RNA–Protein interactions for RNA: ENST00000618666.4

CCNT1-205, Transcript of cyclin T1, humanhuman

TSL 2 BASIC

Gene CCNT1, Length 6,915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-205ENST00000618666 MYT1Q01538 1121 aa9.26□□□□□ -0.93
CCNT1-205ENST00000618666 PELP1Q8IZL8 1130 aaKnown RBP8.95□□□□□ -0.98
CCNT1-205ENST00000618666 EHMT2Q96KQ7 1210 aa8.86□□□□□ -0.99
CCNT1-205ENST00000618666 ERICH6Q7L0X2 663 aa8.81□□□□□ -1
CCNT1-205ENST00000618666 YTHDC1Q96MU7 727 aaKnown RBP8.79□□□□□ -1
CCNT1-205ENST00000618666 PCGF6Q9BYE7 350 aa8.73□□□□□ -1.01
CCNT1-205ENST00000618666 PPARGC1BQ86YN6 1023 aaKnown RBP8.63□□□□□ -1.03
CCNT1-205ENST00000618666 TTBK1Q5TCY1 1321 aaPredicted RBP8.6□□□□□ -1.03
CCNT1-205ENST00000618666 CENPBP07199 599 aaPredicted RBP8.5□□□□□ -1.05
CCNT1-205ENST00000618666 SUPT5HO00267 1087 aaKnown RBP8.48□□□□□ -1.05
CCNT1-205ENST00000618666 RANGAP1P46060 587 aaPredicted RBP8.48□□□□□ -1.05
CCNT1-205ENST00000618666 EIF5BO60841 1220 aaKnown RBP8.46□□□□□ -1.06
CCNT1-205ENST00000618666 DCAF8L2P0C7V8 631 aa8.33□□□□□ -1.08
CCNT1-205ENST00000618666 BCANQ96GW7 911 aa8.33□□□□□ -1.08
CCNT1-205ENST00000618666 GTF3C3Q9Y5Q9 886 aa8.33□□□□□ -1.08
CCNT1-205ENST00000618666 CCER1Q8TC90 406 aaPredicted RBP8.29□□□□□ -1.08
CCNT1-205ENST00000618666 HRCP23327 699 aa8.24□□□□□ -1.09
CCNT1-205ENST00000618666 BCL11AQ9H165 835 aa8.22□□□□□ -1.09
CCNT1-205ENST00000618666 RTN4Q9NQC3 1192 aaKnown RBP8.19□□□□□ -1.1
CCNT1-205ENST00000618666 FAM9AQ8IZU1 332 aaPredicted RBP8.18□□□□□ -1.1
CCNT1-205ENST00000618666 NEFLP07196 543 aa8.18□□□□□ -1.1
CCNT1-205ENST00000618666 AMER1Q5JTC6 1135 aaPredicted RBP8.17□□□□□ -1.1
CCNT1-205ENST00000618666 CNGB1Q14028 1251 aaPredicted RBP8.15□□□□□ -1.1
CCNT1-205ENST00000618666 RTL5Q5HYW3 569 aaPredicted RBP8.13□□□□□ -1.11
CCNT1-205ENST00000618666 SCAF1Q9H7N4 1312 aaKnown RBP8.12□□□□□ -1.11
CCNT1-205ENST00000618666 SHROOM4Q9ULL8 1493 aa8.1□□□□□ -1.11
CCNT1-205ENST00000618666 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.09□□□□□ -1.11
CCNT1-205ENST00000618666 NBR1Q14596 966 aa8.08□□□□□ -1.12
CCNT1-205ENST00000618666 CCDC136Q96JN2 1154 aa8.08□□□□□ -1.12
CCNT1-205ENST00000618666 ARXQ96QS3 562 aa8.04□□□□□ -1.12
CCNT1-205ENST00000618666 DAXXQ9UER7 740 aaPredicted RBP8.03□□□□□ -1.12
CCNT1-205ENST00000618666 NISCHQ9Y2I1 1504 aa8.02□□□□□ -1.13
CCNT1-205ENST00000618666 PRKCSHP14314 528 aaPredicted RBP8.01□□□□□ -1.13
CCNT1-205ENST00000618666 MYT1LQ9UL68 1186 aa7.96□□□□□ -1.13
CCNT1-205ENST00000618666 ACIN1Q9UKV3 1341 aaKnown RBP7.95□□□□□ -1.14
CCNT1-205ENST00000618666 DIEXFQ68CQ4 756 aaKnown RBP7.94□□□□□ -1.14
CCNT1-205ENST00000618666 ZEB1P37275 1124 aaPredicted RBP7.94□□□□□ -1.14
CCNT1-205ENST00000618666 NEUROD1Q13562 356 aa7.94□□□□□ -1.14
CCNT1-205ENST00000618666 NPM2Q86SE8 214 aaKnown RBP7.93□□□□□ -1.14
CCNT1-205ENST00000618666 ARID4BQ4LE39 1312 aaPredicted RBP7.93□□□□□ -1.14
CCNT1-205ENST00000618666 ZNF316A6NFI3 1004 aaPredicted RBP7.91□□□□□ -1.14
CCNT1-205ENST00000618666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.9□□□□□ -1.15
CCNT1-205ENST00000618666 A0A0U1RQG5 324 aaPredicted RBP7.89□□□□□ -1.15
CCNT1-205ENST00000618666 GLIPR1L2Q4G1C9 344 aa7.89□□□□□ -1.15
CCNT1-205ENST00000618666 ITGAEP38570 1179 aa7.86□□□□□ -1.15
CCNT1-205ENST00000618666 POLR3GLQ9BT43 218 aa7.85□□□□□ -1.15
CCNT1-205ENST00000618666 ANP32EQ9BTT0 268 aa7.83□□□□□ -1.16
CCNT1-205ENST00000618666 ARID3AQ99856 593 aa7.82□□□□□ -1.16
CCNT1-205ENST00000618666 CSRNP3Q8WYN3 585 aa7.82□□□□□ -1.16
CCNT1-205ENST00000618666 LOC105371045A0A1W2PR82 267 aa7.8□□□□□ -1.16
CCNT1-205ENST00000618666 CLSPNQ9HAW4 1339 aa7.78□□□□□ -1.16
CCNT1-205ENST00000618666 ANO8Q9HCE9 1232 aaPredicted RBP7.77□□□□□ -1.17
CCNT1-205ENST00000618666 CDK11AQ9UQ88 783 aaPredicted RBP7.76□□□□□ -1.17
CCNT1-205ENST00000618666 FKBP8Q14318 412 aa7.75□□□□□ -1.17
CCNT1-205ENST00000618666 TRIM26Q12899 539 aaPredicted RBP7.74□□□□□ -1.17
CCNT1-205ENST00000618666 IRX6P78412 446 aaPredicted RBP7.74□□□□□ -1.17
CCNT1-205ENST00000618666 APLP2Q06481 763 aa7.74□□□□□ -1.17
CCNT1-205ENST00000618666 PODXL2Q9NZ53 605 aa7.73□□□□□ -1.17
CCNT1-205ENST00000618666 TIMELESSQ9UNS1 1208 aa7.72□□□□□ -1.17
CCNT1-205ENST00000618666 HNRNPUL2Q1KMD3 747 aaKnown RBP7.69□□□□□ -1.18
CCNT1-205ENST00000618666 NAP1L5Q96NT1 182 aaPredicted RBP7.68□□□□□ -1.18
CCNT1-205ENST00000618666 VSIG10Q8N0Z9 540 aa7.67□□□□□ -1.18
CCNT1-205ENST00000618666 DEKP35659 375 aaKnown RBP7.67□□□□□ -1.18
CCNT1-205ENST00000618666 ZBTB7CA1YPR0 619 aa7.67□□□□□ -1.18
CCNT1-205ENST00000618666 SLC24A1O60721 1099 aa7.66□□□□□ -1.18
CCNT1-205ENST00000618666 ATP1B4Q9UN42 357 aaPredicted RBP7.65□□□□□ -1.19
CCNT1-205ENST00000618666 SENP3-EIF4A1A0A087X0R7 540 aa7.64□□□□□ -1.19
CCNT1-205ENST00000618666 PLEKHG5O94827 1062 aa7.63□□□□□ -1.19
CCNT1-205ENST00000618666 ANP32AP39687 249 aaKnown RBP7.63□□□□□ -1.19
CCNT1-205ENST00000618666 LAS1LQ9Y4W2 734 aaKnown RBP7.62□□□□□ -1.19
CCNT1-205ENST00000618666 PKNOX2Q96KN3 472 aa7.59□□□□□ -1.19
CCNT1-205ENST00000618666 CDK11BP21127 795 aaKnown RBP7.59□□□□□ -1.19
CCNT1-205ENST00000618666 SALL2Q9Y467 1007 aaPredicted RBP7.59□□□□□ -1.19
CCNT1-205ENST00000618666 MAPK8IP2Q13387 824 aaPredicted RBP7.56□□□□□ -1.2
CCNT1-205ENST00000618666 ZBTB47Q9UFB7 747 aaPredicted RBP7.56□□□□□ -1.2
CCNT1-205ENST00000618666 USP35Q9P2H5 1018 aa7.55□□□□□ -1.2
CCNT1-205ENST00000618666 TPRNQ4KMQ1 711 aa7.55□□□□□ -1.2
CCNT1-205ENST00000618666 NEFMP07197 916 aa7.54□□□□□ -1.2
CCNT1-205ENST00000618666 TRIM52Q96A61 297 aa7.54□□□□□ -1.2
CCNT1-205ENST00000618666 MIER1Q8N108 512 aa7.49□□□□□ -1.21
CCNT1-205ENST00000618666 UBTFP17480 764 aaKnown RBP7.46□□□□□ -1.21
CCNT1-205ENST00000618666 ZNF526Q8TF50 670 aaPredicted RBP7.46□□□□□ -1.21
CCNT1-205ENST00000618666 TRIM41Q8WV44 630 aa7.46□□□□□ -1.22
CCNT1-205ENST00000618666 TNNT2P45379 298 aaPredicted RBP7.46□□□□□ -1.22
CCNT1-205ENST00000618666 HAP1P54257 671 aaPredicted RBP7.45□□□□□ -1.22
CCNT1-205ENST00000618666 ANP32BQ92688 251 aaKnown RBP7.42□□□□□ -1.22
CCNT1-205ENST00000618666 HSP90AA1P07900 732 aaKnown RBP7.41□□□□□ -1.22
CCNT1-205ENST00000618666 RBM19Q9Y4C8 960 aaKnown RBP7.41□□□□□ -1.22
CCNT1-205ENST00000618666 SLC4A1APQ9BWU0 796 aaKnown RBP7.4□□□□□ -1.22
CCNT1-205ENST00000618666 DNTTIP2Q5QJE6 756 aaKnown RBP7.4□□□□□ -1.22
CCNT1-205ENST00000618666 SUPT16HQ9Y5B9 1047 aaKnown RBP7.4□□□□□ -1.22
CCNT1-205ENST00000618666 ZNF326Q5BKZ1 582 aaKnown RBP7.4□□□□□ -1.23
CCNT1-205ENST00000618666 IL27Q8NEV9 243 aa7.4□□□□□ -1.23
CCNT1-205ENST00000618666 CHIC1Q5VXU3 224 aa7.39□□□□□ -1.23
CCNT1-205ENST00000618666 TRIM44Q96DX7 344 aaPredicted RBP7.39□□□□□ -1.23
CCNT1-205ENST00000618666 HIRIP3Q9BW71 556 aaPredicted RBP7.38□□□□□ -1.23
CCNT1-205ENST00000618666 TSHZ2Q9NRE2 1034 aa7.38□□□□□ -1.23
CCNT1-205ENST00000618666 HNRNPUQ00839 825 aaKnown RBP eCLIP7.37□□□□□ -1.23
CCNT1-205ENST00000618666 HSP90AA2PQ14568 343 aaPredicted RBP7.36□□□□□ -1.23
CCNT1-205ENST00000618666 NOP58Q9Y2X3 529 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms