RNA–Protein interactions for RNA: ENST00000549443.5

CNOT2-217, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 4

Gene CNOT2, Length 457 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-217ENST00000549443 AEBP2Q6ZN18 517 aaPredicted RBP22.09■■□□□ 1.13
CNOT2-217ENST00000549443 CHIC1Q5VXU3 224 aa21.67■■□□□ 1.06
CNOT2-217ENST00000549443 PHF23Q9BUL5 403 aaPredicted RBP19.05■□□□□ 0.64
CNOT2-217ENST00000549443 SENP3Q9H4L4 574 aaPredicted RBP18.75■□□□□ 0.59
CNOT2-217ENST00000549443 PLPPR3Q6T4P5 718 aa17.66■□□□□ 0.42
CNOT2-217ENST00000549443 NISCHQ9Y2I1 1504 aa17.59■□□□□ 0.41
CNOT2-217ENST00000549443 FOXD1Q16676 465 aa17.38■□□□□ 0.37
CNOT2-217ENST00000549443 ADRA2BP18089 450 aa16.81■□□□□ 0.28
CNOT2-217ENST00000549443 PPP6R1Q9UPN7 881 aa16.8■□□□□ 0.28
CNOT2-217ENST00000549443 PIAS4Q8N2W9 510 aaPredicted RBP16.45■□□□□ 0.22
CNOT2-217ENST00000549443 MSH5O43196 834 aa16.01■□□□□ 0.15
CNOT2-217ENST00000549443 PPP4R3CPQ6ZMV5 832 aa15.58■□□□□ 0.08
CNOT2-217ENST00000549443 SCAF1Q9H7N4 1312 aaKnown RBP15.4■□□□□ 0.06
CNOT2-217ENST00000549443 CCDC180Q9P1Z9 1646 aa15.37■□□□□ 0.05
CNOT2-217ENST00000549443 KCNA4P22459 653 aa15.32■□□□□ 0.04
CNOT2-217ENST00000549443 MAPK8IP2Q13387 824 aaPredicted RBP15.23■□□□□ 0.03
CNOT2-217ENST00000549443 NCBP3Q53F19 620 aaKnown RBP15.21■□□□□ 0.03
CNOT2-217ENST00000549443 CNKSR2Q8WXI2 1034 aa15.11■□□□□ 0.01
CNOT2-217ENST00000549443 ABCC9O60706 1549 aa15.08■□□□□ 0.01
CNOT2-217ENST00000549443 NPM3O75607 178 aaKnown RBP14.96□□□□□ -0.01
CNOT2-217ENST00000549443 DMRT2Q9Y5R5 561 aa14.96□□□□□ -0.01
CNOT2-217ENST00000549443 RNF216Q9NWF9 866 aaPredicted RBP14.78□□□□□ -0.04
CNOT2-217ENST00000549443 DCAF8L2P0C7V8 631 aa14.74□□□□□ -0.05
CNOT2-217ENST00000549443 HOXD11P31277 338 aaPredicted RBP14.68□□□□□ -0.06
CNOT2-217ENST00000549443 ZCCHC6Q5VYS8 1495 aaKnown RBP14.64□□□□□ -0.07
CNOT2-217ENST00000549443 SLC4A1APQ9BWU0 796 aaKnown RBP14.63□□□□□ -0.07
CNOT2-217ENST00000549443 NACADO15069 1562 aa14.47□□□□□ -0.09
CNOT2-217ENST00000549443 DCAF1Q9Y4B6 1507 aa14.47□□□□□ -0.09
CNOT2-217ENST00000549443 MYO15BQ96JP2 1530 aa14.45□□□□□ -0.1
CNOT2-217ENST00000549443 RB1CC1Q8TDY2 1594 aa14.43□□□□□ -0.1
CNOT2-217ENST00000549443 DCAF8L1A6NGE4 600 aa14.42□□□□□ -0.1
CNOT2-217ENST00000549443 DNAJC5BQ9UF47 199 aa14.42□□□□□ -0.1
CNOT2-217ENST00000549443 POTEDQ86YR6 584 aa14.41□□□□□ -0.1
CNOT2-217ENST00000549443 EHMT2Q96KQ7 1210 aa14.35□□□□□ -0.11
CNOT2-217ENST00000549443 PABPN1Q86U42 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
CNOT2-217ENST00000549443 UNC13AQ9UPW8 1703 aa14.18□□□□□ -0.14
CNOT2-217ENST00000549443 SCRIBQ14160 1630 aa14.17□□□□□ -0.14
CNOT2-217ENST00000549443 BICRAQ9NZM4 1560 aa14.16□□□□□ -0.14
CNOT2-217ENST00000549443 SHROOM4Q9ULL8 1493 aa14.12□□□□□ -0.15
CNOT2-217ENST00000549443 SLC4A2P04920 1241 aa14.08□□□□□ -0.16
CNOT2-217ENST00000549443 CSRNP3Q8WYN3 585 aa14.08□□□□□ -0.16
CNOT2-217ENST00000549443 FOXD4L1Q9NU39 408 aa14.08□□□□□ -0.16
CNOT2-217ENST00000549443 ZBTB22O15209 634 aa14.07□□□□□ -0.16
CNOT2-217ENST00000549443 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.06□□□□□ -0.166e-8■■■■□ 21.8
CNOT2-217ENST00000549443 MYCNP04198 464 aaPredicted RBP13.83□□□□□ -0.2
CNOT2-217ENST00000549443 CECR2Q9BXF3 1484 aa13.8□□□□□ -0.2
CNOT2-217ENST00000549443 U3KPZ7 1027 aaPredicted RBP13.79□□□□□ -0.2
CNOT2-217ENST00000549443 RNF39Q9H2S5 420 aa13.7□□□□□ -0.22
CNOT2-217ENST00000549443 EIF4G1Q04637 1599 aaKnown RBP13.68□□□□□ -0.22
CNOT2-217ENST00000549443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.68□□□□□ -0.22
CNOT2-217ENST00000549443 HNRNPUL2Q1KMD3 747 aaKnown RBP13.68□□□□□ -0.22
CNOT2-217ENST00000549443 MROH2BQ7Z745 1585 aa13.63□□□□□ -0.23
CNOT2-217ENST00000549443 SAMD1Q6SPF0 538 aaPredicted RBP13.63□□□□□ -0.23
CNOT2-217ENST00000549443 CC2D2AQ9P2K1 1620 aa13.6□□□□□ -0.23
CNOT2-217ENST00000549443 RSF1Q96T23 1441 aaPredicted RBP13.56□□□□□ -0.24
CNOT2-217ENST00000549443 SMARCA4P51532 1647 aa13.55□□□□□ -0.24
CNOT2-217ENST00000549443 ATXN8OSP0DMR3 200 aa13.55□□□□□ -0.24
CNOT2-217ENST00000549443 C1QBPQ07021 282 aaKnown RBP13.55□□□□□ -0.24
CNOT2-217ENST00000549443 APLP2Q06481 763 aa13.53□□□□□ -0.24
CNOT2-217ENST00000549443 BAZ1AQ9NRL2 1556 aaPredicted RBP13.52□□□□□ -0.25
CNOT2-217ENST00000549443 ATAD2BQ9ULI0 1458 aa13.51□□□□□ -0.25
CNOT2-217ENST00000549443 NCAPD3P42695 1498 aa13.46□□□□□ -0.25
CNOT2-217ENST00000549443 WIZO95785 1651 aa13.45□□□□□ -0.26
CNOT2-217ENST00000549443 ATF5Q9Y2D1 282 aaPredicted RBP13.45□□□□□ -0.26
CNOT2-217ENST00000549443 PEG3Q9GZU2 1588 aa13.41□□□□□ -0.26
CNOT2-217ENST00000549443 SPINK5Q9NQ38 1064 aaPredicted RBP13.4□□□□□ -0.26
CNOT2-217ENST00000549443 SUPT5HO00267 1087 aaKnown RBP13.39□□□□□ -0.27
CNOT2-217ENST00000549443 CAPN15O75808 1086 aa13.39□□□□□ -0.27
CNOT2-217ENST00000549443 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
CNOT2-217ENST00000549443 TRHP20396 242 aaPredicted RBP13.35□□□□□ -0.27
CNOT2-217ENST00000549443 CACNB1Q02641 598 aaPredicted RBP13.35□□□□□ -0.27
CNOT2-217ENST00000549443 ZNF219Q9P2Y4 722 aaPredicted RBP13.32□□□□□ -0.28
CNOT2-217ENST00000549443 BAZ1BQ9UIG0 1483 aaKnown RBP13.31□□□□□ -0.28
CNOT2-217ENST00000549443 HMGXB3Q12766 1538 aa13.29□□□□□ -0.28
CNOT2-217ENST00000549443 TOP2AP11388 1531 aaKnown RBP13.22□□□□□ -0.29
CNOT2-217ENST00000549443 CCDC88BA6NC98 1476 aa13.2□□□□□ -0.3
CNOT2-217ENST00000549443 NESP48681 1621 aa13.17□□□□□ -0.3
CNOT2-217ENST00000549443 ABCB7O75027 752 aa13.13□□□□□ -0.31
CNOT2-217ENST00000549443 POLA2Q14181 598 aa13.12□□□□□ -0.31
CNOT2-217ENST00000549443 CADPSQ9ULU8 1353 aa13.09□□□□□ -0.31
CNOT2-217ENST00000549443 DSG3P32926 999 aa13.08□□□□□ -0.32
CNOT2-217ENST00000549443 CFTRP13569 1480 aa13.04□□□□□ -0.32
CNOT2-217ENST00000549443 LAMC3Q9Y6N6 1575 aa12.96□□□□□ -0.33
CNOT2-217ENST00000549443 FBLN2P98095 1184 aa12.92□□□□□ -0.34
CNOT2-217ENST00000549443 ZBTB12Q9Y330 459 aaPredicted RBP12.91□□□□□ -0.34
CNOT2-217ENST00000549443 PDS5BQ9NTI5 1447 aa12.9□□□□□ -0.34
CNOT2-217ENST00000549443 FANCD2Q9BXW9 1451 aa12.9□□□□□ -0.34
CNOT2-217ENST00000549443 KIF21AQ7Z4S6 1674 aa12.87□□□□□ -0.35
CNOT2-217ENST00000549443 ERCC6Q03468 1493 aa12.85□□□□□ -0.35
CNOT2-217ENST00000549443 MKRN4PQ13434 485 aaPredicted RBP12.85□□□□□ -0.35
CNOT2-217ENST00000549443 URB2Q14146 1524 aaKnown RBP12.82□□□□□ -0.36
CNOT2-217ENST00000549443 CEP164Q9UPV0 1460 aa12.8□□□□□ -0.36
CNOT2-217ENST00000549443 THOC2Q8NI27 1593 aaKnown RBP12.77□□□□□ -0.36
CNOT2-217ENST00000549443 FKBP8Q14318 412 aa12.77□□□□□ -0.37
CNOT2-217ENST00000549443 MRC2Q9UBG0 1479 aa12.77□□□□□ -0.37
CNOT2-217ENST00000549443 ABCC8Q09428 1581 aa12.75□□□□□ -0.37
CNOT2-217ENST00000549443 PRDM2Q13029 1718 aa12.75□□□□□ -0.37
CNOT2-217ENST00000549443 CUX1P39880 1505 aa12.74□□□□□ -0.37
CNOT2-217ENST00000549443 TOPBP1Q92547 1522 aa12.72□□□□□ -0.37
CNOT2-217ENST00000549443 WDR62O43379 1518 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms