RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 AEBP2Q6ZN18 517 aaPredicted RBP34.02■■■■□ 3.04
SNF8-211ENST00000512243 CHIC1Q5VXU3 224 aa32.7■■■□□ 2.83
SNF8-211ENST00000512243 SENP3Q9H4L4 574 aaPredicted RBP28.88■■■□□ 2.21
SNF8-211ENST00000512243 PHF23Q9BUL5 403 aaPredicted RBP28.74■■■□□ 2.19
SNF8-211ENST00000512243 FOXD1Q16676 465 aa26.91■■□□□ 1.9
SNF8-211ENST00000512243 PLPPR3Q6T4P5 718 aa26.32■■□□□ 1.8
SNF8-211ENST00000512243 PPP6R1Q9UPN7 881 aa25.54■■□□□ 1.68
SNF8-211ENST00000512243 ADRA2BP18089 450 aa25.5■■□□□ 1.67
SNF8-211ENST00000512243 PIAS4Q8N2W9 510 aaPredicted RBP25.28■■□□□ 1.64
SNF8-211ENST00000512243 MSH5O43196 834 aa24.94■■□□□ 1.58
SNF8-211ENST00000512243 POTEDQ86YR6 584 aa23.62■■□□□ 1.37
SNF8-211ENST00000512243 MAPK8IP2Q13387 824 aaPredicted RBP23.29■■□□□ 1.32
SNF8-211ENST00000512243 SCAF1Q9H7N4 1312 aaKnown RBP23.23■■□□□ 1.31
SNF8-211ENST00000512243 PPP4R3CPQ6ZMV5 832 aa23.17■■□□□ 1.3
SNF8-211ENST00000512243 DMRT2Q9Y5R5 561 aa22.98■■□□□ 1.27
SNF8-211ENST00000512243 CNKSR2Q8WXI2 1034 aa22.59■■□□□ 1.21
SNF8-211ENST00000512243 NCBP3Q53F19 620 aaKnown RBP22.37■■□□□ 1.17
SNF8-211ENST00000512243 NISCHQ9Y2I1 1504 aa22.31■■□□□ 1.16
SNF8-211ENST00000512243 HOXD11P31277 338 aaPredicted RBP22.29■■□□□ 1.16
SNF8-211ENST00000512243 RNF216Q9NWF9 866 aaPredicted RBP22.25■■□□□ 1.15
SNF8-211ENST00000512243 KCNA4P22459 653 aa22.13■■□□□ 1.13
SNF8-211ENST00000512243 DCAF8L1A6NGE4 600 aa22.12■■□□□ 1.13
SNF8-211ENST00000512243 NPM3O75607 178 aaKnown RBP22.1■■□□□ 1.13
SNF8-211ENST00000512243 DNAJC5BQ9UF47 199 aa21.38■■□□□ 1.01
SNF8-211ENST00000512243 RNF39Q9H2S5 420 aa21.35■■□□□ 1.01
SNF8-211ENST00000512243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.31■■□□□ 11e-6■■■■□ 19.4
SNF8-211ENST00000512243 CACNB1Q02641 598 aaPredicted RBP21.18■□□□□ 0.98
SNF8-211ENST00000512243 C1QBPQ07021 282 aaKnown RBP21.03■□□□□ 0.96
SNF8-211ENST00000512243 SLC4A2P04920 1241 aa21■□□□□ 0.95
SNF8-211ENST00000512243 SLC4A1APQ9BWU0 796 aaKnown RBP20.96■□□□□ 0.95
SNF8-211ENST00000512243 U3KPZ7 1027 aaPredicted RBP20.91■□□□□ 0.94
SNF8-211ENST00000512243 SPINK5Q9NQ38 1064 aaPredicted RBP20.51■□□□□ 0.87
SNF8-211ENST00000512243 FOXD4L1Q9NU39 408 aa20.46■□□□□ 0.87
SNF8-211ENST00000512243 CAPN15O75808 1086 aa20.44■□□□□ 0.86
SNF8-211ENST00000512243 MYCNP04198 464 aaPredicted RBP20.41■□□□□ 0.86
SNF8-211ENST00000512243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.4■□□□□ 0.86
SNF8-211ENST00000512243 HNRNPUL2Q1KMD3 747 aaKnown RBP20.4■□□□□ 0.86
SNF8-211ENST00000512243 ZBTB22O15209 634 aa20.36■□□□□ 0.85
SNF8-211ENST00000512243 SAMD1Q6SPF0 538 aaPredicted RBP20.33■□□□□ 0.85
SNF8-211ENST00000512243 APLP2Q06481 763 aa20.29■□□□□ 0.84
SNF8-211ENST00000512243 TRHP20396 242 aaPredicted RBP20.24■□□□□ 0.83
SNF8-211ENST00000512243 DSG3P32926 999 aa20.16■□□□□ 0.82
SNF8-211ENST00000512243 ZNF219Q9P2Y4 722 aaPredicted RBP20.14■□□□□ 0.81
SNF8-211ENST00000512243 ABCB7O75027 752 aa20.05■□□□□ 0.8
SNF8-211ENST00000512243 ATF5Q9Y2D1 282 aaPredicted RBP19.96■□□□□ 0.79
SNF8-211ENST00000512243 EHMT2Q96KQ7 1210 aa19.89■□□□□ 0.77
SNF8-211ENST00000512243 CSRNP3Q8WYN3 585 aa19.82■□□□□ 0.76
SNF8-211ENST00000512243 CCDC180Q9P1Z9 1646 aa19.8■□□□□ 0.76
SNF8-211ENST00000512243 POLA2Q14181 598 aa19.76■□□□□ 0.75
SNF8-211ENST00000512243 ATXN8OSP0DMR3 200 aa19.71■□□□□ 0.75
SNF8-211ENST00000512243 ZBTB12Q9Y330 459 aaPredicted RBP19.32■□□□□ 0.68
SNF8-211ENST00000512243 RBM42Q9BTD8 480 aaKnown RBP19.19■□□□□ 0.66
SNF8-211ENST00000512243 OSCARQ8IYS5 282 aa19.15■□□□□ 0.66
SNF8-211ENST00000512243 FBLN2P98095 1184 aa19.09■□□□□ 0.65
SNF8-211ENST00000512243 MKRN4PQ13434 485 aaPredicted RBP19.05■□□□□ 0.64
SNF8-211ENST00000512243 ABCC9O60706 1549 aa19.02■□□□□ 0.64
SNF8-211ENST00000512243 AKT1S1Q96B36 256 aa18.85■□□□□ 0.61
SNF8-211ENST00000512243 SPDYE2BA6NHP3 402 aa18.79■□□□□ 0.6
SNF8-211ENST00000512243 SPDYE6P0CI01 402 aa18.79■□□□□ 0.6
SNF8-211ENST00000512243 SPDYE2Q495Y8 402 aa18.79■□□□□ 0.6
SNF8-211ENST00000512243 REM2Q8IYK8 340 aaPredicted RBP18.71■□□□□ 0.59
SNF8-211ENST00000512243 ZNF692Q9BU19 519 aaPredicted RBP18.68■□□□□ 0.58
SNF8-211ENST00000512243 ZCCHC6Q5VYS8 1495 aaKnown RBP18.67■□□□□ 0.58
SNF8-211ENST00000512243 CHRDL2Q6WN34 429 aa18.63■□□□□ 0.57
SNF8-211ENST00000512243 SSUH2Q9Y2M2 353 aa18.6■□□□□ 0.57
SNF8-211ENST00000512243 POTEHQ6S545 545 aa18.59■□□□□ 0.57
SNF8-211ENST00000512243 PITPNM1O00562 1244 aa18.53■□□□□ 0.56
SNF8-211ENST00000512243 NACADO15069 1562 aa18.5■□□□□ 0.55
SNF8-211ENST00000512243 DCAF1Q9Y4B6 1507 aa18.49■□□□□ 0.55
SNF8-211ENST00000512243 RB1CC1Q8TDY2 1594 aa18.47■□□□□ 0.55
SNF8-211ENST00000512243 DCAF8L2P0C7V8 631 aa18.46■□□□□ 0.55
SNF8-211ENST00000512243 MYO15BQ96JP2 1530 aa18.45■□□□□ 0.54
SNF8-211ENST00000512243 PABPN1Q86U42 306 aaKnown RBP eCLIP18.44■□□□□ 0.54
SNF8-211ENST00000512243 SPDYE4A6NLX3 237 aa18.38■□□□□ 0.53
SNF8-211ENST00000512243 CLEC11AQ9Y240 323 aa18.38■□□□□ 0.53
SNF8-211ENST00000512243 SPDYE1Q8NFV5 336 aaPredicted RBP18.36■□□□□ 0.53
SNF8-211ENST00000512243 PIP4P2Q8N4L2 257 aa18.3■□□□□ 0.52
SNF8-211ENST00000512243 FXR2P51116 673 aaKnown RBP eCLIP18.23■□□□□ 0.51
SNF8-211ENST00000512243 UNC13AQ9UPW8 1703 aa18.12■□□□□ 0.49
SNF8-211ENST00000512243 PRR29P0C7W0 189 aa18.1■□□□□ 0.49
SNF8-211ENST00000512243 SCRIBQ14160 1630 aa18.07■□□□□ 0.48
SNF8-211ENST00000512243 PRKAR2AP13861 404 aaKnown RBP18.06■□□□□ 0.48
SNF8-211ENST00000512243 CHADLQ6NUI6 762 aa18■□□□□ 0.47
SNF8-211ENST00000512243 FKBP8Q14318 412 aa17.98■□□□□ 0.47
SNF8-211ENST00000512243 STAG3Q9UJ98 1225 aa17.95■□□□□ 0.46
SNF8-211ENST00000512243 PROM2Q8N271 834 aa17.94■□□□□ 0.46
SNF8-211ENST00000512243 HAX1O00165 279 aa17.86■□□□□ 0.45
SNF8-211ENST00000512243 BICRAQ9NZM4 1560 aa17.86■□□□□ 0.45
SNF8-211ENST00000512243 SHROOM4Q9ULL8 1493 aa17.77■□□□□ 0.44
SNF8-211ENST00000512243 CREBZFQ9NS37 354 aa17.76■□□□□ 0.43
SNF8-211ENST00000512243 FARP1Q9Y4F1 1045 aaPredicted RBP17.72■□□□□ 0.43
SNF8-211ENST00000512243 EVX2Q03828 476 aa17.69■□□□□ 0.42
SNF8-211ENST00000512243 SP7Q8TDD2 431 aaPredicted RBP17.64■□□□□ 0.41
SNF8-211ENST00000512243 C19orf67A6NJJ6 358 aa17.63■□□□□ 0.41
SNF8-211ENST00000512243 CD44P16070 742 aaKnown RBP17.51■□□□□ 0.39
SNF8-211ENST00000512243 MNX1P50219 401 aaPredicted RBP17.5■□□□□ 0.39
SNF8-211ENST00000512243 MIER1Q8N108 512 aa17.49■□□□□ 0.39
SNF8-211ENST00000512243 PLCD3Q8N3E9 789 aa17.42■□□□□ 0.38
SNF8-211ENST00000512243 NPM1P06748 294 aaKnown RBP eCLIP17.41■□□□□ 0.38
SNF8-211ENST00000512243 PLEKHG5O94827 1062 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms