RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 NISCHQ9Y2I1 1504 aa37.56■■■■□ 3.6
TRIM11-205ENST00000602308 ABCC9O60706 1549 aa35.38■■■■□ 3.25
TRIM11-205ENST00000602308 DNAJC5BQ9UF47 199 aa34.36■■■■□ 3.09
TRIM11-205ENST00000602308 CCDC180Q9P1Z9 1646 aa34.1■■■■□ 3.05
TRIM11-205ENST00000602308 RB1CC1Q8TDY2 1594 aa33.07■■■□□ 2.88
TRIM11-205ENST00000602308 PABPN1Q86U42 306 aaKnown RBP eCLIP32.82■■■□□ 2.84
TRIM11-205ENST00000602308 NACADO15069 1562 aa32.57■■■□□ 2.8
TRIM11-205ENST00000602308 DNAJC5Q9H3Z4 198 aa32.33■■■□□ 2.77
TRIM11-205ENST00000602308 UNC13AQ9UPW8 1703 aa32.31■■■□□ 2.76
TRIM11-205ENST00000602308 DCAF8L2P0C7V8 631 aa32.27■■■□□ 2.76
TRIM11-205ENST00000602308 BICRAQ9NZM4 1560 aa32.23■■■□□ 2.75
TRIM11-205ENST00000602308 CECR2Q9BXF3 1484 aa31.98■■■□□ 2.71
TRIM11-205ENST00000602308 CC2D2AQ9P2K1 1620 aa31.86■■■□□ 2.69
TRIM11-205ENST00000602308 MYO15BQ96JP2 1530 aa31.74■■■□□ 2.67
TRIM11-205ENST00000602308 SHROOM4Q9ULL8 1493 aa31.57■■■□□ 2.64
TRIM11-205ENST00000602308 EIF4G1Q04637 1599 aaKnown RBP31.51■■■□□ 2.63
TRIM11-205ENST00000602308 SCRIBQ14160 1630 aa31.07■■■□□ 2.56
TRIM11-205ENST00000602308 CUX2O14529 1486 aa30.91■■■□□ 2.54
TRIM11-205ENST00000602308 DCAF1Q9Y4B6 1507 aa30.9■■■□□ 2.54
TRIM11-205ENST00000602308 ZCCHC6Q5VYS8 1495 aaKnown RBP30.87■■■□□ 2.53
TRIM11-205ENST00000602308 ERCC6Q03468 1493 aa30.57■■■□□ 2.48
TRIM11-205ENST00000602308 TRIM41Q8WV44 630 aa30.43■■■□□ 2.46
TRIM11-205ENST00000602308 NCAPD3P42695 1498 aa30.15■■■□□ 2.42
TRIM11-205ENST00000602308 NESP48681 1621 aa30.08■■■□□ 2.41
TRIM11-205ENST00000602308 THOC2Q8NI27 1593 aaKnown RBP29.94■■■□□ 2.38
TRIM11-205ENST00000602308 ATAD2BQ9ULI0 1458 aa29.9■■■□□ 2.38
TRIM11-205ENST00000602308 HMGXB3Q12766 1538 aa29.76■■■□□ 2.35
TRIM11-205ENST00000602308 SMARCA2P51531 1590 aa29.69■■■□□ 2.34
TRIM11-205ENST00000602308 LAMC3Q9Y6N6 1575 aa29.58■■■□□ 2.33
TRIM11-205ENST00000602308 KIF21AQ7Z4S6 1674 aa29.56■■■□□ 2.32
TRIM11-205ENST00000602308 SMARCA4P51532 1647 aa29.52■■■□□ 2.32
TRIM11-205ENST00000602308 BAZ1BQ9UIG0 1483 aaKnown RBP29.49■■■□□ 2.31
TRIM11-205ENST00000602308 PDS5BQ9NTI5 1447 aa29.49■■■□□ 2.31
TRIM11-205ENST00000602308 OSCARQ8IYS5 282 aa29.37■■■□□ 2.29
TRIM11-205ENST00000602308 BAZ1AQ9NRL2 1556 aaPredicted RBP29.37■■■□□ 2.29
TRIM11-205ENST00000602308 MRC2Q9UBG0 1479 aa29.3■■■□□ 2.28
TRIM11-205ENST00000602308 WDR62O43379 1518 aa29.27■■■□□ 2.28
TRIM11-205ENST00000602308 PEG3Q9GZU2 1588 aa29.24■■■□□ 2.27
TRIM11-205ENST00000602308 CADPSQ9ULU8 1353 aa29.18■■■□□ 2.26
TRIM11-205ENST00000602308 RIMBP3CA6NJZ7 1639 aa29.07■■■□□ 2.24
TRIM11-205ENST00000602308 RIMBP3BA6NNM3 1639 aa29.07■■■□□ 2.24
TRIM11-205ENST00000602308 RIMBP3Q9UFD9 1639 aa29.07■■■□□ 2.24
TRIM11-205ENST00000602308 MROH2BQ7Z745 1585 aa28.96■■■□□ 2.23
TRIM11-205ENST00000602308 CEP164Q9UPV0 1460 aa28.94■■■□□ 2.22
TRIM11-205ENST00000602308 ARHGEF11O15085 1522 aa28.88■■■□□ 2.21
TRIM11-205ENST00000602308 FANCD2Q9BXW9 1451 aa28.84■■■□□ 2.21
TRIM11-205ENST00000602308 TRHP20396 242 aaPredicted RBP28.83■■■□□ 2.21
TRIM11-205ENST00000602308 AEBP2Q6ZN18 517 aaPredicted RBP28.82■■■□□ 2.2
TRIM11-205ENST00000602308 CYB5RLQ6IPT4 315 aa28.8■■■□□ 2.2
TRIM11-205ENST00000602308 URB2Q14146 1524 aaKnown RBP28.69■■■□□ 2.18
TRIM11-205ENST00000602308 CFTRP13569 1480 aa28.59■■■□□ 2.17
TRIM11-205ENST00000602308 ZNF608Q9ULD9 1512 aaPredicted RBP28.55■■■□□ 2.16
TRIM11-205ENST00000602308 ARAP1Q96P48 1450 aa28.53■■■□□ 2.16
TRIM11-205ENST00000602308 WIZO95785 1651 aa28.51■■■□□ 2.16
TRIM11-205ENST00000602308 IFT140Q96RY7 1462 aa28.41■■■□□ 2.14
TRIM11-205ENST00000602308 RSF1Q96T23 1441 aaPredicted RBP28.29■■■□□ 2.12
TRIM11-205ENST00000602308 EIF4G3O43432 1585 aaKnown RBP28.25■■■□□ 2.11
TRIM11-205ENST00000602308 CHD1O14646 1710 aa28.23■■■□□ 2.11
TRIM11-205ENST00000602308 FBLN2P98095 1184 aa28.19■■■□□ 2.1
TRIM11-205ENST00000602308 AQRO60306 1485 aaKnown RBP eCLIP28.16■■■□□ 2.11e-6■■■■■ 34.8
TRIM11-205ENST00000602308 TOPBP1Q92547 1522 aa28.16■■■□□ 2.1
TRIM11-205ENST00000602308 TOP2AP11388 1531 aaKnown RBP28.05■■■□□ 2.08
TRIM11-205ENST00000602308 PRDM2Q13029 1718 aa28.05■■■□□ 2.08
TRIM11-205ENST00000602308 TARBP1Q13395 1621 aaKnown RBP27.98■■■□□ 2.07
TRIM11-205ENST00000602308 ABCC8Q09428 1581 aa27.95■■■□□ 2.07
TRIM11-205ENST00000602308 CLASP1Q7Z460 1538 aa27.93■■■□□ 2.06
TRIM11-205ENST00000602308 DNMBPQ6XZF7 1577 aa27.9■■■□□ 2.06
TRIM11-205ENST00000602308 ILDR1Q86SU0 546 aaPredicted RBP27.83■■■□□ 2.05
TRIM11-205ENST00000602308 CCDC88BA6NC98 1476 aa27.81■■■□□ 2.04
TRIM11-205ENST00000602308 POLA1P09884 1462 aaPredicted RBP27.81■■■□□ 2.04
TRIM11-205ENST00000602308 TDRD9Q8NDG6 1382 aaKnown RBP27.8■■■□□ 2.04
TRIM11-205ENST00000602308 SNAPC4Q5SXM2 1469 aa27.78■■■□□ 2.04
TRIM11-205ENST00000602308 CHMP7Q8WUX9 453 aaPredicted RBP27.78■■■□□ 2.04
TRIM11-205ENST00000602308 SYNJ1O43426 1573 aa27.77■■■□□ 2.04
TRIM11-205ENST00000602308 RAD54L2Q9Y4B4 1467 aa27.76■■■□□ 2.04
TRIM11-205ENST00000602308 GAPVD1Q14C86 1478 aa27.76■■■□□ 2.03
TRIM11-205ENST00000602308 SOGA1O94964 1423 aa27.67■■■□□ 2.02
TRIM11-205ENST00000602308 MAGI1Q96QZ7 1491 aaPredicted RBP27.63■■■□□ 2.01
TRIM11-205ENST00000602308 SYNJ2O15056 1496 aa27.57■■■□□ 2
TRIM11-205ENST00000602308 WDR97A6NE52 1622 aa27.52■■■□□ 2
TRIM11-205ENST00000602308 GRIN2BQ13224 1484 aa27.52■■■□□ 2
TRIM11-205ENST00000602308 ERCC6L2Q5T890 1561 aa27.48■■□□□ 1.99
TRIM11-205ENST00000602308 KDM4FA0A1W2PPD8 638 aa27.47■■□□□ 1.99
TRIM11-205ENST00000602308 FGD5Q6ZNL6 1462 aa27.45■■□□□ 1.99
TRIM11-205ENST00000602308 KIF13AQ9H1H9 1805 aa27.4■■□□□ 1.98
TRIM11-205ENST00000602308 PBRM1Q86U86 1689 aa27.27■■□□□ 1.96
TRIM11-205ENST00000602308 CEP170Q5SW79 1584 aa27.26■■□□□ 1.96
TRIM11-205ENST00000602308 CUX1P39880 1505 aa27.26■■□□□ 1.95
TRIM11-205ENST00000602308 FAM69CQ0P6D2 419 aa27.23■■□□□ 1.95
TRIM11-205ENST00000602308 GRIN2AQ12879 1464 aa27.18■■□□□ 1.94
TRIM11-205ENST00000602308 ABCC10Q5T3U5 1492 aa27.16■■□□□ 1.94
TRIM11-205ENST00000602308 NUP160Q12769 1436 aa27.16■■□□□ 1.94
TRIM11-205ENST00000602308 SHROOM2Q13796 1616 aa27.12■■□□□ 1.93
TRIM11-205ENST00000602308 ABCA5Q8WWZ7 1642 aa27.1■■□□□ 1.93
TRIM11-205ENST00000602308 KDM6BO15054 1643 aa27.08■■□□□ 1.93
TRIM11-205ENST00000602308 ABCA10Q8WWZ4 1543 aa27.06■■□□□ 1.92
TRIM11-205ENST00000602308 DIP2BQ9P265 1576 aa27.02■■□□□ 1.92
TRIM11-205ENST00000602308 PRG4Q92954 1404 aaPredicted RBP26.99■■□□□ 1.91
TRIM11-205ENST00000602308 ADAMTS12P58397 1594 aa26.98■■□□□ 1.91
TRIM11-205ENST00000602308 MAPKBP1O60336 1514 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms