RNA–Protein interactions for RNA: ENST00000422866.1

PEX1-202, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 5

Gene PEX1, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-202ENST00000422866 AEBP2Q6ZN18 517 aaPredicted RBP21.73■■□□□ 1.07
PEX1-202ENST00000422866 CHIC1Q5VXU3 224 aa20.62■□□□□ 0.89
PEX1-202ENST00000422866 SENP3Q9H4L4 574 aaPredicted RBP18.53■□□□□ 0.56
PEX1-202ENST00000422866 PHF23Q9BUL5 403 aaPredicted RBP18.3■□□□□ 0.52
PEX1-202ENST00000422866 FOXD1Q16676 465 aa17.28■□□□□ 0.36
PEX1-202ENST00000422866 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
PEX1-202ENST00000422866 MSH5O43196 834 aa16.16■□□□□ 0.18
PEX1-202ENST00000422866 PPP6R1Q9UPN7 881 aa16.16■□□□□ 0.18
PEX1-202ENST00000422866 PIAS4Q8N2W9 510 aaPredicted RBP16.15■□□□□ 0.18
PEX1-202ENST00000422866 ADRA2BP18089 450 aa16.12■□□□□ 0.17
PEX1-202ENST00000422866 POTEDQ86YR6 584 aa15.79■□□□□ 0.12
PEX1-202ENST00000422866 MAPK8IP2Q13387 824 aaPredicted RBP14.8□□□□□ -0.04
PEX1-202ENST00000422866 SCAF1Q9H7N4 1312 aaKnown RBP14.74□□□□□ -0.05
PEX1-202ENST00000422866 DMRT2Q9Y5R5 561 aa14.69□□□□□ -0.06
PEX1-202ENST00000422866 PPP4R3CPQ6ZMV5 832 aa14.51□□□□□ -0.09
PEX1-202ENST00000422866 CNKSR2Q8WXI2 1034 aa14.18□□□□□ -0.14
PEX1-202ENST00000422866 NCBP3Q53F19 620 aaKnown RBP14.15□□□□□ -0.14
PEX1-202ENST00000422866 HOXD11P31277 338 aaPredicted RBP14.14□□□□□ -0.15
PEX1-202ENST00000422866 DCAF8L1A6NGE4 600 aa14.13□□□□□ -0.15
PEX1-202ENST00000422866 KCNA4P22459 653 aa14.06□□□□□ -0.16
PEX1-202ENST00000422866 RNF216Q9NWF9 866 aaPredicted RBP14.04□□□□□ -0.16
PEX1-202ENST00000422866 NPM3O75607 178 aaKnown RBP13.9□□□□□ -0.18
PEX1-202ENST00000422866 CACNB1Q02641 598 aaPredicted RBP13.9□□□□□ -0.18
PEX1-202ENST00000422866 RNF39Q9H2S5 420 aa13.79□□□□□ -0.2
PEX1-202ENST00000422866 DNAJC5BQ9UF47 199 aa13.63□□□□□ -0.23
PEX1-202ENST00000422866 C1QBPQ07021 282 aaKnown RBP13.59□□□□□ -0.23
PEX1-202ENST00000422866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.5□□□□□ -0.25
PEX1-202ENST00000422866 SLC4A1APQ9BWU0 796 aaKnown RBP13.4□□□□□ -0.26
PEX1-202ENST00000422866 U3KPZ7 1027 aaPredicted RBP13.2□□□□□ -0.3
PEX1-202ENST00000422866 SLC4A2P04920 1241 aa13.13□□□□□ -0.31
PEX1-202ENST00000422866 SPINK5Q9NQ38 1064 aaPredicted RBP13.03□□□□□ -0.32
PEX1-202ENST00000422866 CAPN15O75808 1086 aa13.02□□□□□ -0.33
PEX1-202ENST00000422866 FOXD4L1Q9NU39 408 aa13□□□□□ -0.33
PEX1-202ENST00000422866 ZBTB22O15209 634 aa12.92□□□□□ -0.34
PEX1-202ENST00000422866 DSG3P32926 999 aa12.92□□□□□ -0.34
PEX1-202ENST00000422866 EHMT2Q96KQ7 1210 aa12.91□□□□□ -0.34
PEX1-202ENST00000422866 MYCNP04198 464 aaPredicted RBP12.87□□□□□ -0.35
PEX1-202ENST00000422866 APLP2Q06481 763 aa12.84□□□□□ -0.35
PEX1-202ENST00000422866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.82□□□□□ -0.36
PEX1-202ENST00000422866 HNRNPUL2Q1KMD3 747 aaKnown RBP12.82□□□□□ -0.36
PEX1-202ENST00000422866 TRHP20396 242 aaPredicted RBP12.81□□□□□ -0.36
PEX1-202ENST00000422866 CSRNP3Q8WYN3 585 aa12.79□□□□□ -0.36
PEX1-202ENST00000422866 ZNF219Q9P2Y4 722 aaPredicted RBP12.76□□□□□ -0.37
PEX1-202ENST00000422866 SAMD1Q6SPF0 538 aaPredicted RBP12.75□□□□□ -0.37
PEX1-202ENST00000422866 ABCB7O75027 752 aa12.72□□□□□ -0.37
PEX1-202ENST00000422866 ATXN8OSP0DMR3 200 aa12.57□□□□□ -0.4
PEX1-202ENST00000422866 ATF5Q9Y2D1 282 aaPredicted RBP12.47□□□□□ -0.41
PEX1-202ENST00000422866 POLA2Q14181 598 aa12.46□□□□□ -0.41
PEX1-202ENST00000422866 POTEHQ6S545 545 aa12.38□□□□□ -0.43
PEX1-202ENST00000422866 RBM42Q9BTD8 480 aaKnown RBP12.33□□□□□ -0.44
PEX1-202ENST00000422866 ZBTB12Q9Y330 459 aaPredicted RBP12.19□□□□□ -0.46
PEX1-202ENST00000422866 CHRDL2Q6WN34 429 aa12.06□□□□□ -0.48
PEX1-202ENST00000422866 OSCARQ8IYS5 282 aa12.05□□□□□ -0.48
PEX1-202ENST00000422866 AKT1S1Q96B36 256 aa12.04□□□□□ -0.48
PEX1-202ENST00000422866 FBLN2P98095 1184 aa12.03□□□□□ -0.48
PEX1-202ENST00000422866 MKRN4PQ13434 485 aaPredicted RBP11.94□□□□□ -0.5
PEX1-202ENST00000422866 REM2Q8IYK8 340 aaPredicted RBP11.94□□□□□ -0.5
PEX1-202ENST00000422866 SPDYE2BA6NHP3 402 aa11.81□□□□□ -0.52
PEX1-202ENST00000422866 PITPNM1O00562 1244 aa11.81□□□□□ -0.52
PEX1-202ENST00000422866 SPDYE6P0CI01 402 aa11.81□□□□□ -0.52
PEX1-202ENST00000422866 SPDYE2Q495Y8 402 aa11.81□□□□□ -0.52
PEX1-202ENST00000422866 PIP4P2Q8N4L2 257 aa11.78□□□□□ -0.52
PEX1-202ENST00000422866 FXR2P51116 673 aaKnown RBP eCLIP11.7□□□□□ -0.54
PEX1-202ENST00000422866 ZNF692Q9BU19 519 aaPredicted RBP11.69□□□□□ -0.54
PEX1-202ENST00000422866 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
PEX1-202ENST00000422866 SSUH2Q9Y2M2 353 aa11.64□□□□□ -0.55
PEX1-202ENST00000422866 CLEC11AQ9Y240 323 aa11.62□□□□□ -0.55
PEX1-202ENST00000422866 SPDYE1Q8NFV5 336 aaPredicted RBP11.61□□□□□ -0.55
PEX1-202ENST00000422866 SP7Q8TDD2 431 aaPredicted RBP11.6□□□□□ -0.55
PEX1-202ENST00000422866 HAX1O00165 279 aa11.59□□□□□ -0.55
PEX1-202ENST00000422866 FKBP8Q14318 412 aa11.59□□□□□ -0.55
PEX1-202ENST00000422866 PABPN1Q86U42 306 aaKnown RBP eCLIP11.53□□□□□ -0.56
PEX1-202ENST00000422866 PRKAR2AP13861 404 aaKnown RBP11.52□□□□□ -0.57
PEX1-202ENST00000422866 PROM2Q8N271 834 aa11.45□□□□□ -0.58
PEX1-202ENST00000422866 EVX2Q03828 476 aa11.43□□□□□ -0.58
PEX1-202ENST00000422866 PRR29P0C7W0 189 aa11.42□□□□□ -0.58
PEX1-202ENST00000422866 CHADLQ6NUI6 762 aa11.4□□□□□ -0.58
PEX1-202ENST00000422866 STAG3Q9UJ98 1225 aa11.37□□□□□ -0.59
PEX1-202ENST00000422866 C19orf67A6NJJ6 358 aa11.32□□□□□ -0.6
PEX1-202ENST00000422866 FBXO3Q9UK99 471 aa11.25□□□□□ -0.61
PEX1-202ENST00000422866 FARP1Q9Y4F1 1045 aaPredicted RBP11.2□□□□□ -0.62
PEX1-202ENST00000422866 GABBR2O75899 941 aa11.17□□□□□ -0.62
PEX1-202ENST00000422866 CD44P16070 742 aaKnown RBP11.15□□□□□ -0.62
PEX1-202ENST00000422866 CREBZFQ9NS37 354 aa11.12□□□□□ -0.63
PEX1-202ENST00000422866 MIER1Q8N108 512 aa11.09□□□□□ -0.63
PEX1-202ENST00000422866 PLEKHG5O94827 1062 aa11.07□□□□□ -0.64
PEX1-202ENST00000422866 VASPP50552 380 aaPredicted RBP11.07□□□□□ -0.64
PEX1-202ENST00000422866 PLCD3Q8N3E9 789 aa11.06□□□□□ -0.64
PEX1-202ENST00000422866 ZRANB1Q9UGI0 708 aa11□□□□□ -0.65
PEX1-202ENST00000422866 ZBTB47Q9UFB7 747 aaPredicted RBP10.98□□□□□ -0.65
PEX1-202ENST00000422866 CLCN6P51797 869 aa10.97□□□□□ -0.65
PEX1-202ENST00000422866 MNX1P50219 401 aaPredicted RBP10.95□□□□□ -0.66
PEX1-202ENST00000422866 ZNF579Q8NAF0 562 aaKnown RBP10.95□□□□□ -0.66
PEX1-202ENST00000422866 NPM1P06748 294 aaKnown RBP eCLIP10.94□□□□□ -0.66
PEX1-202ENST00000422866 POTEIP0CG38 1075 aa10.93□□□□□ -0.66
PEX1-202ENST00000422866 PAK3O75914 559 aaPredicted RBP10.91□□□□□ -0.66
PEX1-202ENST00000422866 KLHL34Q8N239 644 aa10.9□□□□□ -0.66
PEX1-202ENST00000422866 LHX8Q68G74 356 aa10.89□□□□□ -0.67
PEX1-202ENST00000422866 IFNLR1Q8IU57 520 aaPredicted RBP10.88□□□□□ -0.67
PEX1-202ENST00000422866 DCBLD2Q96PD2 775 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 222.6 ms