RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-238ENST00000552422 AEBP2Q6ZN18 517 aaPredicted RBP25.8■■□□□ 1.72
CNOT2-238ENST00000552422 CHIC1Q5VXU3 224 aa24.87■■□□□ 1.57
CNOT2-238ENST00000552422 SENP3Q9H4L4 574 aaPredicted RBP21.99■■□□□ 1.11
CNOT2-238ENST00000552422 PHF23Q9BUL5 403 aaPredicted RBP21.81■■□□□ 1.08
CNOT2-238ENST00000552422 FOXD1Q16676 465 aa20.43■□□□□ 0.86
CNOT2-238ENST00000552422 PLPPR3Q6T4P5 718 aa20.06■□□□□ 0.8
CNOT2-238ENST00000552422 PPP6R1Q9UPN7 881 aa19.37■□□□□ 0.69
CNOT2-238ENST00000552422 ADRA2BP18089 450 aa19.36■□□□□ 0.69
CNOT2-238ENST00000552422 PIAS4Q8N2W9 510 aaPredicted RBP19.22■□□□□ 0.67
CNOT2-238ENST00000552422 MSH5O43196 834 aa19.01■□□□□ 0.63
CNOT2-238ENST00000552422 POTEDQ86YR6 584 aa17.91■□□□□ 0.46
CNOT2-238ENST00000552422 SCAF1Q9H7N4 1312 aaKnown RBP17.73■□□□□ 0.43
CNOT2-238ENST00000552422 MAPK8IP2Q13387 824 aaPredicted RBP17.66■□□□□ 0.42
CNOT2-238ENST00000552422 PPP4R3CPQ6ZMV5 832 aa17.63■□□□□ 0.41
CNOT2-238ENST00000552422 DMRT2Q9Y5R5 561 aa17.48■□□□□ 0.39
CNOT2-238ENST00000552422 CNKSR2Q8WXI2 1034 aa17.21■□□□□ 0.35
CNOT2-238ENST00000552422 NCBP3Q53F19 620 aaKnown RBP17.09■□□□□ 0.33
CNOT2-238ENST00000552422 HOXD11P31277 338 aaPredicted RBP16.97■□□□□ 0.31
CNOT2-238ENST00000552422 RNF216Q9NWF9 866 aaPredicted RBP16.96■□□□□ 0.31
CNOT2-238ENST00000552422 DCAF8L1A6NGE4 600 aa16.82■□□□□ 0.28
CNOT2-238ENST00000552422 KCNA4P22459 653 aa16.82■□□□□ 0.28
CNOT2-238ENST00000552422 NPM3O75607 178 aaKnown RBP16.8■□□□□ 0.28
CNOT2-238ENST00000552422 DNAJC5BQ9UF47 199 aa16.3■□□□□ 0.2
CNOT2-238ENST00000552422 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.23■□□□□ 0.191e-7■□□□□ 8.2
CNOT2-238ENST00000552422 RNF39Q9H2S5 420 aa16.23■□□□□ 0.19
CNOT2-238ENST00000552422 NISCHQ9Y2I1 1504 aa16.15■□□□□ 0.18
CNOT2-238ENST00000552422 CACNB1Q02641 598 aaPredicted RBP16.11■□□□□ 0.17
CNOT2-238ENST00000552422 C1QBPQ07021 282 aaKnown RBP16.03■□□□□ 0.16
CNOT2-238ENST00000552422 SLC4A1APQ9BWU0 796 aaKnown RBP15.97■□□□□ 0.15
CNOT2-238ENST00000552422 SLC4A2P04920 1241 aa15.94■□□□□ 0.14
CNOT2-238ENST00000552422 U3KPZ7 1027 aaPredicted RBP15.88■□□□□ 0.13
CNOT2-238ENST00000552422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.6■□□□□ 0.09
CNOT2-238ENST00000552422 HNRNPUL2Q1KMD3 747 aaKnown RBP15.6■□□□□ 0.09
CNOT2-238ENST00000552422 FOXD4L1Q9NU39 408 aa15.59■□□□□ 0.09
CNOT2-238ENST00000552422 SPINK5Q9NQ38 1064 aaPredicted RBP15.56■□□□□ 0.08
CNOT2-238ENST00000552422 CAPN15O75808 1086 aa15.55■□□□□ 0.08
CNOT2-238ENST00000552422 MYCNP04198 464 aaPredicted RBP15.55■□□□□ 0.08
CNOT2-238ENST00000552422 APLP2Q06481 763 aa15.53■□□□□ 0.08
CNOT2-238ENST00000552422 SAMD1Q6SPF0 538 aaPredicted RBP15.52■□□□□ 0.08
CNOT2-238ENST00000552422 ZBTB22O15209 634 aa15.44■□□□□ 0.06
CNOT2-238ENST00000552422 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
CNOT2-238ENST00000552422 ZNF219Q9P2Y4 722 aaPredicted RBP15.36■□□□□ 0.05
CNOT2-238ENST00000552422 DSG3P32926 999 aa15.33■□□□□ 0.04
CNOT2-238ENST00000552422 ABCB7O75027 752 aa15.22■□□□□ 0.03
CNOT2-238ENST00000552422 ATF5Q9Y2D1 282 aaPredicted RBP15.14■□□□□ 0.01
CNOT2-238ENST00000552422 EHMT2Q96KQ7 1210 aa15.13■□□□□ 0.01
CNOT2-238ENST00000552422 CSRNP3Q8WYN3 585 aa15.07■□□□□ 0
CNOT2-238ENST00000552422 ATXN8OSP0DMR3 200 aa15.06■□□□□ 0
CNOT2-238ENST00000552422 POLA2Q14181 598 aa15.04■□□□□ -0
CNOT2-238ENST00000552422 ZBTB12Q9Y330 459 aaPredicted RBP14.78□□□□□ -0.04
CNOT2-238ENST00000552422 RBM42Q9BTD8 480 aaKnown RBP14.65□□□□□ -0.06
CNOT2-238ENST00000552422 FBLN2P98095 1184 aa14.59□□□□□ -0.07
CNOT2-238ENST00000552422 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
CNOT2-238ENST00000552422 MKRN4PQ13434 485 aaPredicted RBP14.45□□□□□ -0.1
CNOT2-238ENST00000552422 CCDC180Q9P1Z9 1646 aa14.44□□□□□ -0.1
CNOT2-238ENST00000552422 AKT1S1Q96B36 256 aa14.37□□□□□ -0.11
CNOT2-238ENST00000552422 SPDYE2BA6NHP3 402 aa14.33□□□□□ -0.12
CNOT2-238ENST00000552422 SPDYE6P0CI01 402 aa14.33□□□□□ -0.12
CNOT2-238ENST00000552422 SPDYE2Q495Y8 402 aa14.33□□□□□ -0.12
CNOT2-238ENST00000552422 REM2Q8IYK8 340 aaPredicted RBP14.23□□□□□ -0.13
CNOT2-238ENST00000552422 ZNF692Q9BU19 519 aaPredicted RBP14.23□□□□□ -0.13
CNOT2-238ENST00000552422 CHRDL2Q6WN34 429 aa14.17□□□□□ -0.14
CNOT2-238ENST00000552422 SSUH2Q9Y2M2 353 aa14.16□□□□□ -0.14
CNOT2-238ENST00000552422 POTEHQ6S545 545 aa14.13□□□□□ -0.15
CNOT2-238ENST00000552422 PITPNM1O00562 1244 aa14.08□□□□□ -0.16
CNOT2-238ENST00000552422 PABPN1Q86U42 306 aaKnown RBP eCLIP14.04□□□□□ -0.16
CNOT2-238ENST00000552422 SPDYE4A6NLX3 237 aa14.01□□□□□ -0.17
CNOT2-238ENST00000552422 SPDYE1Q8NFV5 336 aaPredicted RBP14.01□□□□□ -0.17
CNOT2-238ENST00000552422 CLEC11AQ9Y240 323 aa13.99□□□□□ -0.17
CNOT2-238ENST00000552422 ABCC9O60706 1549 aa13.93□□□□□ -0.18
CNOT2-238ENST00000552422 PIP4P2Q8N4L2 257 aa13.9□□□□□ -0.18
CNOT2-238ENST00000552422 FXR2P51116 673 aaKnown RBP eCLIP13.87□□□□□ -0.19
CNOT2-238ENST00000552422 PRR29P0C7W0 189 aa13.8□□□□□ -0.2
CNOT2-238ENST00000552422 PRKAR2AP13861 404 aaKnown RBP13.73□□□□□ -0.21
CNOT2-238ENST00000552422 STAG3Q9UJ98 1225 aa13.73□□□□□ -0.21
CNOT2-238ENST00000552422 FKBP8Q14318 412 aa13.69□□□□□ -0.22
CNOT2-238ENST00000552422 PROM2Q8N271 834 aa13.66□□□□□ -0.22
CNOT2-238ENST00000552422 CHADLQ6NUI6 762 aa13.65□□□□□ -0.22
CNOT2-238ENST00000552422 HAX1O00165 279 aa13.58□□□□□ -0.24
CNOT2-238ENST00000552422 CREBZFQ9NS37 354 aa13.5□□□□□ -0.25
CNOT2-238ENST00000552422 RB1CC1Q8TDY2 1594 aa13.49□□□□□ -0.25
CNOT2-238ENST00000552422 ZCCHC6Q5VYS8 1495 aaKnown RBP13.49□□□□□ -0.25
CNOT2-238ENST00000552422 NACADO15069 1562 aa13.49□□□□□ -0.25
CNOT2-238ENST00000552422 FARP1Q9Y4F1 1045 aaPredicted RBP13.48□□□□□ -0.25
CNOT2-238ENST00000552422 MYO15BQ96JP2 1530 aa13.44□□□□□ -0.26
CNOT2-238ENST00000552422 C19orf67A6NJJ6 358 aa13.41□□□□□ -0.26
CNOT2-238ENST00000552422 SP7Q8TDD2 431 aaPredicted RBP13.41□□□□□ -0.26
CNOT2-238ENST00000552422 DCAF1Q9Y4B6 1507 aa13.4□□□□□ -0.26
CNOT2-238ENST00000552422 EVX2Q03828 476 aa13.39□□□□□ -0.27
CNOT2-238ENST00000552422 MIER1Q8N108 512 aa13.34□□□□□ -0.27
CNOT2-238ENST00000552422 PLEKHG5O94827 1062 aa13.33□□□□□ -0.28
CNOT2-238ENST00000552422 CD44P16070 742 aaKnown RBP13.33□□□□□ -0.28
CNOT2-238ENST00000552422 UNC13AQ9UPW8 1703 aa13.33□□□□□ -0.28
CNOT2-238ENST00000552422 DCAF8L2P0C7V8 631 aa13.31□□□□□ -0.28
CNOT2-238ENST00000552422 NPM1P06748 294 aaKnown RBP eCLIP13.3□□□□□ -0.28
CNOT2-238ENST00000552422 FBXO3Q9UK99 471 aa13.3□□□□□ -0.28
CNOT2-238ENST00000552422 MNX1P50219 401 aaPredicted RBP13.29□□□□□ -0.28
CNOT2-238ENST00000552422 PLCD3Q8N3E9 789 aa13.29□□□□□ -0.28
CNOT2-238ENST00000552422 ZRANB1Q9UGI0 708 aa13.21□□□□□ -0.29
CNOT2-238ENST00000552422 PAK3O75914 559 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 193.5 ms