RNA–Protein interactions for RNA: ENST00000469299.1

COMTD1-203, Transcript of catechol-O-methyltransferase domain containing 1, humanhuman

TSL 3

Gene COMTD1, Length 871 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMTD1-203ENST00000469299 NISCHQ9Y2I1 1504 aa54.77■■■■■ 6.36
COMTD1-203ENST00000469299 CCDC180Q9P1Z9 1646 aa49.2■■■■■ 5.47
COMTD1-203ENST00000469299 ABCC9O60706 1549 aa48.99■■■■■ 5.43
COMTD1-203ENST00000469299 RB1CC1Q8TDY2 1594 aa46.64■■■■■ 5.06
COMTD1-203ENST00000469299 NACADO15069 1562 aa46.34■■■■■ 5.01
COMTD1-203ENST00000469299 UNC13AQ9UPW8 1703 aa45.97■■■■■ 4.95
COMTD1-203ENST00000469299 DCAF8L2P0C7V8 631 aa45.97■■■■■ 4.95
COMTD1-203ENST00000469299 DNAJC5BQ9UF47 199 aa45.85■■■■■ 4.93
COMTD1-203ENST00000469299 MYO15BQ96JP2 1530 aa45.69■■■■■ 4.9
COMTD1-203ENST00000469299 PABPN1Q86U42 306 aaKnown RBP eCLIP45.55■■■■■ 4.88
COMTD1-203ENST00000469299 BICRAQ9NZM4 1560 aa45.46■■■■■ 4.87
COMTD1-203ENST00000469299 ZCCHC6Q5VYS8 1495 aaKnown RBP45.46■■■■■ 4.87
COMTD1-203ENST00000469299 DCAF1Q9Y4B6 1507 aa45.2■■■■■ 4.83
COMTD1-203ENST00000469299 SCRIBQ14160 1630 aa44.87■■■■■ 4.77
COMTD1-203ENST00000469299 SHROOM4Q9ULL8 1493 aa44.59■■■■■ 4.73
COMTD1-203ENST00000469299 CC2D2AQ9P2K1 1620 aa44.34■■■■■ 4.69
COMTD1-203ENST00000469299 EIF4G1Q04637 1599 aaKnown RBP44.23■■■■■ 4.67
COMTD1-203ENST00000469299 CECR2Q9BXF3 1484 aa44.06■■■■■ 4.64
COMTD1-203ENST00000469299 SMARCA4P51532 1647 aa42.79■■■■■ 4.44
COMTD1-203ENST00000469299 NCAPD3P42695 1498 aa42.73■■■■■ 4.43
COMTD1-203ENST00000469299 ATAD2BQ9ULI0 1458 aa42.68■■■■■ 4.42
COMTD1-203ENST00000469299 SMARCA2P51531 1590 aa42.55■■■■■ 4.4
COMTD1-203ENST00000469299 HMGXB3Q12766 1538 aa42.51■■■■■ 4.4
COMTD1-203ENST00000469299 BAZ1AQ9NRL2 1556 aaPredicted RBP42.48■■■■■ 4.39
COMTD1-203ENST00000469299 PEG3Q9GZU2 1588 aa42.31■■■■■ 4.36
COMTD1-203ENST00000469299 MROH2BQ7Z745 1585 aa42.28■■■■■ 4.36
COMTD1-203ENST00000469299 BAZ1BQ9UIG0 1483 aaKnown RBP42.25■■■■■ 4.35
COMTD1-203ENST00000469299 NESP48681 1621 aa42.2■■■■■ 4.35
COMTD1-203ENST00000469299 ERCC6Q03468 1493 aa42.18■■■■■ 4.34
COMTD1-203ENST00000469299 CUX2O14529 1486 aa42.07■■■■■ 4.33
COMTD1-203ENST00000469299 WIZO95785 1651 aa41.87■■■■■ 4.29
COMTD1-203ENST00000469299 DNAJC5Q9H3Z4 198 aa41.83■■■■■ 4.29
COMTD1-203ENST00000469299 LAMC3Q9Y6N6 1575 aa41.82■■■■■ 4.29
COMTD1-203ENST00000469299 THOC2Q8NI27 1593 aaKnown RBP41.81■■■■■ 4.28
COMTD1-203ENST00000469299 KIF21AQ7Z4S6 1674 aa41.79■■■■■ 4.28
COMTD1-203ENST00000469299 PDS5BQ9NTI5 1447 aa41.43■■■■■ 4.22
COMTD1-203ENST00000469299 CADPSQ9ULU8 1353 aa41.4■■■■■ 4.22
COMTD1-203ENST00000469299 RSF1Q96T23 1441 aaPredicted RBP41.35■■■■■ 4.21
COMTD1-203ENST00000469299 TOP2AP11388 1531 aaKnown RBP41.23■■■■■ 4.19
COMTD1-203ENST00000469299 MRC2Q9UBG0 1479 aa41.19■■■■■ 4.18
COMTD1-203ENST00000469299 WDR62O43379 1518 aa41.15■■■■■ 4.18
COMTD1-203ENST00000469299 CEP164Q9UPV0 1460 aa41.04■■■■■ 4.16
COMTD1-203ENST00000469299 CFTRP13569 1480 aa41.02■■■■■ 4.16
COMTD1-203ENST00000469299 FANCD2Q9BXW9 1451 aa41.02■■■■■ 4.16
COMTD1-203ENST00000469299 PRDM2Q13029 1718 aa40.93■■■■■ 4.14
COMTD1-203ENST00000469299 URB2Q14146 1524 aaKnown RBP40.77■■■■■ 4.12
COMTD1-203ENST00000469299 CCDC88BA6NC98 1476 aa40.72■■■■■ 4.11
COMTD1-203ENST00000469299 TOPBP1Q92547 1522 aa40.32■■■■■ 4.04
COMTD1-203ENST00000469299 ZNF608Q9ULD9 1512 aaPredicted RBP40.25■■■■■ 4.03
COMTD1-203ENST00000469299 DNMBPQ6XZF7 1577 aa40.18■■■■■ 4.02
COMTD1-203ENST00000469299 IFT140Q96RY7 1462 aa40.18■■■■■ 4.02
COMTD1-203ENST00000469299 TRIM41Q8WV44 630 aa40.09■■■■■ 4.01
COMTD1-203ENST00000469299 EIF4G3O43432 1585 aaKnown RBP40.09■■■■■ 4.01
COMTD1-203ENST00000469299 ABCC8Q09428 1581 aa40.05■■■■■ 4
COMTD1-203ENST00000469299 TARBP1Q13395 1621 aaKnown RBP40.03■■■■■ 4
COMTD1-203ENST00000469299 OSCARQ8IYS5 282 aa40.03■■■■■ 4
COMTD1-203ENST00000469299 POLA1P09884 1462 aaPredicted RBP39.9■■■■□ 3.98
COMTD1-203ENST00000469299 CHD1O14646 1710 aa39.88■■■■□ 3.97
COMTD1-203ENST00000469299 RIMBP3CA6NJZ7 1639 aa39.83■■■■□ 3.97
COMTD1-203ENST00000469299 RIMBP3BA6NNM3 1639 aa39.83■■■■□ 3.97
COMTD1-203ENST00000469299 RIMBP3Q9UFD9 1639 aa39.83■■■■□ 3.97
COMTD1-203ENST00000469299 AQRO60306 1485 aaKnown RBP eCLIP39.81■■■■□ 3.964e-7■■■■□ 19.7
COMTD1-203ENST00000469299 RAD54L2Q9Y4B4 1467 aa39.78■■■■□ 3.96
COMTD1-203ENST00000469299 CUX1P39880 1505 aa39.72■■■■□ 3.95
COMTD1-203ENST00000469299 FGD5Q6ZNL6 1462 aa39.68■■■■□ 3.94
COMTD1-203ENST00000469299 ARHGEF11O15085 1522 aa39.62■■■■□ 3.93
COMTD1-203ENST00000469299 SOGA1O94964 1423 aa39.61■■■■□ 3.93
COMTD1-203ENST00000469299 WDR97A6NE52 1622 aa39.58■■■■□ 3.93
COMTD1-203ENST00000469299 TDRD9Q8NDG6 1382 aaKnown RBP39.56■■■■□ 3.92
COMTD1-203ENST00000469299 SUPT5HO00267 1087 aaKnown RBP39.52■■■■□ 3.92
COMTD1-203ENST00000469299 SNAPC4Q5SXM2 1469 aa39.45■■■■□ 3.91
COMTD1-203ENST00000469299 PBRM1Q86U86 1689 aa39.41■■■■□ 3.9
COMTD1-203ENST00000469299 FBLN2P98095 1184 aa39.38■■■■□ 3.89
COMTD1-203ENST00000469299 ARAP1Q96P48 1450 aa39.28■■■■□ 3.88
COMTD1-203ENST00000469299 CLASP1Q7Z460 1538 aa39.28■■■■□ 3.88
COMTD1-203ENST00000469299 GRIN2BQ13224 1484 aa39.27■■■■□ 3.88
COMTD1-203ENST00000469299 MAGI1Q96QZ7 1491 aaPredicted RBP39.27■■■■□ 3.88
COMTD1-203ENST00000469299 ABCA5Q8WWZ7 1642 aa39.26■■■■□ 3.88
COMTD1-203ENST00000469299 ABCA10Q8WWZ4 1543 aa39.19■■■■□ 3.86
COMTD1-203ENST00000469299 GAPVD1Q14C86 1478 aa39.17■■■■□ 3.86
COMTD1-203ENST00000469299 BIVM-ERCC5R4GMW8 1640 aa39.17■■■■□ 3.86
COMTD1-203ENST00000469299 SYNJ1O43426 1573 aa39.16■■■■□ 3.86
COMTD1-203ENST00000469299 CYB5RLQ6IPT4 315 aa39.16■■■■□ 3.86
COMTD1-203ENST00000469299 SYNJ2O15056 1496 aa39.14■■■■□ 3.86
COMTD1-203ENST00000469299 TOP2BQ02880 1626 aa39.09■■■■□ 3.85
COMTD1-203ENST00000469299 CHMP7Q8WUX9 453 aaPredicted RBP39.07■■■■□ 3.85
COMTD1-203ENST00000469299 WRNQ14191 1432 aaPredicted RBP eCLIP38.96■■■■□ 3.83
COMTD1-203ENST00000469299 ADAMTS12P58397 1594 aa38.94■■■■□ 3.82
COMTD1-203ENST00000469299 GRIN2AQ12879 1464 aa38.83■■■■□ 3.81
COMTD1-203ENST00000469299 CEP170Q5SW79 1584 aa38.81■■■■□ 3.8
COMTD1-203ENST00000469299 ERCC6L2Q5T890 1561 aa38.77■■■■□ 3.8
COMTD1-203ENST00000469299 ERICH3Q5RHP9 1530 aa38.69■■■■□ 3.78
COMTD1-203ENST00000469299 NUP160Q12769 1436 aa38.68■■■■□ 3.78
COMTD1-203ENST00000469299 FHAD1B1AJZ9 1412 aa38.64■■■■□ 3.78
COMTD1-203ENST00000469299 TRHP20396 242 aaPredicted RBP38.63■■■■□ 3.77
COMTD1-203ENST00000469299 SHROOM2Q13796 1616 aa38.63■■■■□ 3.77
COMTD1-203ENST00000469299 RUSC2Q8N2Y8 1516 aa38.4■■■■□ 3.74
COMTD1-203ENST00000469299 PRG4Q92954 1404 aaPredicted RBP38.25■■■■□ 3.71
COMTD1-203ENST00000469299 CUL7Q14999 1698 aa38.23■■■■□ 3.71
COMTD1-203ENST00000469299 IGF1RP08069 1367 aa38.17■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms