RNA–Protein interactions for RNA: ENST00000428214.5

PEX1-203, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 1 (best) BASIC

Gene PEX1, Length 3,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-203ENST00000428214 NISCHQ9Y2I1 1504 aa25.11■■□□□ 1.61
PEX1-203ENST00000428214 CCDC180Q9P1Z9 1646 aa21.65■■□□□ 1.06
PEX1-203ENST00000428214 ZCCHC6Q5VYS8 1495 aaKnown RBP21.1■□□□□ 0.97
PEX1-203ENST00000428214 DCAF8L2P0C7V8 631 aa21.08■□□□□ 0.97
PEX1-203ENST00000428214 SHROOM4Q9ULL8 1493 aa20.99■□□□□ 0.95
PEX1-203ENST00000428214 ABCC9O60706 1549 aa20.82■□□□□ 0.92
PEX1-203ENST00000428214 DCAF1Q9Y4B6 1507 aa20.52■□□□□ 0.87
PEX1-203ENST00000428214 SCRIBQ14160 1630 aa20.3■□□□□ 0.84
PEX1-203ENST00000428214 MYO15BQ96JP2 1530 aa20.17■□□□□ 0.82
PEX1-203ENST00000428214 NACADO15069 1562 aa20.17■□□□□ 0.82
PEX1-203ENST00000428214 SUPT5HO00267 1087 aaKnown RBP20.16■□□□□ 0.82
PEX1-203ENST00000428214 RB1CC1Q8TDY2 1594 aa20.03■□□□□ 0.8
PEX1-203ENST00000428214 UNC13AQ9UPW8 1703 aa19.88■□□□□ 0.77
PEX1-203ENST00000428214 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
PEX1-203ENST00000428214 CECR2Q9BXF3 1484 aa19.74■□□□□ 0.75
PEX1-203ENST00000428214 BICRAQ9NZM4 1560 aa19.63■□□□□ 0.73
PEX1-203ENST00000428214 RSF1Q96T23 1441 aaPredicted RBP19.61■□□□□ 0.73
PEX1-203ENST00000428214 MROH2BQ7Z745 1585 aa19.56■□□□□ 0.72
PEX1-203ENST00000428214 WIZO95785 1651 aa19.44■□□□□ 0.7
PEX1-203ENST00000428214 BAZ1AQ9NRL2 1556 aaPredicted RBP19.3■□□□□ 0.68
PEX1-203ENST00000428214 SMARCA4P51532 1647 aa19.3■□□□□ 0.68
PEX1-203ENST00000428214 CHIC1Q5VXU3 224 aa19.2■□□□□ 0.66
PEX1-203ENST00000428214 TOP2AP11388 1531 aaKnown RBP19.01■□□□□ 0.63
PEX1-203ENST00000428214 EIF4G1Q04637 1599 aaKnown RBP18.98■□□□□ 0.63
PEX1-203ENST00000428214 ATAD2BQ9ULI0 1458 aa18.97■□□□□ 0.63
PEX1-203ENST00000428214 CCDC88BA6NC98 1476 aa18.96■□□□□ 0.63
PEX1-203ENST00000428214 SMARCA2P51531 1590 aa18.94■□□□□ 0.62
PEX1-203ENST00000428214 PEG3Q9GZU2 1588 aa18.92■□□□□ 0.62
PEX1-203ENST00000428214 BAZ1BQ9UIG0 1483 aaKnown RBP18.86■□□□□ 0.61
PEX1-203ENST00000428214 ABCC8Q09428 1581 aa18.75■□□□□ 0.59
PEX1-203ENST00000428214 TRIM41Q8WV44 630 aa18.75■□□□□ 0.59
PEX1-203ENST00000428214 CC2D2AQ9P2K1 1620 aa18.73■□□□□ 0.59
PEX1-203ENST00000428214 LOC105371045A0A1W2PR82 267 aa18.69■□□□□ 0.58
PEX1-203ENST00000428214 FAM9AQ8IZU1 332 aaPredicted RBP18.69■□□□□ 0.58
PEX1-203ENST00000428214 NCAPD3P42695 1498 aa18.69■□□□□ 0.58
PEX1-203ENST00000428214 DNAJC5BQ9UF47 199 aa18.66■□□□□ 0.58
PEX1-203ENST00000428214 EHMT2Q96KQ7 1210 aa18.64■□□□□ 0.58
PEX1-203ENST00000428214 HMGXB3Q12766 1538 aa18.62■□□□□ 0.57
PEX1-203ENST00000428214 SYNJ1O43426 1573 aa18.44■□□□□ 0.54
PEX1-203ENST00000428214 WRNQ14191 1432 aaPredicted RBP eCLIP18.4■□□□□ 0.54
PEX1-203ENST00000428214 RUSC2Q8N2Y8 1516 aa18.4■□□□□ 0.54
PEX1-203ENST00000428214 SOGA1O94964 1423 aa18.39■□□□□ 0.53
PEX1-203ENST00000428214 NESP48681 1621 aa18.37■□□□□ 0.53
PEX1-203ENST00000428214 CFTRP13569 1480 aa18.36■□□□□ 0.53
PEX1-203ENST00000428214 CADPSQ9ULU8 1353 aa18.28■□□□□ 0.52
PEX1-203ENST00000428214 CUX1P39880 1505 aa18.25■□□□□ 0.51
PEX1-203ENST00000428214 TOP2BQ02880 1626 aa18.19■□□□□ 0.5
PEX1-203ENST00000428214 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
PEX1-203ENST00000428214 BIVM-ERCC5R4GMW8 1640 aa18.14■□□□□ 0.49
PEX1-203ENST00000428214 FANCD2Q9BXW9 1451 aa18.14■□□□□ 0.49
PEX1-203ENST00000428214 CSRNP3Q8WYN3 585 aa18.09■□□□□ 0.49
PEX1-203ENST00000428214 KIF21AQ7Z4S6 1674 aa18.02■□□□□ 0.48
PEX1-203ENST00000428214 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
PEX1-203ENST00000428214 LAMC3Q9Y6N6 1575 aa18.01■□□□□ 0.47
PEX1-203ENST00000428214 RAD54L2Q9Y4B4 1467 aa17.98■□□□□ 0.47
PEX1-203ENST00000428214 URB2Q14146 1524 aaKnown RBP17.97■□□□□ 0.47
PEX1-203ENST00000428214 UBTFP17480 764 aaKnown RBP17.97■□□□□ 0.47
PEX1-203ENST00000428214 RANGAP1P46060 587 aaPredicted RBP17.96■□□□□ 0.47
PEX1-203ENST00000428214 PPARGC1BQ86YN6 1023 aaKnown RBP17.96■□□□□ 0.47
PEX1-203ENST00000428214 CEP164Q9UPV0 1460 aa17.96■□□□□ 0.47
PEX1-203ENST00000428214 RAPGEF2Q9Y4G8 1499 aa17.96■□□□□ 0.47
PEX1-203ENST00000428214 TOPBP1Q92547 1522 aa17.95■□□□□ 0.46
PEX1-203ENST00000428214 EEA1Q15075 1411 aa17.93■□□□□ 0.46
PEX1-203ENST00000428214 CUX2O14529 1486 aa17.91■□□□□ 0.46
PEX1-203ENST00000428214 POLA1P09884 1462 aaPredicted RBP17.9■□□□□ 0.46
PEX1-203ENST00000428214 DNMBPQ6XZF7 1577 aa17.9■□□□□ 0.46
PEX1-203ENST00000428214 PDS5BQ9NTI5 1447 aa17.88■□□□□ 0.45
PEX1-203ENST00000428214 CEP162Q5TB80 1403 aa17.87■□□□□ 0.45
PEX1-203ENST00000428214 GOLGA3Q08378 1498 aa17.87■□□□□ 0.45
PEX1-203ENST00000428214 PCGF6Q9BYE7 350 aa17.85■□□□□ 0.45
PEX1-203ENST00000428214 KIF27Q86VH2 1401 aa17.85■□□□□ 0.45
PEX1-203ENST00000428214 KIF21BO75037 1637 aa17.84■□□□□ 0.45
PEX1-203ENST00000428214 TNIKQ9UKE5 1360 aa17.82■□□□□ 0.44
PEX1-203ENST00000428214 TTBK1Q5TCY1 1321 aaPredicted RBP17.81■□□□□ 0.44
PEX1-203ENST00000428214 PRXQ9BXM0 1461 aa17.8■□□□□ 0.44
PEX1-203ENST00000428214 IGF1RP08069 1367 aa17.8■□□□□ 0.44
PEX1-203ENST00000428214 TDRD9Q8NDG6 1382 aaKnown RBP17.79■□□□□ 0.44
PEX1-203ENST00000428214 ABCA10Q8WWZ4 1543 aa17.73■□□□□ 0.43
PEX1-203ENST00000428214 WDR97A6NE52 1622 aa17.7■□□□□ 0.42
PEX1-203ENST00000428214 ERCC6Q03468 1493 aa17.7■□□□□ 0.42
PEX1-203ENST00000428214 MRC2Q9UBG0 1479 aa17.7■□□□□ 0.42
PEX1-203ENST00000428214 CLIP1P30622 1438 aa17.68■□□□□ 0.42
PEX1-203ENST00000428214 CARMIL1Q5VZK9 1371 aa17.67■□□□□ 0.42
PEX1-203ENST00000428214 TARBP1Q13395 1621 aaKnown RBP17.67■□□□□ 0.42
PEX1-203ENST00000428214 ERICH3Q5RHP9 1530 aa17.66■□□□□ 0.42
PEX1-203ENST00000428214 AQRO60306 1485 aaKnown RBP eCLIP17.65■□□□□ 0.42
PEX1-203ENST00000428214 ZNF608Q9ULD9 1512 aaPredicted RBP17.65■□□□□ 0.42
PEX1-203ENST00000428214 ABCA5Q8WWZ7 1642 aa17.62■□□□□ 0.41
PEX1-203ENST00000428214 THOC2Q8NI27 1593 aaKnown RBP17.61■□□□□ 0.41
PEX1-203ENST00000428214 WDR62O43379 1518 aa17.6■□□□□ 0.41
PEX1-203ENST00000428214 GAPVD1Q14C86 1478 aa17.6■□□□□ 0.41
PEX1-203ENST00000428214 ARAP1Q96P48 1450 aa17.56■□□□□ 0.4
PEX1-203ENST00000428214 TRIM26Q12899 539 aaPredicted RBP17.56■□□□□ 0.4
PEX1-203ENST00000428214 P3H3Q8IVL6 736 aa17.55■□□□□ 0.4
PEX1-203ENST00000428214 ARHGAP35Q9NRY4 1499 aa17.51■□□□□ 0.39
PEX1-203ENST00000428214 PBRM1Q86U86 1689 aa17.5■□□□□ 0.39
PEX1-203ENST00000428214 VPS8Q8N3P4 1428 aa17.48■□□□□ 0.39
PEX1-203ENST00000428214 CUL7Q14999 1698 aa17.47■□□□□ 0.39
PEX1-203ENST00000428214 EIF4G3O43432 1585 aaKnown RBP17.46■□□□□ 0.38
PEX1-203ENST00000428214 IFT140Q96RY7 1462 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms