa13.71□□□□□ -0.21
CNOT2-224ENST00000550194 DIP2BQ9P265 1576 aa13.68□□□□□ -0.22
CNOT2-224ENST00000550194 SNAPC4Q5SXM2 1469 aa13.67□□□□□ -0.22
CNOT2-224ENST00000550194 PRDM2Q13029 1718 aa13.66□□□□□ -0.22
CNOT2-224ENST00000550194 CHMP7Q8WUX9 453 aaPredicted RBP13.62□□□□□ -0.23
CNOT2-224ENST00000550194 MAGI1Q96QZ7 1491 aaPredicted RBP13.55□□□□□ -0.24
CNOT2-224ENST00000550194 MAPKBP1O60336 1514 aa13.54□□□□□ -0.24
CNOT2-224ENST00000550194 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
CNOT2-224ENST00000550194 WIZO95785 1651 aa13.53□□□□□ -0.24
CNOT2-224ENST00000550194 CERKQ8TCT0 537 aa13.53□□□□□ -0.24
CNOT2-224ENST00000550194 TDRD9Q8NDG6 1382 aaKnown RBP13.53□□□□□ -0.24
CNOT2-224ENST00000550194 CEP170Q5SW79 1584 aa13.52□□□□□ -0.25
CNOT2-224ENST00000550194 ABCC8Q09428 1581 aa13.5□□□□□ -0.25
CNOT2-224ENST00000550194 TOP2BQ02880 1626 aa13.5□□□□□ -0.25
CNOT2-224ENST00000550194 POLA1P09884 1462 aaPredicted RBP13.48□□□□□ -0.25
CNOT2-224ENST00000550194 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
CNOT2-224ENST00000550194 PPRC1Q5VV67 1664 aaKnown RBP13.46□□□□□ -0.26
CNOT2-224ENST00000550194 COL17A1Q9UMD9 1497 aaPredicted RBP13.43□□□□□ -0.26
CNOT2-224ENST00000550194 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms