RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	AEBP2	Q6ZN18	517 aa	Predicted RBP	25.8	■■□□□ 1.72
CNOT2-238	ENST00000552422	CHIC1	Q5VXU3	224 aa		24.87	■■□□□ 1.57
CNOT2-238	ENST00000552422	SENP3	Q9H4L4	574 aa	Predicted RBP	21.99	■■□□□ 1.11
CNOT2-238	ENST00000552422	PHF23	Q9BUL5	403 aa	Predicted RBP	21.81	■■□□□ 1.08
CNOT2-238	ENST00000552422	FOXD1	Q16676	465 aa		20.43	■□□□□ 0.86
CNOT2-238	ENST00000552422	PLPPR3	Q6T4P5	718 aa		20.06	■□□□□ 0.8
CNOT2-238	ENST00000552422	PPP6R1	Q9UPN7	881 aa		19.37	■□□□□ 0.69
CNOT2-238	ENST00000552422	ADRA2B	P18089	450 aa		19.36	■□□□□ 0.69
CNOT2-238	ENST00000552422	PIAS4	Q8N2W9	510 aa	Predicted RBP	19.22	■□□□□ 0.67
CNOT2-238	ENST00000552422	MSH5	O43196	834 aa		19.01	■□□□□ 0.63
CNOT2-238	ENST00000552422	POTED	Q86YR6	584 aa		17.91	■□□□□ 0.46
CNOT2-238	ENST00000552422	SCAF1	Q9H7N4	1312 aa	Known RBP	17.73	■□□□□ 0.43
CNOT2-238	ENST00000552422	MAPK8IP2	Q13387	824 aa	Predicted RBP	17.66	■□□□□ 0.42
CNOT2-238	ENST00000552422	PPP4R3CP	Q6ZMV5	832 aa		17.63	■□□□□ 0.41
CNOT2-238	ENST00000552422	DMRT2	Q9Y5R5	561 aa		17.48	■□□□□ 0.39
CNOT2-238	ENST00000552422	CNKSR2	Q8WXI2	1034 aa		17.21	■□□□□ 0.35
CNOT2-238	ENST00000552422	NCBP3	Q53F19	620 aa	Known RBP	17.09	■□□□□ 0.33
CNOT2-238	ENST00000552422	HOXD11	P31277	338 aa	Predicted RBP	16.97	■□□□□ 0.31
CNOT2-238	ENST00000552422	RNF216	Q9NWF9	866 aa	Predicted RBP	16.96	■□□□□ 0.31
CNOT2-238	ENST00000552422	DCAF8L1	A6NGE4	600 aa		16.82	■□□□□ 0.28
CNOT2-238	ENST00000552422	KCNA4	P22459	653 aa		16.82	■□□□□ 0.28
CNOT2-238	ENST00000552422	NPM3	O75607	178 aa	Known RBP	16.8	■□□□□ 0.28
CNOT2-238	ENST00000552422	DNAJC5B	Q9UF47	199 aa		16.3	■□□□□ 0.2
CNOT2-238	ENST00000552422	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	16.23	■□□□□ 0.19	1e-7	■□□□□ 8.2
CNOT2-238	ENST00000552422	RNF39	Q9H2S5	420 aa		16.23	■□□□□ 0.19
CNOT2-238	ENST00000552422	NISCH	Q9Y2I1	1504 aa		16.15	■□□□□ 0.18
CNOT2-238	ENST00000552422	CACNB1	Q02641	598 aa	Predicted RBP	16.11	■□□□□ 0.17
CNOT2-238	ENST00000552422	C1QBP	Q07021	282 aa	Known RBP	16.03	■□□□□ 0.16
CNOT2-238	ENST00000552422	SLC4A1AP	Q9BWU0	796 aa	Known RBP	15.97	■□□□□ 0.15
CNOT2-238	ENST00000552422	SLC4A2	P04920	1241 aa		15.94	■□□□□ 0.14
CNOT2-238	ENST00000552422		U3KPZ7	1027 aa	Predicted RBP	15.88	■□□□□ 0.13
CNOT2-238	ENST00000552422	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	15.6	■□□□□ 0.09
CNOT2-238	ENST00000552422	HNRNPUL2	Q1KMD3	747 aa	Known RBP	15.6	■□□□□ 0.09
CNOT2-238	ENST00000552422	FOXD4L1	Q9NU39	408 aa		15.59	■□□□□ 0.09
CNOT2-238	ENST00000552422	SPINK5	Q9NQ38	1064 aa	Predicted RBP	15.56	■□□□□ 0.08
CNOT2-238	ENST00000552422	CAPN15	O75808	1086 aa		15.55	■□□□□ 0.08
CNOT2-238	ENST00000552422	MYCN	P04198	464 aa	Predicted RBP	15.55	■□□□□ 0.08
CNOT2-238	ENST00000552422	APLP2	Q06481	763 aa		15.53	■□□□□ 0.08
CNOT2-238	ENST00000552422	SAMD1	Q6SPF0	538 aa	Predicted RBP	15.52	■□□□□ 0.08
CNOT2-238	ENST00000552422	ZBTB22	O15209	634 aa		15.44	■□□□□ 0.06
CNOT2-238	ENST00000552422	TRH	P20396	242 aa	Predicted RBP	15.39	■□□□□ 0.05
CNOT2-238	ENST00000552422	ZNF219	Q9P2Y4	722 aa	Predicted RBP	15.36	■□□□□ 0.05
CNOT2-238	ENST00000552422	DSG3	P32926	999 aa		15.33	■□□□□ 0.04
CNOT2-238	ENST00000552422	ABCB7	O75027	752 aa		15.22	■□□□□ 0.03
CNOT2-238	ENST00000552422	ATF5	Q9Y2D1	282 aa	Predicted RBP	15.14	■□□□□ 0.01
CNOT2-238	ENST00000552422	EHMT2	Q96KQ7	1210 aa		15.13	■□□□□ 0.01
CNOT2-238	ENST00000552422	CSRNP3	Q8WYN3	585 aa		15.07	■□□□□ 0
CNOT2-238	ENST00000552422	ATXN8OS	P0DMR3	200 aa		15.06	■□□□□ 0
CNOT2-238	ENST00000552422	POLA2	Q14181	598 aa		15.04	■□□□□ -0
CNOT2-238	ENST00000552422	ZBTB12	Q9Y330	459 aa	Predicted RBP	14.78	□□□□□ -0.04
CNOT2-238	ENST00000552422	RBM42	Q9BTD8	480 aa	Known RBP	14.65	□□□□□ -0.06
CNOT2-238	ENST00000552422	FBLN2	P98095	1184 aa		14.59	□□□□□ -0.07
CNOT2-238	ENST00000552422	OSCAR	Q8IYS5	282 aa		14.55	□□□□□ -0.08
CNOT2-238	ENST00000552422	MKRN4P	Q13434	485 aa	Predicted RBP	14.45	□□□□□ -0.1
CNOT2-238	ENST00000552422	CCDC180	Q9P1Z9	1646 aa		14.44	□□□□□ -0.1
CNOT2-238	ENST00000552422	AKT1S1	Q96B36	256 aa		14.37	□□□□□ -0.11
CNOT2-238	ENST00000552422	SPDYE2B	A6NHP3	402 aa		14.33	□□□□□ -0.12
CNOT2-238	ENST00000552422	SPDYE6	P0CI01	402 aa		14.33	□□□□□ -0.12
CNOT2-238	ENST00000552422	SPDYE2	Q495Y8	402 aa		14.33	□□□□□ -0.12
CNOT2-238	ENST00000552422	REM2	Q8IYK8	340 aa	Predicted RBP	14.23	□□□□□ -0.13
CNOT2-238	ENST00000552422	ZNF692	Q9BU19	519 aa	Predicted RBP	14.23	□□□□□ -0.13
CNOT2-238	ENST00000552422	CHRDL2	Q6WN34	429 aa		14.17	□□□□□ -0.14
CNOT2-238	ENST00000552422	SSUH2	Q9Y2M2	353 aa		14.16	□□□□□ -0.14
CNOT2-238	ENST00000552422	POTEH	Q6S545	545 aa		14.13	□□□□□ -0.15
CNOT2-238	ENST00000552422	PITPNM1	O00562	1244 aa		14.08	□□□□□ -0.16
CNOT2-238	ENST00000552422	PABPN1	Q86U42	306 aa	Known RBP eCLIP	14.04	□□□□□ -0.16
CNOT2-238	ENST00000552422	SPDYE4	A6NLX3	237 aa		14.01	□□□□□ -0.17
CNOT2-238	ENST00000552422	SPDYE1	Q8NFV5	336 aa	Predicted RBP	14.01	□□□□□ -0.17
CNOT2-238	ENST00000552422	CLEC11A	Q9Y240	323 aa		13.99	□□□□□ -0.17
CNOT2-238	ENST00000552422	ABCC9	O60706	1549 aa		13.93	□□□□□ -0.18
CNOT2-238	ENST00000552422	PIP4P2	Q8N4L2	257 aa		13.9	□□□□□ -0.18
CNOT2-238	ENST00000552422	FXR2	P51116	673 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
CNOT2-238	ENST00000552422	PRR29	P0C7W0	189 aa		13.8	□□□□□ -0.2
CNOT2-238	ENST00000552422	PRKAR2A	P13861	404 aa	Known RBP	13.73	□□□□□ -0.21
CNOT2-238	ENST00000552422	STAG3	Q9UJ98	1225 aa		13.73	□□□□□ -0.21
CNOT2-238	ENST00000552422	FKBP8	Q14318	412 aa		13.69	□□□□□ -0.22
CNOT2-238	ENST00000552422	PROM2	Q8N271	834 aa		13.66	□□□□□ -0.22
CNOT2-238	ENST00000552422	CHADL	Q6NUI6	762 aa		13.65	□□□□□ -0.22
CNOT2-238	ENST00000552422	HAX1	O00165	279 aa		13.58	□□□□□ -0.24
CNOT2-238	ENST00000552422	CREBZF	Q9NS37	354 aa		13.5	□□□□□ -0.25
CNOT2-238	ENST00000552422	RB1CC1	Q8TDY2	1594 aa		13.49	□□□□□ -0.25
CNOT2-238	ENST00000552422	ZCCHC6	Q5VYS8	1495 aa	Known RBP	13.49	□□□□□ -0.25
CNOT2-238	ENST00000552422	NACAD	O15069	1562 aa		13.49	□□□□□ -0.25
CNOT2-238	ENST00000552422	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.48	□□□□□ -0.25
CNOT2-238	ENST00000552422	MYO15B	Q96JP2	1530 aa		13.44	□□□□□ -0.26
CNOT2-238	ENST00000552422	C19orf67	A6NJJ6	358 aa		13.41	□□□□□ -0.26
CNOT2-238	ENST00000552422	SP7	Q8TDD2	431 aa	Predicted RBP	13.41	□□□□□ -0.26
CNOT2-238	ENST00000552422	DCAF1	Q9Y4B6	1507 aa		13.4	□□□□□ -0.26
CNOT2-238	ENST00000552422	EVX2	Q03828	476 aa		13.39	□□□□□ -0.27
CNOT2-238	ENST00000552422	MIER1	Q8N108	512 aa		13.34	□□□□□ -0.27
CNOT2-238	ENST00000552422	PLEKHG5	O94827	1062 aa		13.33	□□□□□ -0.28
CNOT2-238	ENST00000552422	CD44	P16070	742 aa	Known RBP	13.33	□□□□□ -0.28
CNOT2-238	ENST00000552422	UNC13A	Q9UPW8	1703 aa		13.33	□□□□□ -0.28
CNOT2-238	ENST00000552422	DCAF8L2	P0C7V8	631 aa		13.31	□□□□□ -0.28
CNOT2-238	ENST00000552422	NPM1	P06748	294 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
CNOT2-238	ENST00000552422	FBXO3	Q9UK99	471 aa		13.3	□□□□□ -0.28
CNOT2-238	ENST00000552422	MNX1	P50219	401 aa	Predicted RBP	13.29	□□□□□ -0.28
CNOT2-238	ENST00000552422	PLCD3	Q8N3E9	789 aa		13.29	□□□□□ -0.28
CNOT2-238	ENST00000552422	ZRANB1	Q9UGI0	708 aa		13.21	□□□□□ -0.29
CNOT2-238	ENST00000552422	PAK3	O75914	559 aa	Predicted RBP	13.2	□□□□□ -0.3

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